Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000084 A 20 16 36 G 20 30 50 000085 C 9 8 17 T 31 38 69 000290 A 1 0 1 G 43 46 89 000353 A 4 8 12 C 40 38 78 000437 G 13 6 19 A 33 40 73 000870 G 0 1 1 A 46 43 89 001031 - 0 4 4 + 44 30 74 001037 - 12 2 14 + 34 32 66 001332 C 12 28 40 A 34 18 52 001362 A 1 0 1 G 45 46 91 001711 C 1 0 1 T 47 46 93 001728 G 0 1 1 T 48 45 93 001844 A 1 0 1 G 47 46 93 001865 A 1 0 1 C 47 46 93 001999 A 2 0 2 G 46 46 92 002207 A 0 6 6 G 48 40 88 002358 C 5 0 5 A 41 46 87 002412 A 1 0 1 G 45 46 91 002482 A 0 3 3 G 46 43 89 002518 A 1 0 1 G 45 46 91 002573 A 1 0 1 G 47 46 93 002801 T 1 0 1 C 43 40 83 002837 - 6 0 6 + 38 40 78 002856 A 1 9 10 C 43 33 76 002913 C 1 9 10 T 43 31 74 003003 C 4 38 42 T 44 8 52 003394 A 0 1 1 C 48 45 93 003691 A 5 0 5 G 41 40 81 003902 T 13 0 13 G 35 46 81 004432 C 3 8 11 G 43 36 79 004831 C 2 0 2 T 44 44 88 004988 G 1 0 1 A 47 44 91 005142 C 11 4 15 G 37 40 77 005281 A 2 11 13 G 42 25 67 006063 A 9 21 30 G 35 25 60 006126 A 3 8 11 G 45 38 83 006218 T 1 14 15 A 47 32 79 006287 A 1 0 1 G 47 46 93 006515 A 2 17 19 G 44 27 71 006519 T 3 8 11 C 43 36 79 006529 T 1 0 1 C 45 44 89 006560 G 6 8 14 C 40 36 76 006707 C 20 19 39 T 26 27 53 006740 T 2 14 16 C 46 32 78 006830 T 0 6 6 C 46 40 86 007185 C 18 15 33 T 26 31 57 007207 G 1 19 20 C 41 27 68 007337 T 1 0 1 C 45 46 91 007631 T 0 1 1 A 44 45 89 007790 G 6 14 20 A 36 32 68 007827 T 0 8 8 C 42 38 80 007887 T 3 0 3 A 39 46 85 008499 G 16 21 37 A 24 23 47 008696 G 6 14 20 A 42 32 74 008738 G 5 13 18 T 41 31 72 009060 A 17 2 19 G 29 40 69 009412 T 16 15 31 A 22 25 47 009413 C 13 15 28 A 19 25 44 009427 A 18 9 27 G 18 31 49 010031 C 4 0 4 T 42 46 88 010296 T 0 3 3 C 34 43 77 010606 A 17 15 32 C 21 31 52 010675 T 2 1 3 C 36 45 81 010715 T 1 0 1 G 37 46 83 010738 T 7 0 7 G 31 44 75 010751 T 13 28 41 C 25 16 41 010766 T 2 1 3 C 36 41 77 010767 A 1 8 9 G 37 34 71 010991 A 2 2 4 C 46 44 90 011087 A 0 10 10 G 48 36 84 011292 G 0 1 1 A 48 45 93 011310 T 0 10 10 C 48 36 84 011422 A 8 10 18 G 40 36 76 011484 G 4 0 4 C 44 46 90 011584 C 0 7 7 G 46 39 85 011770 T 1 0 1 G 41 40 81 011833 T 8 0 8 C 34 40 74 011839 T 0 1 1 C 42 39 81 011898 T 8 10 18 C 40 36 76 012020 A 0 1 1 G 46 43 89 012052 G 0 1 1 A 46 43 89 012184 T 6 9 15 C 40 35 75 012223 A 3 0 3 G 43 44 87 012227 T 6 0 6 G 40 44 84 012240 A 8 9 17 C 38 35 73 012253 T 1 0 1 C 45 44 89 012272 A 8 0 8 G 38 44 82 012326 G 3 0 3 A 43 44 87 012335 T 16 12 28 C 30 34 64 012483 T 0 8 8 C 38 36 74 012774 T 0 1 1 G 44 33 77 012779 C 10 10 20 T 34 26 60 013779 A 15 12 27 G 33 32 65 013961 C 1 0 1 T 47 44 91 014177 G 6 10 16 C 26 34 60 014281 T 1 0 1 C 31 44 75 014411 T 0 1 1 C 32 43 75 014627 G 9 9 18 C 39 35 74 014997 C 7 10 17 A 39 36 75 015098 G 2 10 12 C 44 36 80 015142 A 7 10 17 G 39 36 75 015724 T 1 0 1 G 45 46 91 016074 A 1 0 1 G 45 44 89 016108 A 3 0 3 G 41 42 83 016254 T 0 3 3 C 44 37 81 016294 A 0 1 1 G 44 39 83 016409 T 19 25 44 C 29 21 50 016867 A 1 0 1 G 47 44 91 017380 G 0 1 1 A 48 45 93 017497 C 6 3 9 T 42 43 85 017846 + 20 26 46 - 28 20 48 018077 C 4 0 4 T 44 46 90 018093 T 27 19 46 G 21 27 48 018489 A 3 0 3 G 43 46 89 018529 T 0 1 1 C 46 45 91 019036 A 1 0 1 G 47 46 93 019199 G 1 0 1 A 47 46 93 019341 A 27 20 47 G 21 26 47 019396 A 6 3 9 G 40 43 83 019559 A 2 3 5 G 46 43 89 019882 G 4 0 4 A 44 46 90 020183 G 0 1 1 T 48 45 93 020299 A 0 1 1 G 48 45 93 020321 A 1 0 1 G 47 46 93 020434 T 1 0 1 C 47 46 93 020464 A 0 1 1 G 48 45 93 020733 A 27 20 47 G 21 26 47 020893 A 4 0 4 G 44 46 90 021224 A 9 23 32 T 33 23 56 021366 A 21 12 33 G 21 34 55 021822 - 4 0 4 + 42 44 86 021892 C 0 1 1 A 40 43 83 024618 T 26 18 44 C 22 26 48 024662 C 3 0 3 G 45 46 91 025188 C 3 0 3 A 45 46 91 027865 T 1 0 1 A 47 46 93 028197 T 17 26 43 G 31 20 51 028592 G 3 0 3 A 41 46 87 028610 C 12 3 15 T 32 43 75 028654 A 2 0 2 G 42 46 88 029096 T 0 1 1 C 48 39 87 029528 G 17 23 40 T 25 23 48 029762 A 0 1 1 G 44 45 89 029868 C 17 19 36 A 23 27 50 029879 G 2 0 2 A 40 46 86 029914 A 1 0 1 G 37 46 83 030060 C 4 3 7 A 38 43 81 030066 C 18 22 40 T 24 24 48 030128 A 1 0 1 G 41 46 87 030144 C 15 19 34 G 25 25 50 030285 A 0 1 1 G 46 45 91 030520 A 4 0 4 T 44 46 90 030595 C 9 0 9 T 39 46 85 030658 G 6 0 6 A 34 46 80 030745 G 11 3 14 T 29 43 72 031010 A 3 0 3 G 45 44 89 031053 C 4 0 4 T 44 46 90 031259 * 031290 - 3 8 11 + 45 38 83 031400 A 1 0 1 T 47 46 93 031485 T 23 5 28 C 25 41 66 031652 - 0 7 7 + 48 39 87 031726 T 0 1 1 C 48 45 93 032328 A 1 0 1 G 47 46 93 032719 C 14 5 19 G 32 39 71 032886 A 3 0 3 G 39 42 81 033439 T 0 1 1 C 46 45 91 033878 G 4 0 4 A 44 46 90 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001031: agg 001037: ggg 002837: tg 017846: C 021822: at 031290: aagaatggtgtgggagagg 031652: tcctccct Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 031259 T 4 5 9 A 18 9 27 C 26 32 58