Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000072 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 000111 CC 0 0 0 CT 1 0 1 TT 23 23 46 0.011 0.000 0.005 000149 AA 4 2 6 AG 5 9 14 GG 15 12 27 5.359 0.028 3.072 000208 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 000653 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 000994 CC 11 22 33 CT 9 0 9 TT 2 0 2 0.007 0.000 1.550 001038 CC 22 19 41 CT 0 3 3 TT 0 1 1 0.000 2.457 5.985 001039 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 001096 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 001233 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 001668 AA 7 0 7 AG 6 1 7 GG 9 21 30 4.455 0.012 13.906 002007 AA 0 6 6 AG 4 10 14 GG 11 7 18 0.355 0.381 1.252 002378 -- 6 0 6 +- 7 0 7 ++ 11 23 34 3.654 0.000 13.616 002425 CC 18 22 40 CT 4 0 4 TT 0 0 0 0.220 0.000 0.100 002688 AA 22 23 45 AT 1 0 1 TT 0 0 0 0.011 0.000 0.006 002790 AA 1 9 10 AT 6 10 16 TT 16 4 20 0.195 0.175 3.349 003303 CC 0 0 0 CG 0 5 5 GG 17 18 35 0.000 0.342 0.178 003736 AA 10 2 12 AG 7 10 17 GG 0 10 10 1.143 0.050 0.618 003974 AA 7 0 7 AC 6 1 7 CC 8 19 27 3.834 0.013 12.489 004021 AA 0 0 0 AG 1 2 3 GG 20 20 40 0.012 0.050 0.056 004102 AA 14 12 26 AC 6 8 14 CC 1 1 2 0.114 0.053 0.004 004118 AA 1 0 1 AC 1 1 2 CC 19 21 40 8.629 0.012 9.727 004275 CC 0 0 0 CT 1 0 1 TT 20 20 40 0.012 0.000 0.006 004871 CC 5 21 26 CG 6 1 7 GG 8 0 8 2.358 0.012 13.650 004957 CC 12 23 35 CT 9 0 9 TT 3 0 3 0.389 0.000 3.846 004983 AA 0 0 0 AG 2 0 2 GG 22 23 45 0.045 0.000 0.022 005034 AA 0 0 0 AG 0 2 2 GG 24 21 45 0.000 0.048 0.022 005079 AA 24 18 42 AC 0 5 5 CC 0 0 0 0.000 0.342 0.148 005341 CC 1 0 1 CT 1 1 2 TT 21 22 43 9.521 0.011 10.478 005569 CC 23 22 45 CG 0 1 1 GG 0 0 0 0.000 0.011 0.006 006303 CC 23 22 45 CT 1 1 2 TT 0 0 0 0.011 0.011 0.022 007324 AA 0 0 0 AG 1 0 1 GG 23 20 43 0.011 0.000 0.006 007325 CC 4 2 6 CT 6 7 13 TT 14 11 25 3.744 0.299 3.295 007332 CC 9 19 28 CT 8 1 9 TT 7 0 7 2.593 0.013 9.729 008631 CC 9 22 31 CT 6 0 6 TT 2 0 2 0.382 0.000 3.791 008777 CC 22 21 43 CT 1 1 2 TT 1 0 1 9.967 0.012 10.478 009404 CC 19 22 41 CT 4 0 4 TT 0 0 0 0.209 0.000 0.097 009531 AA 0 6 6 AG 4 8 12 GG 19 7 26 0.209 1.173 4.297 009735 AA 7 0 7 AG 7 1 8 GG 9 22 31 3.439 0.011 12.538 009894 CC 19 23 42 CT 4 0 4 TT 0 0 0 0.209 0.000 0.095 009923 AA 0 0 0 AG 0 1 1 GG 23 22 45 0.000 0.011 0.006 011116 AA 11 23 34 AG 6 0 6 GG 7 0 7 5.662 0.000 18.004 011787 -- 1 11 12 +- 7 10 17 ++ 16 2 18 0.044 0.017 3.291 011793 CC 0 0 0 CT 1 1 2 TT 23 22 45 0.011 0.011 0.022 011822 AA 8 0 8 AG 7 1 8 GG 9 22 31 4.146 0.011 14.341 012127 -- 0 0 0 +- 0 4 4 ++ 24 17 41 0.000 0.233 0.097 012134 CC 23 17 40 CG 1 0 1 GG 0 0 0 0.011 0.000 0.006 012301 AA 1 7 8 AG 8 8 16 GG 15 2 17 0.003 0.016 1.328 012345 CC 5 2 7 CT 6 8 14 TT 13 9 22 4.594 0.012 2.876 012384 AA 0 0 0 AG 2 0 2 GG 22 20 42 0.045 0.000 0.024 012825 AA 13 11 24 AG 6 9 15 GG 5 2 7 4.594 0.007 2.754 012832 AA 13 9 22 AC 6 9 15 CC 5 2 7 4.594 0.013 2.298 012841 CC 15 2 17 CT 6 10 16 TT 1 10 11 0.153 0.050 2.950 012860 CC 5 2 7 CT 6 9 15 TT 13 11 24 4.594 0.007 2.754 012992 AA 13 11 24 AG 6 8 14 GG 5 2 7 4.594 0.093 3.383 013082 AA 7 0 7 AG 6 0 6 GG 11 21 32 5.662 0.000 16.981 013184 CC 1 0 1 CT 1 1 2 TT 22 20 42 9.967 0.012 10.228 013286 CC 13 11 24 CG 6 8 14 GG 5 2 7 4.594 0.093 3.383 013354 CC 13 11 24 CT 6 8 14 TT 5 2 7 4.594 0.093 3.383 013439 AA 13 10 23 AG 5 6 11 GG 5 4 9 5.874 2.321 7.866 013449 AA 0 0 0 AG 0 5 5 GG 21 15 36 0.000 0.408 0.173 013468 CC 12 10 22 CT 5 6 11 TT 4 4 8 4.121 2.321 6.319 014261 AA 0 0 0 AG 1 0 1 GG 23 21 44 0.011 0.000 0.006 014568 -- 21 18 39 +- 1 0 1 ++ 0 0 0 0.012 0.000 0.006 015028 CC 14 12 26 CT 6 9 15 TT 4 2 6 3.744 0.028 2.286 015071 AA 21 23 44 AG 3 0 3 GG 0 0 0 0.107 0.000 0.051 015100 GG 0 0 0 GT 1 2 3 TT 23 21 44 0.011 0.048 0.051 015106 GG 23 23 46 GT 1 0 1 TT 0 0 0 0.011 0.000 0.005 015336 AA 0 0 0 AG 1 0 1 GG 22 22 44 0.011 0.000 0.006 015382 AA 1 9 10 AG 7 10 17 GG 15 3 18 0.025 0.007 2.174 015400 CC 23 21 44 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 015954 CC 20 22 42 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 015988 AA 9 22 31 AG 9 0 9 GG 3 0 3 0.093 0.000 3.210 016404 CC 0 0 0 CT 2 0 2 TT 20 23 43 0.050 0.000 0.023 016442 AA 20 17 37 AT 2 6 8 TT 0 0 0 0.050 0.517 0.428 017227 CC 18 22 40 CT 6 0 6 TT 0 0 0 0.490 0.000 0.224 017755 CC 23 21 44 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 017893 CC 0 0 0 CT 0 5 5 TT 22 17 39 0.000 0.362 0.160 017922 AA 2 1 3 AG 9 13 22 GG 13 7 20 0.061 2.545 0.889 018090 CC 18 19 37 CT 3 0 3 TT 0 0 0 0.124 0.000 0.061 018290 AA 0 0 0 AG 3 0 3 GG 12 20 32 0.185 0.000 0.070 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 002378: AG 011787: T 012127: t 014568: CTGCT