Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000938 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000954 00000 ------------ C 0.86 0.69 0.78 T 0.14 0.31 0.22 0000 --- --- --- --- 001047 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001152 00000 ------------ G 0.71 0.89 0.81 A 0.29 0.11 0.19 0000 --- --- --- --- 001258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001555 00000 ------------ G 0.89 0.89 0.89 A 0.11 0.11 0.11 0000 --- --- --- --- 001690 00000 ------------ G 0.63 0.57 0.60 C 0.37 0.43 0.40 0000 --- --- --- --- 001888 00102 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001974 00000 ------------ C 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 002154 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002157 00000 ------------ A 0.79 0.93 0.86 G 0.21 0.07 0.14 0000 --- --- --- --- 002328 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002425 00000 ------------ G 0.82 0.95 0.89 C 0.18 0.05 0.11 0000 --- --- --- --- 002570 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003058 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003068 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003117 00000 ------------ A 0.76 0.93 0.85 G 0.24 0.07 0.15 0000 --- --- --- --- 003150 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 003233 00226 5' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003243 00236 5' UTR A 0.89 0.96 0.93 G 0.11 0.04 0.07 0000 --- --- --- --- 003346 00339 NON-SYN C 0.83 0.95 0.89 T 0.17 0.05 0.11 0020 CTC TTC LEU(L) PHE(F) 003349 00342 NON-SYN A 0.95 1.00 0.98 G 0.05 0.00 0.02 0021 AGT GGT SER(S) GLY(G) 003374 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003927 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004136 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004152 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 004160 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004781 00000 ------------ G 0.84 0.95 0.89 C 0.16 0.05 0.11 0000 --- --- --- --- 004973 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005391 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006317 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 006406 00000 ------------ A 0.82 0.65 0.73 G 0.17 0.35 0.27 0000 --- --- --- --- 006656 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 006750 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006795 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006865 00000 ------------ C 0.91 0.98 0.95 T 0.09 0.02 0.05 0000 --- --- --- --- 008008 00000 ------------ C 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 008012 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008308 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 008367 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008390 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008417 00000 ------------ A 0.79 0.91 0.85 T 0.21 0.09 0.15 0000 --- --- --- --- 008486 00000 ------------ A 0.90 0.67 0.79 G 0.10 0.33 0.21 0000 --- --- --- --- 008501 00000 ------------ G 0.65 0.85 0.74 A 0.35 0.15 0.26 0000 --- --- --- --- 008588 00000 ------------ T 0.85 0.67 0.77 C 0.15 0.33 0.23 0000 --- --- --- --- 008659 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009116 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009170 00000 ------------ C 0.91 0.70 0.80 T 0.09 0.30 0.20 0000 --- --- --- --- 009172 00000 ------------ C 0.82 0.91 0.87 T 0.18 0.09 0.13 0000 --- --- --- --- 009180 00000 ------------ C 0.77 0.46 0.61 T 0.23 0.54 0.39 0000 --- --- --- --- 009271 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 009274 00000 ------------ C 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 009299 00000 ------------ G 0.70 0.91 0.81 A 0.30 0.09 0.19 0000 --- --- --- --- 009337 00000 ------------ A 0.77 0.46 0.61 C 0.23 0.54 0.39 0000 --- --- --- --- 009517 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009538 00000 ------------ T 0.89 0.95 0.93 A 0.11 0.05 0.07 0000 --- --- --- --- 009586 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 009718 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009742 00000 ------------ C 0.78 0.46 0.62 T 0.22 0.54 0.38 0000 --- --- --- --- 010142 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010168 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 010205 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 010400 00517 NON-SYN T 0.94 1.00 0.97 C 0.06 0.00 0.03 0079 CTG CCG LEU(L) PRO(P) 010515 00632 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0117 GCC GCT ALA(A) ALA(A) 010544 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010592 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010630 00000 ------------ A 0.82 0.95 0.89 G 0.18 0.05 0.11 0000 --- --- --- --- 010781 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011443 00644 TRUNCATION C 0.92 0.89 0.90 A 0.08 0.11 0.10 0121 TAC TAA TYR(Y) *** 011567 00768 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0163 CGG TGG ARG(R) TRP(W) 011614 00815 SYNON G 0.73 1.00 0.86 A 0.27 0.00 0.14 0178 GAG GAA GLU(E) GLU(E) 011678 00879 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0200 GAC AAC ASP(D) ASN(N) 011776 00977 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0232 TAC TAT TYR(Y) TYR(Y) 011793 00994 NON-SYN A 0.96 1.00 0.98 C 0.04 0.00 0.02 0238 CAG CCG GLN(Q) PRO(P) 011823 01024 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0248 ACT ATT THR(T) ILE(I) 011950 01151 SYNON C 0.97 0.89 0.92 T 0.03 0.11 0.08 0290 GGC GGT GLY(G) GLY(G) 011951 01152 NON-SYN A 0.94 1.00 0.97 T 0.06 0.00 0.03 0291 ATC TTC ILE(I) PHE(F) 012218 01419 3' UTR - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 012329 01530 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012383 01584 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012632 01833 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012636 01837 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013115 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 013221 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 013243 00000 ------------ A 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 013326 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 013666 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013775 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004160: T 009586: TC 012218: T