Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000212 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000242 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000258 00000 ------------ G 0.72 1.00 0.85 T 0.28 0.00 0.15 0000 --- --- --- --- 000642 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000682 00000 ------------ G 0.71 0.78 0.74 A 0.29 0.23 0.26 0000 --- --- --- --- 000898 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000904 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000991 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001543 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001851 00000 ------------ G 0.83 0.44 0.67 A 0.17 0.56 0.33 0000 --- --- --- --- 001965 00016 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001995 00046 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002042 00093 5' UTR C 0.94 1.00 0.96 T 0.06 0.00 0.04 0000 --- --- --- --- 002044 00095 5' UTR C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 002053 00104 5' UTR C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 002544 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002668 00000 ------------ G 0.40 0.78 0.59 A 0.60 0.22 0.41 0000 --- --- --- --- 002992 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003043 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003125 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003203 00000 ------------ C 0.42 0.85 0.63 T 0.58 0.15 0.37 0000 --- --- --- --- 003505 00000 ------------ C 0.42 0.85 0.63 T 0.58 0.15 0.37 0000 --- --- --- --- 003661 00000 ------------ T 0.87 0.85 0.86 C 0.13 0.15 0.14 0000 --- --- --- --- 004113 00000 ------------ G 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 004281 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004307 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 004347 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004532 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004581 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004609 00000 ------------ G 0.42 0.85 0.63 A 0.58 0.15 0.37 0000 --- --- --- --- 004613 00000 ------------ A 0.42 0.85 0.63 T 0.58 0.15 0.37 0000 --- --- --- --- 004614 00000 ------------ T 0.42 0.85 0.63 G 0.58 0.15 0.37 0000 --- --- --- --- 004615 00000 ------------ T 0.42 0.85 0.63 A 0.58 0.15 0.37 0000 --- --- --- --- 004649 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005116 00758 SYNON T 0.89 1.00 0.94 C 0.11 0.00 0.06 0202 CGT CGC ARG(R) ARG(R) 005131 00773 SYNON C 1.00 0.93 0.97 T 0.00 0.07 0.03 0207 GCC GCT ALA(A) ALA(A) 005234 00876 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0242 GGC AGC GLY(G) SER(S) 005353 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005520 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005911 00000 ------------ A 0.81 0.33 0.57 C 0.19 0.67 0.43 0000 --- --- --- --- 006143 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006411 00000 ------------ T 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 006505 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006582 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006756 00000 ------------ G 0.81 0.34 0.59 A 0.19 0.66 0.41 0000 --- --- --- --- 007317 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007536 00000 ------------ T 0.72 0.83 0.77 C 0.28 0.17 0.23 0000 --- --- --- --- 007543 00000 ------------ C 0.65 0.65 0.65 A 0.35 0.35 0.35 0000 --- --- --- --- 007625 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007744 00000 ------------ C 0.68 0.65 0.67 A 0.32 0.35 0.33 0000 --- --- --- --- 007782 00000 ------------ G 0.71 0.65 0.68 A 0.29 0.35 0.32 0000 --- --- --- --- 007936 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008035 00000 ------------ C 0.71 0.65 0.68 G 0.29 0.35 0.32 0000 --- --- --- --- 008098 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008210 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008464 00000 ------------ T 0.71 0.63 0.67 C 0.29 0.37 0.33 0000 --- --- --- --- 008470 00000 ------------ G 0.71 0.63 0.67 C 0.29 0.37 0.33 0000 --- --- --- --- 008485 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 008500 00000 ------------ C 0.71 0.63 0.67 T 0.29 0.37 0.33 0000 --- --- --- --- 008692 00000 ------------ C 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 008833 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009205 00000 ------------ C 0.88 0.36 0.61 T 0.12 0.64 0.39 0000 --- --- --- --- 009292 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009580 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009642 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009993 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010228 00000 ------------ G 0.77 0.39 0.59 A 0.23 0.61 0.41 0000 --- --- --- --- 010633 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010694 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010836 00000 ------------ G 0.76 0.78 0.77 A 0.24 0.22 0.23 0000 --- --- --- --- 010942 00000 ------------ T 0.53 0.57 0.55 C 0.47 0.43 0.45 0000 --- --- --- --- 010985 00000 ------------ T 0.53 0.57 0.55 C 0.47 0.43 0.45 0000 --- --- --- --- 011184 00000 ------------ C 0.53 0.57 0.55 A 0.47 0.43 0.45 0000 --- --- --- --- 011204 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 011230 00000 ------------ G 0.65 0.40 0.52 C 0.35 0.60 0.48 0000 --- --- --- --- 011387 00000 ------------ - 0.72 0.81 0.77 + 0.28 0.19 0.23 0000 --- --- --- --- 012773 00000 ------------ G 0.62 0.36 0.50 C 0.38 0.64 0.50 0000 --- --- --- --- 012817 00000 ------------ T 0.75 0.83 0.79 G 0.25 0.17 0.21 0000 --- --- --- --- 012865 00000 ------------ T 0.45 0.64 0.54 C 0.55 0.36 0.46 0000 --- --- --- --- 012868 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 013075 00000 ------------ T 0.57 0.78 0.67 C 0.43 0.22 0.33 0000 --- --- --- --- 013295 00000 ------------ A 0.74 0.78 0.76 T 0.26 0.22 0.24 0000 --- --- --- --- 013731 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013757 00000 ------------ C 0.60 0.80 0.70 G 0.40 0.20 0.30 0000 --- --- --- --- 013921 00000 ------------ C 0.88 0.88 0.88 T 0.12 0.12 0.12 0000 --- --- --- --- 013992 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014004 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 014059 00000 ------------ T 0.62 0.45 0.54 G 0.38 0.55 0.46 0000 --- --- --- --- 014066 00000 ------------ C 0.90 0.85 0.88 A 0.10 0.15 0.12 0000 --- --- --- --- 014098 00000 ------------ T 0.88 0.85 0.87 G 0.12 0.15 0.13 0000 --- --- --- --- 014147 00000 ------------ - 0.74 0.85 0.79 + 0.26 0.15 0.21 0000 --- --- --- --- 014309 00000 ------------ - 0.69 0.78 0.73 + 0.31 0.22 0.27 0000 --- --- --- --- 014317 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014385 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014508 00000 ------------ T 0.71 0.80 0.76 C 0.29 0.20 0.24 0000 --- --- --- --- 014550 00000 ------------ T 0.90 0.80 0.85 G 0.10 0.20 0.15 0000 --- --- --- --- 014627 00000 ------------ - 0.85 0.78 0.82 + 0.15 0.22 0.18 0000 --- --- --- --- 015140 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 015423 00000 ------------ G 0.85 0.78 0.82 A 0.15 0.22 0.18 0000 --- --- --- --- 015470 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 015653 00000 ------------ C 0.74 0.78 0.76 T 0.26 0.22 0.24 0000 --- --- --- --- 015894 00000 ------------ T 0.62 0.78 0.70 C 0.38 0.22 0.30 0000 --- --- --- --- 016106 00000 ------------ C 0.72 0.78 0.75 T 0.28 0.22 0.25 0000 --- --- --- --- 016217 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016597 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 016628 00000 ------------ C 0.63 0.78 0.71 T 0.37 0.22 0.29 0000 --- --- --- --- 016727 00000 ------------ C 0.87 0.96 0.91 T 0.13 0.04 0.09 0000 --- --- --- --- 016800 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 016828 00000 ------------ - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 017101 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 017416 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 017471 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017565 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 017598 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 018286 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018591 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018806 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018833 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018873 00000 ------------ A 0.89 0.43 0.67 G 0.11 0.57 0.33 0000 --- --- --- --- 018899 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 019052 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 019361 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 019407 00000 ------------ A 0.84 0.78 0.81 G 0.16 0.23 0.19 0000 --- --- --- --- 019517 00000 ------------ C 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 019847 00000 ------------ C 0.88 0.45 0.67 A 0.12 0.55 0.33 0000 --- --- --- --- 019966 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020393 01406 SYNON G 0.98 0.96 0.97 A 0.02 0.04 0.03 0418 ACG ACA THR(T) THR(T) 020564 01577 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020988 02001 3' UTR A 0.89 0.80 0.84 G 0.11 0.20 0.16 0000 --- --- --- --- 021083 02096 3' UTR A 0.63 0.80 0.71 G 0.37 0.20 0.29 0000 --- --- --- --- 021537 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002992: C 004649: A 011387: AAC 014147: T 014309: AACAAAA 014627: A 016828: T