Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 002296 AA 3 13 16 AG 7 7 14 GG 10 1 11 0.818 0.002 3.858 002440 CC 20 20 40 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 002561 AA 0 0 0 AG 1 0 1 GG 18 21 39 0.014 0.000 0.006 002644 AA 0 0 0 AG 1 0 1 GG 21 21 42 0.012 0.000 0.006 002769 CC 19 19 38 CG 3 4 7 GG 0 0 0 0.118 0.209 0.320 002887 AA 0 0 0 AG 6 0 6 GG 16 23 39 0.548 0.000 0.230 002971 AA 0 0 0 AG 8 0 8 GG 14 23 37 1.086 0.000 0.428 004541 AA 0 0 0 AG 3 5 8 GG 21 18 39 0.107 0.342 0.407 005308 CC 5 0 5 CT 14 5 19 TT 5 18 23 0.667 0.342 0.130 005360 CC 21 18 39 CG 3 5 8 GG 0 0 0 0.107 0.342 0.407 007409 AA 0 0 0 AG 1 0 1 GG 19 21 40 0.013 0.000 0.006 007415 CC 0 0 0 CT 2 0 2 TT 18 21 39 0.055 0.000 0.026 007535 CC 19 21 40 CT 1 0 1 TT 0 0 0 0.013 0.000 0.006 007617 AA 4 0 4 AG 12 3 15 GG 4 18 22 0.800 0.124 0.359 007701 GG 3 0 3 GT 12 0 12 TT 5 21 26 0.900 0.000 0.872 007722 AA 4 18 22 AG 12 3 15 GG 4 0 4 0.800 0.124 0.359 007787 CC 4 18 22 CT 12 3 15 TT 4 0 4 0.800 0.124 0.359 007913 AA 6 0 6 AG 12 4 16 GG 5 19 24 0.048 0.209 1.467 008334 -- 0 0 0 +- 11 3 14 ++ 10 18 28 2.644 0.124 1.680 008354 CC 4 0 4 CG 10 3 13 GG 5 18 23 0.059 0.124 1.032 008612 CC 0 0 0 CT 3 0 3 TT 5 18 23 0.426 0.000 0.097 009267 -- 11 21 32 +- 8 0 8 ++ 0 0 0 1.351 0.000 0.494 009584 CC 19 20 39 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 009723 CC 6 0 6 CT 11 0 11 TT 6 23 29 0.043 0.000 6.039 009732 AA 6 23 29 AG 11 0 11 GG 6 0 6 0.043 0.000 6.039 009740 AA 6 0 6 AC 11 0 11 CC 6 23 29 0.043 0.000 6.039 009821 CC 6 0 6 CT 12 0 12 TT 6 23 29 0.000 0.000 5.074 009952 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 010138 AA 6 0 6 AC 11 0 11 CC 7 23 30 0.160 0.000 6.324 010229 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 010287 CC 6 23 29 CT 12 0 12 TT 6 0 6 0.000 0.000 5.074 012402 CC 7 0 7 CT 10 0 10 TT 6 23 29 0.381 0.000 8.755 012409 AA 7 0 7 AC 10 0 10 CC 6 23 29 0.381 0.000 8.755 012434 -- 6 22 28 +- 10 0 10 ++ 7 0 7 0.381 0.000 8.391 012450 AA 6 23 29 AT 0 0 0 TT 7 0 7 13.000 0.000 36.000 012456 AA 7 0 7 AG 0 0 0 GG 6 23 29 13.000 0.000 36.000 012487 CC 6 22 28 CT 0 0 0 TT 7 0 7 13.000 0.000 35.000 012535 AA 7 0 7 AG 0 0 0 GG 6 21 27 13.000 0.000 34.000 012555 AA 7 0 7 AT 0 0 0 TT 6 21 27 13.000 0.000 34.000 012556 AA 7 0 7 AT 0 0 0 TT 6 21 27 13.000 0.000 34.000 013353 -- 19 22 41 +- 3 0 3 ++ 0 0 0 0.118 0.000 0.055 013361 AA 7 0 7 AT 10 0 10 TT 5 23 28 0.153 0.000 8.391 013369 AA 10 23 33 AT 12 0 12 TT 0 0 0 3.094 0.000 1.065 013411 CC 6 23 29 CT 10 0 10 TT 7 0 7 0.381 0.000 8.755 013475 CC 7 0 7 CT 10 0 10 TT 6 23 29 0.381 0.000 8.755 013479 CC 6 22 28 CT 10 1 11 TT 7 0 7 0.381 0.011 7.207 013491 CC 7 0 7 CT 10 0 10 TT 5 23 28 0.153 0.000 8.391 013507 CC 5 23 28 CT 10 0 10 TT 7 0 7 0.153 0.000 8.391 013508 AA 7 0 7 AG 10 0 10 GG 5 23 28 0.153 0.000 8.391 013689 AA 6 23 29 AG 10 0 10 GG 8 0 8 0.621 0.000 10.308 015812 AA 15 21 36 AG 9 0 9 GG 0 0 0 1.278 0.000 0.556 016191 AA 0 0 0 AG 2 0 2 GG 21 22 43 0.048 0.000 0.023 016280 AA 0 0 0 AT 12 0 12 TT 12 22 34 2.667 0.000 1.035 016303 AA 0 0 0 AG 3 0 3 GG 21 22 43 0.107 0.000 0.052 016513 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 017275 CC 12 23 35 CT 8 0 8 TT 0 0 0 1.250 0.000 0.452 017563 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 017606 CC 7 0 7 CT 10 0 10 TT 6 23 29 0.381 0.000 8.755 017721 GG 7 0 7 GT 8 0 8 TT 8 23 31 2.112 0.000 12.538 018032 CC 8 0 8 CT 7 0 7 TT 8 23 31 3.522 0.000 16.242 018403 CC 19 17 36 CG 0 3 3 GG 0 0 0 0.000 0.131 0.062 018425 CC 1 0 1 CG 0 0 0 GG 18 21 39 19.000 0.000 40.000 018514 AA 5 0 5 AC 8 0 8 CC 7 21 28 0.737 0.000 7.601 021063 -- 8 19 27 +- 11 3 14 ++ 2 1 3 0.416 2.457 0.390 021339 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 021375 GG 0 0 0 GT 15 0 15 TT 9 23 32 4.959 0.000 1.694 021463 AA 1 1 2 AG 14 3 17 GG 9 19 28 2.344 2.457 0.084 021521 CC 0 0 0 CT 0 1 1 TT 24 22 46 0.000 0.011 0.005 023452 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 023582 AA 0 0 0 AG 0 2 2 GG 23 21 44 0.000 0.048 0.023 024609 CC 22 19 41 CG 0 4 4 GG 0 0 0 0.000 0.209 0.097 024712 CC 3 4 7 CG 15 10 25 GG 4 9 13 2.954 0.175 0.775 024749 CC 4 9 13 CG 15 10 25 GG 3 4 7 2.954 0.175 0.775 024776 CC 3 4 7 CT 15 10 25 TT 4 9 13 2.954 0.175 0.775 024890 AA 21 23 44 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 025021 AA 2 4 6 AG 15 10 25 GG 4 9 13 4.096 0.175 1.211 025066 CC 2 4 6 CT 16 10 26 TT 4 9 13 4.791 0.175 1.527 025165 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 025207 CC 14 11 25 CT 7 8 15 TT 2 4 6 0.616 1.252 2.100 025229 CC 23 22 45 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 025278 AA 4 9 13 AG 17 10 27 GG 2 4 6 5.512 0.175 1.872 025330 CC 22 21 43 CT 0 2 2 TT 0 0 0 0.000 0.048 0.023 025331 AA 0 0 0 AG 7 0 7 GG 15 23 38 0.787 0.000 0.320 025589 AA 4 11 15 AG 17 10 27 GG 2 2 4 5.512 0.017 2.764 025810 AA 2 2 4 AG 18 10 28 GG 4 11 15 6.254 0.017 3.190 025859 AA 2 2 4 AG 18 10 28 GG 3 11 14 7.425 0.017 3.549 025861 CC 3 11 14 CT 18 10 28 TT 2 2 4 7.425 0.017 3.549 026036 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 026158 CC 2 2 4 CT 17 11 28 TT 4 10 14 5.512 0.179 3.549 026243 AA 0 0 0 AG 0 1 1 GG 23 22 45 0.000 0.011 0.006 026255 CC 4 10 14 CT 17 11 28 TT 2 2 4 5.512 0.179 3.549 026315 CC 5 10 15 CT 17 11 28 TT 2 2 4 4.629 0.179 3.190 026370 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 026389 AA 3 10 13 AG 19 11 30 GG 2 2 4 8.244 0.179 4.970 026637 AA 0 0 0 AC 1 0 1 CC 23 23 46 0.011 0.000 0.005 026645 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 026649 AA 0 0 0 AG 12 0 12 GG 12 23 35 2.667 0.000 1.007 026847 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 026942 -- 4 10 14 +- 18 11 29 ++ 2 2 4 6.254 0.179 4.023 027068 AA 0 0 0 AG 1 0 1 GG 18 17 35 0.014 0.000 0.007 027098 AA 2 2 4 AG 13 7 20 GG 4 8 12 2.798 0.060 1.026 027140 CC 4 8 12 CT 13 7 20 TT 2 2 4 2.798 0.060 1.026 027161 CC 2 2 4 CT 13 7 20 TT 4 8 12 2.798 0.060 1.026 027226 CC 4 8 12 CG 13 7 20 GG 2 2 4 2.798 0.060 1.026 027269 -- 0 0 0 +- 1 0 1 ++ 19 17 36 0.013 0.000 0.007 027338 CC 0 0 0 CG 1 0 1 GG 23 21 44 0.011 0.000 0.006 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 008334: T 009267: ctTTT 012434: AG 013353: A 021063: GTTTT 026942: C 027269: CTCA