Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000167 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000543 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 000748 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001059 00000 ------------ A 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 001150 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001204 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 002046 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002351 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002377 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002817 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 002843 00000 ------------ - 0.58 0.46 0.52 + 0.42 0.54 0.48 0000 --- --- --- --- 003959 00000 ------------ A 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 005181 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005230 00000 ------------ A 0.58 1.00 0.79 G 0.42 0.00 0.21 0000 --- --- --- --- 005704 00000 ------------ C 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 005705 00000 ------------ T 0.62 1.00 0.81 C 0.38 0.00 0.19 0000 --- --- --- --- 006174 00000 ------------ T 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 006307 00000 ------------ A 0.65 1.00 0.82 T 0.35 0.00 0.18 0000 --- --- --- --- 006369 00000 ------------ T 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 006425 00000 ------------ A 0.65 1.00 0.83 G 0.35 0.00 0.17 0000 --- --- --- --- 006723 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007130 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007687 00000 ------------ T 0.52 1.00 0.74 C 0.48 0.00 0.26 0000 --- --- --- --- 007785 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007911 00000 ------------ A 0.62 1.00 0.80 G 0.38 0.00 0.20 0000 --- --- --- --- 007918 00000 ------------ G 0.62 1.00 0.80 A 0.38 0.00 0.20 0000 --- --- --- --- 007934 00000 ------------ C 0.62 1.00 0.80 T 0.38 0.00 0.20 0000 --- --- --- --- 007966 00000 ------------ A 0.52 1.00 0.74 G 0.48 0.00 0.26 0000 --- --- --- --- 008319 00000 ------------ G 0.62 1.00 0.81 A 0.38 0.00 0.19 0000 --- --- --- --- 008382 00000 ------------ G 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 008554 00000 ------------ G 0.62 1.00 0.81 A 0.38 0.00 0.19 0000 --- --- --- --- 008730 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008767 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008781 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008867 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008961 00000 ------------ C 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 009028 00000 ------------ - 0.62 1.00 0.81 + 0.38 0.00 0.19 0000 --- --- --- --- 009224 00000 ------------ G 0.50 1.00 0.74 A 0.50 0.00 0.26 0000 --- --- --- --- 009341 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009350 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 009566 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 009634 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009849 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009890 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 009972 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 010120 00000 ------------ G 0.58 0.46 0.52 A 0.42 0.54 0.48 0000 --- --- --- --- 010177 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 010266 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 010408 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 010525 00051 5' UTR T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010544 00070 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0004 CCG CCA PRO(P) PRO(P) 010674 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010687 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 010905 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011328 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 012061 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 013013 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013509 00379 SYNON T 0.79 1.00 0.89 C 0.21 0.00 0.11 0107 GCT GCC ALA(A) ALA(A) 013884 00000 ------------ A 0.62 1.00 0.80 T 0.38 0.00 0.20 0000 --- --- --- --- 014248 00494 NON-SYN G 1.00 0.97 0.99 A 0.00 0.03 0.01 0146 GTG ATG VAL(V) MET(M) 014408 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 014829 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 014839 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014904 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 014960 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 015022 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015932 00000 ------------ A 1.00 0.92 0.96 G 0.00 0.08 0.04 0000 --- --- --- --- 015952 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 016049 00000 ------------ G 0.71 0.60 0.66 C 0.29 0.40 0.34 0000 --- --- --- --- 016286 00817 SYNON G 0.89 1.00 0.94 A 0.11 0.00 0.06 0253 TTG TTA LEU(L) LEU(L) 016415 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017179 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 017406 00000 ------------ C 0.58 0.46 0.52 G 0.42 0.54 0.48 0000 --- --- --- --- 017480 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017744 01102 SYNON C 1.00 0.98 0.99 G 0.00 0.02 0.01 0348 GCC GCG ALA(A) ALA(A) 017939 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018280 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 018324 01138 SYNON T 0.76 1.00 0.88 C 0.24 0.00 0.12 0360 CTT CTC LEU(L) LEU(L) 018835 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019350 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 019822 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 019996 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020191 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 020237 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020346 01486 SYNON C 0.71 0.57 0.64 T 0.29 0.43 0.36 0476 CCC CCT PRO(P) PRO(P) 020479 01619 NON-SYN G 0.88 1.00 0.94 A 0.12 0.00 0.06 0521 GCC ACC ALA(A) THR(T) 020630 01770 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0571 CGC CAC ARG(R) HIS(H) 020733 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 021281 00000 ------------ G 0.74 1.00 0.87 T 0.26 0.00 0.13 0000 --- --- --- --- 021297 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 021788 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 021983 02160 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0701 CCG CTG PRO(P) LEU(L) 021984 02161 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0701 CCG CCA PRO(P) PRO(P) 023040 02630 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0858 GCA ACA ALA(A) THR(T) 023049 02639 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0861 GTG ATG VAL(V) MET(M) 023306 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 023384 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023438 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 023493 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 023530 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023596 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 023634 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023980 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024587 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024728 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024819 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 024965 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025017 00000 ------------ A 0.62 1.00 0.81 G 0.38 0.00 0.19 0000 --- --- --- --- 025582 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 025630 02716 SYNON C 0.81 1.00 0.90 T 0.19 0.00 0.10 0886 GAC GAT ASP(D) ASP(D) 025673 02759 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0901 CGG TGG ARG(R) TRP(W) 025787 02873 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0939 CGG TGG ARG(R) TRP(W) 025788 02874 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0939 CGG CAG ARG(R) GLN(Q) 025868 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026395 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 026449 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 026749 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026811 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 026823 00000 ------------ C 0.83 0.74 0.79 G 0.17 0.26 0.21 0000 --- --- --- --- 027779 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027821 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028030 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028267 00000 ------------ C 0.43 0.61 0.52 A 0.57 0.39 0.48 0000 --- --- --- --- 028502 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 028794 00000 ------------ C 0.59 0.48 0.53 T 0.41 0.52 0.47 0000 --- --- --- --- 029039 00000 ------------ G 0.71 0.66 0.68 T 0.29 0.34 0.32 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000543: GCCACCACGCTCAGCTAATTTTTGTATTTTTAGTAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTTCAACTCCCGACCTCATGATCCACCCGCCTCGGCCTCA 002817: G 002843: CAA 009028: G 018280: CCC 020733: A 021297: TGATCTCTG 023493: TG