LOCUS AF468959 6382 bp DNA linear PRI 29-JAN-2002 DEFINITION Homo sapiens fibrinogen-like 2 (FGL2) gene, complete cds. ACCESSION AF468959 VERSION AF468959.1 GI:18390110 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6382) AUTHORS Rieder,M.J., Armel,T.Z., Carrington,D.P., Chung,M.-W., Lee,K.L., Poel,C.L., Ozuna,M., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (15-JAN-2002) Molecular Biotechnology, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: SeattleSNPs. NHLBI Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.mbt.washington.edu). FEATURES Location/Qualifiers source 1..6382 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" repeat_region 63..150 /rpt_family="MIR" /rpt_type=dispersed variation 180 /frequency="0.45" /replace="a" variation 706 /frequency="0.08" /replace="c" variation 809 /frequency="0.22" /replace="a" variation 902 /frequency="0.01" /replace="g" variation 1255 /frequency="0.01" /replace="g" variation 1271 /frequency="0.01" /replace="c" variation 1300 /frequency="0.07" /replace="c" gene 1431..5083 /gene="FGL2" mRNA join(1431..2077,4273..5083) /gene="FGL2" /product="fibrinogen-like 2" CDS join(1465..2077,4273..4979) /gene="FGL2" /codon_start=1 /product="fibrinogen-like 2" /protein_id="AAL68855.1" /db_xref="GI:18390111" /translation="MKLANWYWLSSAVLATYGFLVVANNETEEIKDERAKDVCPVRLE SRGKCEEAGECPYQVSLPPLTIQLPKQFSRIEEVFKEVQNLKEIVNSLKKSCQDCKLQ ADDNGDPGRNGLLLPSTGAPGEVGDNRVRELESEVNKLSSELKNAKEEINVLHGRLEK LNLVNMNNIENYVDSKVANLTFVVNSLDGKCSKCPSQEQIQSRPVQHLIYKDCSDYYA IGKRSSETYRVTPDPKNSSFEVYCDMETMGGGWTVLQARLDGSTNFTRTWQDYKAGFG NLRREFWLGNDKIHLLTKSKEMILRIDLEDFNGVELYALYDQFYVANEFLKYRLHVGN YNGTAGDALRFNKHYNHDLKFFTTPDKDNDRYPSGNCGLYYSSGWWFDACLSANLNGK YYHQKYRGVRNGIFWGTWPGVSEAHPGGYKSSFKEAKMMIRPKHFKP" variation 1575 /gene="FGL2" /frequency="0.11" /replace="c" variation 1622 /gene="FGL2" /frequency="0.09" /replace="a" variation 2704 /gene="FGL2" /frequency="0.01" /replace="c" variation 3589 /gene="FGL2" /frequency="0.09" /replace="c" repeat_region 3754..3924 /rpt_family="MIR" /rpt_type=dispersed variation 4137 /gene="FGL2" /frequency="0.15" /replace="t" variation 4589 /gene="FGL2" /frequency="0.01" /replace="t" variation 5092 /frequency="0.02" /replace="t" repeat_region 5302..5601 /rpt_family="Alu" /rpt_type=dispersed variation 5333 /frequency="0.04" /replace="t" variation 5621 /frequency="0.01" /replace="" variation 6077 /frequency="0.94" /replace="" variation 6084 /frequency="0.08" /replace="g" variation 6243 /frequency="0.01" /replace="g" ORIGIN 1 gtgctccaag tttgcatgac tatcattcct gtatgaggga agaaatagct aaattcctcc 61 gctacagcta caggaacaaa ggctcattaa agctgatgat ctgtttacat gatcagaggt 121 agatctaggg ttggaagcca ggtctcctga gtatgcgaga ataaatacag tcatggaagt 181 gtaaagagtc tgccaacatt ttgagaatgt gaataggatt tggctaaaat taaggggata 241 tacagaaaag tcataggaaa tcaggttaaa gacataaata tgagataggc tacagagtgt 301 tttaagtaat acaataaaac atttagattt ttgcccatgt cagtcatttt gaaattattt 361 ttaaagcaaa aaaacccttt ttaaacaaga aatcttatga gatgtcaata tgcaaaacaa 421 attaaaagga ggtggtttct ctaactgaag ctgttcctct ttcctgcctt cagcctctga 481 agagaaagtt agaaaactat tatcattaat gctacatgtt ttgaacaagc tgatatacca 541 agtggcccag agagcaggta gaagaaccag cgtggagaca gaaagcaaga ggcccgcctg 601 ccagggctac ctgcagaaag aaagggcaaa gatgctgtag gcaagagaag ttcaggacag 661 acactggcat agctcaaaga ttcacatttg agcagctgtg gaagatgaca gtacaattac 721 caaaatgtcg aagggcaaag gaggcagcta ctggttttga tgaaagacaa ttatgtcctt 781 ttaaatgggt cttagacatt tagacattta tatacactat gctacggaca aaggaataga 841 aagtagcact tttttctcca ctagttttct tctctttttc aagtagatga agcaaaagtc 901 aactgcaata gtcagaaagc tgtactttgt tacacttaga aacttctaaa agtgcttaag 961 atttcacctg aaagtccaac atgaagaaaa tacaggctcc ccaatgcccc attctaagaa 1021 ggaaaaagga ccattttcat tttagtaacg tttctgttct atagacagtt tggataacta 1081 gctcttactt tttatcttta aaaactgttt ttccagtgaa gttacgtata attatttact 1141 tcaagcgtaa gtataccaaa ttactttaga aatgcaagac ttttcttata cttcataaaa 1201 tacattatga aagtgaatct tgttggctgt gtacatttga ctataataat ttcaatgcat 1261 attatttcta ttgagagtaa gttacagttt ttggcaaact gcgtttgatg agggctatct 1321 cctcttcctg tgcgtttcta aaacttgtga tgcaaacgct cccacccttt cctgggaaca 1381 cagaaagcct gactcaggca gctgccgcta ttaaagcagc tccagccctg cgcactccct 1441 gctggggtga gcagcactgt aaagatgaag ctggctaact ggtactggct gagctcagct 1501 gttcttgcca cttacggttt tttggttgtg gcaaacaatg aaacagagga aattaaagat 1561 gaaagagcaa aggatgtctg cccagtgaga ctagaaagca gagggaaatg cgaagaggca 1621 ggggagtgcc cctaccaggt aagcctgccc cccttgacta ttcagctccc gaagcaattc 1681 agcaggatcg aggaggtgtt caaagaagtc caaaacctca aggaaatcgt aaatagtcta 1741 aagaaatctt gccaagactg caagctgcag gctgatgaca acggagaccc aggcagaaac 1801 ggactgttgt tacccagtac aggagccccg ggagaggttg gtgataacag agttagagaa 1861 ttagagagtg aggttaacaa gctgtcctct gagctaaaga atgccaaaga ggagatcaat 1921 gtacttcatg gtcgcctgga gaagctgaat cttgtaaata tgaacaacat agaaaattat 1981 gttgacagca aagtggcaaa tctaacattt gttgtcaata gtttggatgg caaatgttca 2041 aagtgtccca gccaagaaca aatacagtca cgtccaggta tgtataataa tgttttctta 2101 tcatatgttc ataaatgtta tacagctaga gagtatctat aaacattaac ctgagtcagt 2161 aagttaaata gatgacagat taagtctttt atttatcaag gtgcacagga aaaaataaat 2221 atcttctcaa atatgaccac ataaatatga cctaattaca aaaatcatag ttagttctgt 2281 atccactgga agtcactttc aattttaaga tcttatttgt taatgccaga cctacttgca 2341 agcagaagta gagagaattt cttgatgttt tagtgcattt aacttgtctc ttcaatgagg 2401 tgtttgaaaa caataaagat aaggcgatgt tcacaattgt gccttgtttg ttggaaatca 2461 gtttttcttg tgattgactg actgccgctt ctcatggcta aagaggtctt tgaaagattt 2521 tagcaagtaa tctagttctt aatcccaaat atctggagaa aatgggagag tttacagatg 2581 gaataaaagc agtttcatat gtgtgcacaa atttttgctt tgagacctag tggcacaaaa 2641 aatattttaa ggggagagtt ttagcatgcc actaagggaa ggtattcata tttctttctc 2701 ttttacctga agttagaatt caagcagata gaagtagaac ccatcctcac catccaaatt 2761 acttgaatta actttaataa atacatgtga aattccacag acttaatcgc ctactccacc 2821 cacgaactaa cagtggtatt gactctccaa accttggctt ttcacctgag tcactgggac 2881 cactgttgct gactgtctca tactttggaa agccatctcc gcatttggac ctctacttac 2941 catgaacgtg aggttgaaag gacagggcgg agatcacttt catttagaga cagtatctca 3001 ggcatgctcc atccccaggg catctgccag tgaaggaggg aagggtcata ttttcaagga 3061 cctctattgg taatactcct ggcagcctgc atctgaatgt acctggcaca ctgcgaatcc 3121 aaggttcacc gcttaggtga catcagtggg tatacattag attagatgct gcatggcaac 3181 ttgtcatgat atgaagacta ttgtctattt ttctcctaaa cattttgggt gaaataactg 3241 aatattctga gctctaaata tacaggaata gatttttatg ccttagggta tctcatatta 3301 aacttacctt atttgtcaca cattttaata aaaactatct gggagtaaat atctgtctga 3361 ttcatacaga actttgttaa ctgattatta tgcttatcct caatatagtc acctgttgtt 3421 tctttctaga aacccaacat gtgaaatagt ggctaaatac tttcctagat aataaataca 3481 gaataagaat attggtgtgt cattgaaaaa gatacttctt tttcacttga gcttctttat 3541 atagttgtca agtgaaatga atatgaattt atgatcaatc ctatgcatta ggattttaac 3601 acatcatttg gaatatatgc tataaaacct tctgacagta gaggctatca gcccctttag 3661 gtgaaagaaa atagaagcct gtgcttcctc tgtatgcaag gaatacagtt ctaggagagt 3721 tagaatcatc tgatttttag gaccaaggga tgcaatgatt acgagaacaa agctttgctg 3781 ccagccagat ctgagttagt gtcctggctc tgccacttaa agctcaggtg aaggtgggca 3841 agccactgat ctttatgcct aaatatcctc acatgcagac tggcagtaac gcctacatca 3901 taaggtcaat gttcagattc agtgtgaaaa tgttacccag tctggcagca tgcctagaac 3961 gtataggtag gcctcactac ataatactaa attattaaaa ctgtactttt attattttct 4021 tattgtcgtt tgctgttgat gctgtcatta ttactaccaa ccaagagtat attagaggtc 4081 ctttctgctt tataacatta ggttcttctt gtgaggcctt aagcatttgc taaacaggtt 4141 caagtaagtt tagtaaagtt tcattactgc cattgattca attatcaaac tgcttttgta 4201 catataaaga attcttcaga tgcatggttt ctattaacaa gatccaatgc cttcctttta 4261 tttccccttc agttcaacat ctaatatata aagattgctc tgactactac gcaataggca 4321 aaagaagcag tgagacctac agagttacac ctgatcccaa aaatagtagc tttgaagttt 4381 actgtgacat ggagaccatg gggggaggct ggacagtgct gcaggcacgt ctcgatggga 4441 gcaccaactt caccagaaca tggcaagact acaaagcagg ctttggaaac ctcagaaggg 4501 aattttggct ggggaacgat aaaattcatc ttctgaccaa gagtaaggaa atgattctga 4561 gaatagatct tgaagacttt aatggtgtcg aactatatgc cttgtatgat cagttttatg 4621 tggctaatga gtttctcaaa tatcgtttac acgttggtaa ctataatggc acagctggag 4681 atgcattacg tttcaacaaa cattacaacc acgatctgaa gtttttcacc actccagata 4741 aagacaatga tcgatatcct tctgggaact gtgggctgta ctacagttca ggctggtggt 4801 ttgatgcatg tctttctgca aacttaaatg gcaaatatta tcaccaaaaa tacagaggtg 4861 tccgtaatgg gattttctgg ggtacctggc ctggtgtaag tgaggcacac cctggtggct 4921 acaagtcctc cttcaaagag gctaagatga tgatcagacc caagcacttt aagccataaa 4981 tcactctgtt cattcctcca ggtattcgtt atctaatagg gcaattaatt ccttcagcac 5041 tttagaatat gccttgtttc atatttttca tagctaaaaa atgatgtctg acggctaggt 5101 tcttatgcta cacagcattt gaaataaagc tgaaaaacaa tgcattttaa aggagtcctt 5161 tgttgttatg ctgttatcca atgaacactt gcaagcaatt agcaatattg agaattatac 5221 attagattta caattctttt aatttctatt gaaacttttt ctattgcttg tattacttgc 5281 tgtatttaaa aaataattgt tggctgggtg tggtagctca cgcctgtaat cccagcactt 5341 tggaatgtca aggcaggcag atcacttgag gtcaggagtt tgagaccagc ctggccaaac 5401 atgtgaaacg ctgtctctat taaaaataca aaaattagcc gggcatggtg gtacatgcct 5461 gtaatcctag ctacttggga ggctgaggca ggagaatcgc ttgaacctga gaggaagagg 5521 ttgcagtgag ccaagactga gccactgcac tccagcatgg gtgacagaga aaactctgtc 5581 tcaaacaaaa aaataataaa atttattcag taggctggat tctacacaaa gtaatctgta 5641 tttgggccat gatttaagca catctgaagg tatatcactc ttttcaggct ataattattt 5701 gggtaatctt cattctgaga caaacttaat ctatatcatt tactttgcaa cagaacaacc 5761 ctacagcatt ttggttccca gactaaggga actaatatct atataattaa acttgttcat 5821 ttatcattca tgaaatataa aatacttgtc atttaaaccg tttaaaaatg tggtagcata 5881 atgtcacccc aaaaagcatt cagaaagcaa tgtaactgtg aagaccaggg tttaaaggta 5941 attcatttat agtttataac tccttagatg tttgatgttg aaaactgctt taacatgaaa 6001 attatcttcc tctgctctgt gtgaacaata gcttttaatt taagattgct cactactgta 6061 ctagactact ggtaggtttt ttttgggggg ggtgggtagg gatatgtggg taatgaagca 6121 tttacttaca ggctatcata ctctgaggcc aattttatct ccaaagcaat aatatcatta 6181 agtgattcac ttcatagaag gctaagtttc tctaggacag atagaaaaca tgaattttga 6241 aatatataga acagtagtta aaatactata tatttcaacc ctggctggta gattgcttat 6301 tttactatca gaaactaaaa gatagatttt tacccaaaca gaagtatctg taatttttat 6361 aattcatcaa ttctggaatg ct //