Site      Genotype1 AD-pop    ED-pop    Total-pop Genotype2 AD-pop    ED-pop    Total-pop Genotype3 AD-pop    ED-pop    Total-pop AD-chi2   ED-chi2   Total-chi2
000262    GG        23        23        46        GT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
000286    CC        0         0         0         CT        2         0         2         TT        22        23        45        0.045     0.000     0.022     
000741    AA        0         0         0         AG        3         0         3         GG        21        23        44        0.107     0.000     0.051     
000838    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
000849    AA        0         0         0         AG        0         1         1         GG        24        22        46        0.000     0.011     0.005     
001330    CC        22        22        44        CT        0         1         1         TT        0         0         0         0.000     0.011     0.006     
002900    AA        22        23        45        AG        2         0         2         GG        0         0         0         0.045     0.000     0.022     
003045    AA        0         0         0         AT        1         0         1         TT        23        23        46        0.011     0.000     0.005     
003054    CC        0         0         0         CT        1         0         1         TT        23        23        46        0.011     0.000     0.005     
003486    CC        0         0         0         CT        1         0         1         TT        23        23        46        0.011     0.000     0.005     
003574    --        0         0         0         +-        1         1         2         ++        23        22        45        0.011     0.011     0.022     
003662    CC        0         0         0         CT        1         0         1         TT        23        23        46        0.011     0.000     0.005     
003730    AA        23        23        46        AG        1         0         1         GG        0         0         0         0.011     0.000     0.005     
003981    AA        24        21        45        AT        0         2         2         TT        0         0         0         0.000     0.048     0.022     
004190    AA        0         0         0         AG        1         0         1         GG        21        22        43        0.012     0.000     0.006     
004235    AA        1         0         1         AG        12        7         19        GG        9         15        24        1.455     0.787     1.561     
005414    CC        24        21        45        CT        0         2         2         TT        0         0         0         0.000     0.048     0.022     
005459    --        12        11        23        +-        8         5         13        ++        4         7         11        1.500     6.999     7.833     
005782    CC        20        23        43        CG        3         0         3         GG        0         0         0         0.112     0.000     0.052     
006282    GG        23        23        46        GT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
006419    AA        0         7         7         AC        4         5         9         CC        19        11        30        0.209     6.999     10.522    
006564    AA        0         7         7         AC        4         5         9         CC        19        11        30        0.209     6.999     10.522    
006704    AA        0         0         0         AG        0         2         2         GG        23        21        44        0.000     0.048     0.023     
006926    AA        24        21        45        AG        0         2         2         GG        0         0         0         0.000     0.048     0.022     
007245    AA        23        23        46        AG        1         0         1         GG        0         0         0         0.011     0.000     0.005     
007379    CC        24        22        46        CT        0         1         1         TT        0         0         0         0.000     0.011     0.005     
007935    --        1         0         1         +-        4         0         4         ++        19        23        42        1.361     0.000     3.895     
007992    AA        0         0         0         AG        6         0         6         GG        18        23        41        0.490     0.000     0.218     
008264    CC        0         0         0         CT        1         2         3         TT        22        20        42        0.011     0.050     0.054     
008349    CC        11        10        21        CT        7         5         12        TT        6         7         13        3.654     6.340     9.818     
008455    GG        1         0         1         GT        3         0         3         TT        19        23        42        2.457     0.000     6.146     
008720    AA        1         0         1         AG        6         0         6         GG        16        23        39        0.195     0.000     1.467     
009279    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     

Note:

AD: African_Descent
ED: European_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

003574: c
005459: ggccaaata
007935: GTTT