Site    CDNA-Pos  Description   Allele1  AD-freq  ED-freq  Total-freq  Allele2  AD-freq  ED-freq  Total-freq  Protein-Pos  Codon1  Codon2  Amino1  Amino2
000262  00000     ------------  G        0.98     1.00     0.99        T        0.02     0.00     0.01        0000         ---     ---     ---     ---     
000286  00000     ------------  T        0.96     1.00     0.98        C        0.04     0.00     0.02        0000         ---     ---     ---     ---     
000741  00000     ------------  G        0.94     1.00     0.97        A        0.06     0.00     0.03        0000         ---     ---     ---     ---     
000838  00000     ------------  G        0.98     1.00     0.99        A        0.02     0.00     0.01        0000         ---     ---     ---     ---     
000849  00000     ------------  G        1.00     0.98     0.99        A        0.00     0.02     0.01        0000         ---     ---     ---     ---     
001330  00000     ------------  C        1.00     0.98     0.99        T        0.00     0.02     0.01        0000         ---     ---     ---     ---     
002900  00000     ------------  A        0.96     1.00     0.98        G        0.04     0.00     0.02        0000         ---     ---     ---     ---     
003045  00000     ------------  T        0.98     1.00     0.99        A        0.02     0.00     0.01        0000         ---     ---     ---     ---     
003054  00000     ------------  T        0.98     1.00     0.99        C        0.02     0.00     0.01        0000         ---     ---     ---     ---     
003486  00000     ------------  T        0.98     1.00     0.99        C        0.02     0.00     0.01        0000         ---     ---     ---     ---     
003574  00353     FRAME SHIFT   -        0.02     0.02     0.02        +        0.98     0.98     0.98        0116         G-C     GCC     ---     ---     
003662  00000     ------------  T        0.98     1.00     0.99        C        0.02     0.00     0.01        0000         ---     ---     ---     ---     
003730  00000     ------------  A        0.98     1.00     0.99        G        0.02     0.00     0.01        0000         ---     ---     ---     ---     
003981  00000     ------------  A        1.00     0.96     0.98        T        0.00     0.04     0.02        0000         ---     ---     ---     ---     
004190  00000     ------------  G        0.98     1.00     0.99        A        0.02     0.00     0.01        0000         ---     ---     ---     ---     
004235  00000     ------------  G        0.68     0.84     0.76        A        0.32     0.16     0.24        0000         ---     ---     ---     ---     
005414  00000     ------------  C        1.00     0.96     0.98        T        0.00     0.04     0.02        0000         ---     ---     ---     ---     
005459  00000     ------------  -        0.67     0.59     0.63        +        0.33     0.41     0.37        0000         ---     ---     ---     ---     
005782  00000     ------------  C        0.93     1.00     0.97        G        0.07     0.00     0.03        0000         ---     ---     ---     ---     
006282  00000     ------------  G        0.98     1.00     0.99        T        0.02     0.00     0.01        0000         ---     ---     ---     ---     
006419  00000     ------------  C        0.91     0.59     0.75        A        0.09     0.41     0.25        0000         ---     ---     ---     ---     
006564  00000     ------------  C        0.91     0.59     0.75        A        0.09     0.41     0.25        0000         ---     ---     ---     ---     
006704  00000     ------------  G        1.00     0.96     0.98        A        0.00     0.04     0.02        0000         ---     ---     ---     ---     
006926  00000     ------------  A        1.00     0.96     0.98        G        0.00     0.04     0.02        0000         ---     ---     ---     ---     
007245  00000     ------------  A        0.98     1.00     0.99        G        0.02     0.00     0.01        0000         ---     ---     ---     ---     
007379  00756     SYNON         C        1.00     0.98     0.99        T        0.00     0.02     0.01        0250         CAC     CAT     HIS(H)  HIS(H)  
007935  00000     ------------  -        0.12     0.00     0.06        +        0.88     1.00     0.94        0000         ---     ---     ---     ---     
007992  00000     ------------  G        0.88     1.00     0.94        A        0.12     0.00     0.06        0000         ---     ---     ---     ---     
008264  00000     ------------  T        0.98     0.95     0.97        C        0.02     0.05     0.03        0000         ---     ---     ---     ---     
008349  00000     ------------  C        0.60     0.57     0.59        T        0.40     0.43     0.41        0000         ---     ---     ---     ---     
008455  00000     ------------  T        0.89     1.00     0.95        G        0.11     0.00     0.05        0000         ---     ---     ---     ---     
008720  00000     ------------  G        0.83     1.00     0.91        A        0.17     0.00     0.09        0000         ---     ---     ---     ---     
009279  00000     ------------  C        0.98     1.00     0.99        T        0.02     0.00     0.01        0000         ---     ---     ---     ---     

NOTE:
AD-freq: African Descent frequency
ED-freq: European Descent frequency

NOTE:
Diallelic insertion/deletion polymorphisms are represented as:
+ : allele insertion
- : allele deletion

The + (inserted) allele for each site is listed below:
003574: C
005459: GGCCAAATA
007935: GTTT