Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000323 00000 ------------ T 0.48 0.52 0.50 C 0.52 0.48 0.50 0000 --- --- --- --- 000393 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 000716 00000 ------------ A 0.50 0.52 0.51 G 0.50 0.48 0.49 0000 --- --- --- --- 000811 00000 ------------ T 0.55 0.50 0.53 C 0.45 0.50 0.47 0000 --- --- --- --- 000948 00000 ------------ T 0.76 0.95 0.85 G 0.24 0.05 0.15 0000 --- --- --- --- 002044 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002113* 002306 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002826 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003285 00000 ------------ T 0.54 0.48 0.51 C 0.46 0.52 0.49 0000 --- --- --- --- 003387 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003464 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003544 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003555 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003596 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003748 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003828 00000 ------------ G 0.78 1.00 0.88 A 0.22 0.00 0.12 0000 --- --- --- --- 003879 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004135 00000 ------------ T 0.50 0.67 0.58 C 0.50 0.33 0.42 0000 --- --- --- --- 005238 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005256* 005265 00000 ------------ T 0.58 0.46 0.52 C 0.42 0.54 0.48 0000 --- --- --- --- 005333 00000 ------------ C 0.54 0.48 0.51 T 0.46 0.52 0.49 0000 --- --- --- --- 005365 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005415 00000 ------------ A 0.60 0.45 0.53 T 0.40 0.55 0.47 0000 --- --- --- --- 006139 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 006142 00000 ------------ G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 006321 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006347 00000 ------------ G 0.47 0.57 0.52 A 0.53 0.43 0.48 0000 --- --- --- --- 006531 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 006667 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 008108 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 008129 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008344 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008478 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008609 00000 ------------ C 0.92 0.70 0.81 G 0.08 0.30 0.19 0000 --- --- --- --- 008681 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008731 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008821 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009003 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 009007 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 009088 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 009364 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 009475 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 009551 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 009578 00000 ------------ A 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 009780 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 009814 00000 ------------ - 0.80 1.00 0.90 + 0.20 0.00 0.10 0000 --- --- --- --- 009883 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010309 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 010377 00000 ------------ T 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 010525 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 010609 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010948 00000 ------------ C 0.77 0.81 0.79 T 0.23 0.19 0.21 0000 --- --- --- --- 011340 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011452 00000 ------------ G 0.70 1.00 0.85 A 0.30 0.00 0.15 0000 --- --- --- --- 011472 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011854 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011902 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012049 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012377 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012651 00000 ------------ A 0.92 0.61 0.77 G 0.08 0.39 0.23 0000 --- --- --- --- 012806 00000 ------------ T 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 014809 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015185 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015452 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015502 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015584 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 015610 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 015751 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016095 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 016171 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 016780 00000 ------------ - 0.44 0.68 0.55 + 0.56 0.32 0.45 0000 --- --- --- --- 016846 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016951 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 017007 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 017170 00000 ------------ G 0.44 0.72 0.57 A 0.56 0.28 0.43 0000 --- --- --- --- 017264 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017371 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 017796 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 017802 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 017851 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 018131 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 019910 00000 ------------ A 1.00 0.83 0.91 G 0.00 0.17 0.09 0000 --- --- --- --- 020465 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 021511 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021554 00000 ------------ A 0.45 0.71 0.56 C 0.55 0.29 0.44 0000 --- --- --- --- 021975 -----** NON-SYN A 0.90 0.65 0.77 G 0.10 0.35 0.23 0194 ACT GCT THR(T) ALA(A) 022592 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022594 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 022880 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 023398 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 023749 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 024633 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 024664 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 024769 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024925 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025460 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026211 00000 ------------ C 0.65 0.78 0.72 G 0.35 0.22 0.28 0000 --- --- --- --- 026273 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 026750 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 026793 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 026892 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 027151 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 027214 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027226 00000 ------------ T 0.72 0.76 0.74 C 0.28 0.24 0.26 0000 --- --- --- --- 027306 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027501 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 027517 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027842 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028158 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 028410 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028427 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028585 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028671 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 029064 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029144 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029287 00000 ------------ G 0.88 0.78 0.83 C 0.12 0.22 0.17 0000 --- --- --- --- 029317 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029436 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029548 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029552 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 029555 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029617 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029766 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 029816 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 030191 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 030197 00000 ------------ T 0.68 0.78 0.73 C 0.33 0.22 0.27 0000 --- --- --- --- 030564 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030634 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 030662 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030893 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 031089 00000 ------------ T 0.75 0.82 0.78 C 0.25 0.18 0.22 0000 --- --- --- --- 031168 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 031206 00000 ------------ A 0.75 0.82 0.78 G 0.25 0.18 0.22 0000 --- --- --- --- 031922 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032113 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032922 -----** NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0461 ACT CCT THR(T) PRO(P) 033403 -----** 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033614 -----** 3' UTR G 0.67 0.82 0.74 A 0.33 0.18 0.26 0000 --- --- --- --- 034508 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034569 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 035124 00000 ------------ C 0.80 0.91 0.86 G 0.20 0.09 0.14 0000 --- --- --- --- 035243 00000 ------------ C 0.80 0.91 0.86 G 0.20 0.09 0.14 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006139: A 006531: CA 009814: CAAA 010525: A 015185: TAGT 016780: T 018131: AAT 022880: A 029436: A 031168: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002113 A 0.04 0.00 0.02 G 0.96 0.98 0.97 T 0.00 0.02 0.01 005256 A 0.42 0.50 0.46 C 0.58 0.46 0.52 G 0.00 0.04 0.02