Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000251 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000366 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000369 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000825 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 000881 00000 ------------ T 0.87 0.96 0.91 C 0.13 0.04 0.09 0000 --- --- --- --- 001065 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001067 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001113 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001119 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001191 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 001330 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001387 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 001587 00000 ------------ G 0.48 0.91 0.69 A 0.52 0.09 0.31 0000 --- --- --- --- 001592 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 001818 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 001846 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002055 00140 NON-SYN G 0.95 1.00 0.98 A 0.05 0.00 0.02 0015 GGC AGC GLY(G) SER(S) 002407 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 002845 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003578 00000 ------------ C 0.75 0.54 0.65 G 0.25 0.46 0.35 0000 --- --- --- --- 003776 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003830 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004070 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004073 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004096 00000 ------------ G 0.94 0.96 0.95 C 0.06 0.04 0.05 0000 --- --- --- --- 004247 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004436 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 004526 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 004619 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004853 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 004974 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005353 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 005391 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006102 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 006197 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006543 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006560 00000 ------------ - 0.07 0.41 0.24 + 0.93 0.59 0.76 0000 --- --- --- --- 006674 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 007046 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007047 00000 ------------ C 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 007180 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007211 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 007302 00000 ------------ G 0.85 0.96 0.90 C 0.15 0.04 0.10 0000 --- --- --- --- 011055 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011306 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011307 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011381 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 011414 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011792 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011799 00000 ------------ C 0.92 0.59 0.76 T 0.08 0.41 0.24 0000 --- --- --- --- 011812 00000 ------------ C 0.92 0.59 0.76 T 0.08 0.41 0.24 0000 --- --- --- --- 014611 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 014612 00000 ------------ G 0.90 0.59 0.74 A 0.10 0.41 0.26 0000 --- --- --- --- 014685 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 014742 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014835 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014917 00000 ------------ C 0.91 0.57 0.74 A 0.09 0.43 0.26 0000 --- --- --- --- 014934 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 015028 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015419 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015444 00000 ------------ - 0.17 0.43 0.29 + 0.83 0.57 0.71 0000 --- --- --- --- 015499 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 015672 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 015708 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015784 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015794 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015831 00000 ------------ G 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 016121 00416 NON-SYN G 0.67 0.98 0.83 C 0.33 0.02 0.17 0107 GAT CAT ASP(D) HIS(H) 016469 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016534 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 016541 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016639 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016700 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016738 00000 ------------ T 0.85 0.57 0.71 G 0.15 0.43 0.29 0000 --- --- --- --- 016906 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017042 00000 ------------ A 0.75 0.59 0.66 G 0.25 0.41 0.34 0000 --- --- --- --- 017212 00000 ------------ T 0.91 0.59 0.74 C 0.09 0.41 0.26 0000 --- --- --- --- 017300 00000 ------------ G 0.91 0.59 0.74 T 0.09 0.41 0.26 0000 --- --- --- --- 017339 00000 ------------ - 0.18 0.41 0.31 + 0.82 0.59 0.69 0000 --- --- --- --- 017357 00000 ------------ - 0.85 0.59 0.72 + 0.15 0.41 0.28 0000 --- --- --- --- 017557 00000 ------------ G 0.94 0.70 0.82 A 0.06 0.30 0.18 0000 --- --- --- --- 017586 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 017683 00000 ------------ - 0.92 0.59 0.76 + 0.08 0.41 0.24 0000 --- --- --- --- 017714 00000 ------------ G 0.85 0.59 0.72 A 0.15 0.41 0.28 0000 --- --- --- --- 017926 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017980 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017991 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018289 00000 ------------ A 0.69 0.98 0.83 C 0.31 0.02 0.17 0000 --- --- --- --- 018354 00000 ------------ C 0.86 0.59 0.72 T 0.14 0.41 0.28 0000 --- --- --- --- 018504 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 018795 00000 ------------ G 0.85 0.65 0.75 A 0.15 0.35 0.25 0000 --- --- --- --- 019034 00000 ------------ A 0.43 0.89 0.66 C 0.57 0.11 0.34 0000 --- --- --- --- 019041 00000 ------------ G 0.85 0.61 0.73 C 0.15 0.39 0.27 0000 --- --- --- --- 019093 00000 ------------ G 0.52 0.89 0.71 A 0.48 0.11 0.29 0000 --- --- --- --- 019171 00000 ------------ C 0.57 0.98 0.77 T 0.43 0.02 0.23 0000 --- --- --- --- 019211 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019292 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 019389 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 019390 00000 ------------ G 0.89 0.57 0.72 A 0.11 0.43 0.28 0000 --- --- --- --- 019463 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 019868 00000 ------------ - 0.10 0.39 0.25 + 0.90 0.61 0.75 0000 --- --- --- --- 019923 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 019959 00000 ------------ C 0.75 0.55 0.65 T 0.25 0.45 0.35 0000 --- --- --- --- 020057 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 020294 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 020335 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 020601 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020627 00000 ------------ G 0.95 0.61 0.78 T 0.05 0.39 0.22 0000 --- --- --- --- 020736 00000 ------------ C 0.93 0.59 0.76 T 0.07 0.41 0.24 0000 --- --- --- --- 020987 00000 ------------ T 0.70 0.47 0.60 C 0.30 0.53 0.40 0000 --- --- --- --- 021097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021135 00000 ------------ C 0.98 0.64 0.81 A 0.02 0.36 0.19 0000 --- --- --- --- 021152* 021198 00000 ------------ G 0.97 0.65 0.81 A 0.03 0.35 0.19 0000 --- --- --- --- 026871 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 027051 00000 ------------ A 0.33 0.93 0.62 G 0.67 0.07 0.38 0000 --- --- --- --- 027061 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027106 00000 ------------ G 0.42 0.93 0.66 T 0.58 0.07 0.34 0000 --- --- --- --- 027107 00000 ------------ - 0.38 0.53 0.44 + 0.62 0.47 0.56 0000 --- --- --- --- 027277 00000 ------------ C 0.94 0.59 0.77 G 0.06 0.41 0.23 0000 --- --- --- --- 027330 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 027462 00000 ------------ G 0.42 0.91 0.66 C 0.58 0.09 0.34 0000 --- --- --- --- 027545 00000 ------------ A 0.50 0.92 0.68 G 0.50 0.08 0.32 0000 --- --- --- --- 027561 00000 ------------ C 0.69 0.97 0.81 A 0.31 0.03 0.19 0000 --- --- --- --- 027568 00000 ------------ T 0.42 0.93 0.65 G 0.58 0.07 0.35 0000 --- --- --- --- 027602 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 027665 00502 SYNON G 0.52 0.91 0.71 A 0.48 0.09 0.29 0135 GCG GCA ALA(A) ALA(A) 027812 00649 SYNON G 0.42 0.91 0.66 T 0.58 0.09 0.34 0184 TCG TCT SER(S) SER(S) 027824 00661 SYNON G 0.94 1.00 0.97 C 0.06 0.00 0.03 0188 GGG GGC GLY(G) GLY(G) 027883 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028166 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028183 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028441 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028495 00000 ------------ T 0.41 0.91 0.67 C 0.59 0.09 0.33 0000 --- --- --- --- 028499 00000 ------------ - 0.59 0.09 0.33 + 0.41 0.91 0.67 0000 --- --- --- --- 028500 00000 ------------ G 0.50 0.50 0.50 A 0.50 0.50 0.50 0000 --- --- --- --- 028506 00000 ------------ G 0.43 0.91 0.68 A 0.57 0.09 0.32 0000 --- --- --- --- 028607 00000 ------------ T 0.41 0.91 0.66 G 0.59 0.09 0.34 0000 --- --- --- --- 028808 00000 ------------ A 0.73 0.54 0.63 G 0.27 0.46 0.37 0000 --- --- --- --- 028916 00000 ------------ G 0.41 0.91 0.67 A 0.59 0.09 0.33 0000 --- --- --- --- 029030 00000 ------------ T 0.98 0.90 0.94 A 0.02 0.10 0.06 0000 --- --- --- --- 029057 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029058 00000 ------------ G 0.43 0.91 0.68 A 0.57 0.09 0.32 0000 --- --- --- --- 029254 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 029381 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029460 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 029467 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029468 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 029565 00000 ------------ G 0.35 0.91 0.63 C 0.65 0.09 0.37 0000 --- --- --- --- 029652 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029658 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029695 00000 ------------ A 0.72 0.50 0.61 G 0.28 0.50 0.39 0000 --- --- --- --- 029784 00000 ------------ A 0.37 0.91 0.64 G 0.63 0.09 0.36 0000 --- --- --- --- 030011 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030074 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 030170 00000 ------------ - 0.50 0.09 0.30 + 0.50 0.91 0.70 0000 --- --- --- --- 030414 00000 ------------ C 0.71 0.50 0.61 T 0.29 0.50 0.39 0000 --- --- --- --- 030539 00000 ------------ A 0.98 0.87 0.93 G 0.02 0.13 0.07 0000 --- --- --- --- 030690 00000 ------------ C 0.71 0.50 0.61 G 0.29 0.50 0.39 0000 --- --- --- --- 030994 00000 ------------ C 0.71 0.50 0.61 T 0.29 0.50 0.39 0000 --- --- --- --- 031039 00000 ------------ G 0.71 0.50 0.61 C 0.29 0.50 0.39 0000 --- --- --- --- 031215 00000 ------------ A 0.72 0.52 0.62 C 0.28 0.48 0.38 0000 --- --- --- --- 031273 00000 ------------ C 0.74 0.52 0.63 T 0.26 0.48 0.37 0000 --- --- --- --- 031280 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031340 00000 ------------ A 0.74 0.52 0.63 G 0.26 0.48 0.37 0000 --- --- --- --- 031375 00000 ------------ - 0.45 0.48 0.47 + 0.55 0.52 0.53 0000 --- --- --- --- 031621 00913 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0272 AAC AAT ASN(N) ASN(N) 031833 00000 ------------ C 0.79 0.59 0.69 T 0.21 0.41 0.31 0000 --- --- --- --- 032329 00000 ------------ G 0.59 0.95 0.80 A 0.41 0.05 0.20 0000 --- --- --- --- 032392 00000 ------------ T 0.97 0.98 0.97 C 0.03 0.02 0.03 0000 --- --- --- --- 032470 00000 ------------ C 0.97 0.98 0.97 A 0.03 0.02 0.03 0000 --- --- --- --- 032494 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 035788 01335 NON-SYN T 0.97 0.91 0.94 C 0.03 0.09 0.06 0413 ATG ACG MET(M) THR(T) 035792 01339 SYNON A 0.89 0.89 0.89 G 0.11 0.11 0.11 0414 AAA AAG LYS(K) LYS(K) 035908 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 036088 00000 ------------ T 0.97 0.98 0.98 C 0.03 0.02 0.02 0000 --- --- --- --- 036090 00000 ------------ G 0.82 0.55 0.68 C 0.17 0.45 0.32 0000 --- --- --- --- 036324 00000 ------------ T 0.97 0.93 0.95 G 0.03 0.07 0.05 0000 --- --- --- --- 036375 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036404 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 036647 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 036648 00000 ------------ T 0.75 0.70 0.72 A 0.25 0.30 0.28 0000 --- --- --- --- 036953 00000 ------------ C 0.77 0.54 0.66 T 0.23 0.46 0.34 0000 --- --- --- --- 037049 00000 ------------ C 0.74 0.78 0.76 T 0.26 0.22 0.24 0000 --- --- --- --- 037092 00000 ------------ C 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 037181 00000 ------------ C 0.91 0.87 0.89 A 0.09 0.13 0.11 0000 --- --- --- --- 037182 00000 ------------ C 0.74 0.78 0.76 G 0.26 0.22 0.24 0000 --- --- --- --- 038092 00000 ------------ C 0.87 0.78 0.83 T 0.13 0.22 0.17 0000 --- --- --- --- 038104 00000 ------------ G 0.74 0.46 0.60 C 0.26 0.54 0.40 0000 --- --- --- --- 038133 00000 ------------ A 0.84 0.83 0.84 G 0.16 0.17 0.16 0000 --- --- --- --- 038224 00000 ------------ C 0.54 0.52 0.53 T 0.46 0.48 0.47 0000 --- --- --- --- 038337 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 038529 01635 NON-SYN G 0.65 1.00 0.83 A 0.35 0.00 0.17 0513 AGA AAA ARG(R) LYS(K) 038592 01698 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0534 CGA CAA ARG(R) GLN(Q) 041915 01813 SYNON G 0.98 0.91 0.94 A 0.02 0.09 0.06 0572 GAG GAA GLU(E) GLU(E) 042105 00000 ------------ G 0.84 0.78 0.81 A 0.16 0.22 0.19 0000 --- --- --- --- 042112 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042195 00000 ------------ - 0.80 0.76 0.78 + 0.20 0.24 0.22 0000 --- --- --- --- 042262 00000 ------------ A 0.52 0.70 0.61 G 0.48 0.30 0.39 0000 --- --- --- --- 042336 00000 ------------ T 0.80 0.78 0.79 C 0.20 0.22 0.21 0000 --- --- --- --- 042347 00000 ------------ G 0.80 0.78 0.79 C 0.20 0.22 0.21 0000 --- --- --- --- 042439 00000 ------------ A 0.80 0.78 0.79 G 0.20 0.22 0.21 0000 --- --- --- --- 042460 00000 ------------ T 0.80 0.78 0.79 G 0.20 0.22 0.21 0000 --- --- --- --- 042713 00000 ------------ T 0.80 0.47 0.65 C 0.20 0.53 0.35 0000 --- --- --- --- 042853 00000 ------------ C 0.96 0.94 0.95 T 0.04 0.06 0.05 0000 --- --- --- --- 042864 00000 ------------ C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 043095 00000 ------------ C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 043135 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 043219 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 043288 00000 ------------ C 0.77 0.78 0.78 G 0.23 0.22 0.22 0000 --- --- --- --- 043306 00000 ------------ T 0.75 0.66 0.71 C 0.25 0.34 0.29 0000 --- --- --- --- 043620 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 043637 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 043703 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 044054 02017 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0640 ACC ACT THR(T) THR(T) 044060 02023 SYNON C 0.97 0.91 0.94 A 0.03 0.09 0.06 0642 ACC ACA THR(T) THR(T) 044207 00000 ------------ G 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 044663 00000 ------------ C 0.74 0.70 0.72 T 0.26 0.30 0.28 0000 --- --- --- --- 044730 00000 ------------ G 0.76 0.76 0.76 A 0.24 0.24 0.24 0000 --- --- --- --- 044804 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 044961 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 044992 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 045000 00000 ------------ T 0.59 1.00 0.77 G 0.41 0.00 0.23 0000 --- --- --- --- 045041 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045049 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 045081 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 045119 00000 ------------ G 0.73 1.00 0.85 A 0.27 0.00 0.15 0000 --- --- --- --- 045146 00000 ------------ G 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 045523 02305 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0736 ATC ATT ILE(I) ILE(I) 045550 02332 SYNON T 0.95 1.00 0.98 C 0.05 0.00 0.02 0745 AAT AAC ASN(N) ASN(N) 045616 02398 SYNON A 0.93 1.00 0.97 G 0.07 0.00 0.03 0767 TCA TCG SER(S) SER(S) 045740 02522 NON-SYN C 0.81 1.00 0.91 T 0.19 0.00 0.09 0809 CCA TCA PRO(P) SER(S) 045765 02547 NON-SYN A 0.98 0.93 0.96 C 0.02 0.07 0.04 0817 AAC ACC ASN(N) THR(T) 045888 02670 NON-SYN A 0.73 0.79 0.76 G 0.27 0.21 0.24 0858 AAA AGA LYS(K) ARG(R) 045909 02691 NON-SYN A 0.73 0.79 0.76 G 0.27 0.21 0.24 0865 CAT CGT HIS(H) ARG(R) 046058 02840 NON-SYN A 1.00 0.93 0.97 T 0.00 0.07 0.03 0915 ACT TCT THR(T) SER(S) 046088 02870 NON-SYN A 0.73 0.77 0.75 G 0.27 0.23 0.25 0925 AAG GAG LYS(K) GLU(E) 046221 03003 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0969 AAC AGC ASN(N) SER(S) 046254 03036 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0980 CGT CTT ARG(R) LEU(L) 046753 03535 NON-SYN C 0.94 1.00 0.97 G 0.06 0.00 0.03 1146 CAC CAG HIS(H) GLN(Q) 047168 03950 NON-SYN C 0.87 0.83 0.85 A 0.13 0.17 0.15 1285 CTT ATT LEU(L) ILE(I) 047410 04192 SYNON C 0.88 0.59 0.74 T 0.12 0.41 0.26 1365 ACC ACT THR(T) THR(T) 047525 04307 NON-SYN C 0.92 0.98 0.95 T 0.08 0.02 0.05 1404 CCA TCA PRO(P) SER(S) 047904 04686 NON-SYN A 1.00 0.98 0.99 C 0.00 0.02 0.01 1530 GAG GCG GLU(E) ALA(A) 048160 00000 ------------ A 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 048178 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 048904 00000 ------------ T 0.72 0.78 0.75 A 0.28 0.22 0.25 0000 --- --- --- --- 048932 00000 ------------ - 0.11 0.43 0.27 + 0.89 0.57 0.73 0000 --- --- --- --- 049067 00000 ------------ T 0.56 0.70 0.63 G 0.44 0.30 0.37 0000 --- --- --- --- 050927 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 051402 00000 ------------ T 0.69 0.70 0.70 C 0.31 0.30 0.30 0000 --- --- --- --- 052348 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 052485 00000 ------------ A 0.54 0.66 0.60 G 0.46 0.34 0.40 0000 --- --- --- --- 052814 00000 ------------ G 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 052903 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 053321 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 053322 00000 ------------ C 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 053508 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 057160 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 057162 00000 ------------ C 0.97 0.91 0.94 T 0.03 0.09 0.06 0000 --- --- --- --- 057295 00000 ------------ C 0.76 0.76 0.76 T 0.24 0.24 0.24 0000 --- --- --- --- 057433 05119 SYNON A 0.88 0.98 0.93 G 0.12 0.02 0.07 1674 GGA GGG GLY(G) GLY(G) 057692 00000 ------------ G 0.75 0.76 0.76 A 0.25 0.24 0.24 0000 --- --- --- --- 057948 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 057984 00000 ------------ A 0.54 0.70 0.62 T 0.46 0.30 0.38 0000 --- --- --- --- 058262 00000 ------------ T 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 058453 00000 ------------ T 0.54 0.74 0.63 C 0.46 0.26 0.37 0000 --- --- --- --- 058808 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 058809 00000 ------------ G 0.91 0.98 0.95 A 0.09 0.02 0.05 0000 --- --- --- --- 058979 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 059210 00000 ------------ C 0.91 0.97 0.94 T 0.09 0.03 0.06 0000 --- --- --- --- 059283 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 059462 00000 ------------ G 0.80 0.83 0.81 A 0.20 0.17 0.19 0000 --- --- --- --- 059717 00000 ------------ A 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 059762 00000 ------------ G 0.88 0.76 0.82 A 0.12 0.24 0.18 0000 --- --- --- --- 059794 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 059823 00000 ------------ C 0.76 0.79 0.78 T 0.24 0.21 0.22 0000 --- --- --- --- 059912 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 060029 00000 ------------ G 0.97 0.93 0.95 A 0.03 0.07 0.05 0000 --- --- --- --- 061303 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 061346 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 061390 00000 ------------ G 0.80 0.45 0.63 A 0.20 0.55 0.37 0000 --- --- --- --- 061432 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 061458 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 061859 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 062074 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 062210 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 062642 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 062647 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 062835 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 063047 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 063142 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 063143 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 063240 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 063259 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 063447 00000 ------------ G 0.54 0.73 0.63 A 0.46 0.27 0.37 0000 --- --- --- --- 063748 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 063917 00000 ------------ C 0.83 0.37 0.60 G 0.17 0.63 0.40 0000 --- --- --- --- 063930 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 064034 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 064967 00000 ------------ G 0.75 0.76 0.76 A 0.25 0.24 0.24 0000 --- --- --- --- 065028 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 065388 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 065520 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 065543 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 065669 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 065844 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 066464 00000 ------------ G 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 066473 00000 ------------ - 0.19 0.07 0.13 + 0.81 0.93 0.87 0000 --- --- --- --- 066494 00000 ------------ C 0.80 0.77 0.79 T 0.20 0.23 0.21 0000 --- --- --- --- 066614 00000 ------------ - 0.74 0.76 0.75 + 0.26 0.24 0.25 0000 --- --- --- --- 066872 00000 ------------ C 0.60 0.78 0.69 T 0.40 0.22 0.31 0000 --- --- --- --- 067043 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 067052 00000 ------------ T 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 067243 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 067252 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 067262 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 067698 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 068059 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 068132 00000 ------------ T 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 068155 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 068167 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 068286 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 068441 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 068621 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 068717 00000 ------------ G 0.67 0.45 0.57 A 0.33 0.55 0.43 0000 --- --- --- --- 068859 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 068980 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 069823 00000 ------------ C 0.98 0.95 0.96 A 0.02 0.05 0.04 0000 --- --- --- --- 070698 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 070877 00000 ------------ A 0.74 0.75 0.74 C 0.26 0.25 0.26 0000 --- --- --- --- 071003 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 071143 00000 ------------ C 0.74 0.77 0.76 G 0.26 0.23 0.24 0000 --- --- --- --- 071503 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 071516 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 071785 00000 ------------ A 0.67 0.45 0.57 T 0.33 0.55 0.43 0000 --- --- --- --- 072018 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 072160 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 072244 00000 ------------ C 0.67 0.43 0.55 A 0.33 0.57 0.45 0000 --- --- --- --- 072744 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 072877 06540 NON-SYN T 1.00 0.95 0.98 C 0.00 0.05 0.02 2148 ATG ACG MET(M) THR(T) 073092 00000 ------------ A 0.71 0.72 0.71 C 0.29 0.28 0.29 0000 --- --- --- --- 073193 00000 ------------ - 0.02 0.04 0.03 + 0.98 0.96 0.97 0000 --- --- --- --- 073272 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073399 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 073800 00000 ------------ G 0.71 0.75 0.73 A 0.29 0.25 0.27 0000 --- --- --- --- 074966 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 074984 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 075208 00000 ------------ C 0.75 0.43 0.59 T 0.25 0.57 0.41 0000 --- --- --- --- 075211 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 075339 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 075383 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 075529 00000 ------------ T 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 075694 00000 ------------ C 0.74 0.79 0.76 T 0.26 0.21 0.24 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006560: GTTT 007211: T 011055: T 015444: G 017339: TTTA 017357: TCC 017683: A 019868: A 027107: G 028499: CA 029381: CT 030170: T 031280: CA 031375: T 036404: ATT 042195: AT 044961: C 048932: AAC 057160: A 063047: T 065388: AAAG 066473: A 066614: A 073193: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 021152 C 0.82 0.67 0.74 G 0.10 0.33 0.22 T 0.07 0.00 0.04