Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000599 CC 5 5 10 CT 8 12 20 TT 11 6 17 2.003 0.048 0.790 000969 CC 0 0 0 CG 0 1 1 GG 24 22 46 0.000 0.011 0.005 001089 CC 14 7 21 CT 8 10 18 TT 2 6 8 0.296 0.381 1.368 001269 CC 0 0 0 CG 0 1 1 GG 23 22 45 0.000 0.011 0.006 001826 AA 4 5 9 AG 9 12 21 GG 11 6 17 0.780 0.048 0.299 003494 AA 0 0 0 AT 1 0 1 TT 22 21 43 0.011 0.000 0.006 003586 AA 17 21 38 AG 4 0 4 GG 0 0 0 0.233 0.000 0.105 003825 AA 20 22 42 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 004302 AA 0 0 0 AC 3 0 3 CC 21 21 42 0.107 0.000 0.054 004354 AA 0 0 0 AG 3 0 3 GG 21 21 42 0.107 0.000 0.054 004524 CC 15 8 23 CT 8 10 18 TT 1 3 4 0.003 0.002 0.031 004590 CC 22 22 44 CG 2 0 2 GG 0 0 0 0.045 0.000 0.023 004639 AA 21 22 43 AG 3 0 3 GG 0 0 0 0.107 0.000 0.052 004806 AA 22 21 43 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 005106 CC 0 0 0 CT 4 0 4 TT 18 23 41 0.220 0.000 0.097 005153 -- 0 0 0 +- 1 0 1 ++ 21 23 44 0.012 0.000 0.006 005258 AA 21 23 44 AC 1 0 1 CC 0 0 0 0.012 0.000 0.006 005334 AA 17 14 31 AG 4 8 12 GG 1 1 2 1.144 0.011 0.347 005500 GG 23 23 46 GT 1 0 1 TT 0 0 0 0.011 0.000 0.005 005660 GG 2 5 7 GT 9 12 21 TT 12 5 17 0.028 0.182 0.015 005730 CC 11 5 16 CT 8 12 20 TT 4 5 9 1.252 0.182 0.357 006321 AA 23 23 46 AT 1 0 1 TT 0 0 0 0.011 0.000 0.005 006632 CC 0 0 0 CT 4 0 4 TT 20 23 43 0.198 0.000 0.093 006933 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 007171 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 007533 CC 5 5 10 CT 13 12 25 TT 6 6 12 0.174 0.048 0.203 007713 CC 23 19 42 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 007754 AA 2 5 7 AG 10 10 20 GG 12 6 18 0.002 0.043 0.134 007877 AA 24 19 43 AG 0 2 2 GG 0 1 1 0.000 4.455 10.478 008144 GG 19 22 41 GT 3 0 3 TT 1 0 1 2.457 0.000 5.985 008292 CC 19 23 42 CT 5 0 5 TT 0 0 0 0.324 0.000 0.148 008366 CC 16 23 39 CT 8 0 8 TT 0 0 0 0.960 0.000 0.407 008975 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 009421 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 009527 CC 0 0 0 CG 1 1 2 GG 23 21 44 0.011 0.012 0.023 009590 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 009630 AA 0 0 0 AG 4 0 4 GG 20 23 43 0.198 0.000 0.093 009827 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 009893 AA 0 0 0 AC 3 0 3 CC 21 23 44 0.107 0.000 0.051 009929 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 010085 CC 14 14 28 CT 8 8 16 TT 1 1 2 0.011 0.011 0.023 010224 AA 15 4 19 AG 7 11 18 GG 1 8 9 0.025 0.004 1.467 010247 CC 7 4 11 CT 10 11 21 TT 6 8 14 0.381 0.004 0.317 010345 -- 0 0 0 +- 1 0 1 ++ 23 23 46 0.011 0.000 0.005 010852 CC 0 0 0 CT 1 0 1 TT 21 23 44 0.012 0.000 0.006 010940 AA 22 23 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 011185 CC 0 0 0 CT 1 2 3 TT 23 17 40 0.011 0.059 0.056 011372 CC 23 20 43 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 011990 -- 12 13 25 +- 6 7 13 ++ 2 1 3 0.800 0.002 0.491 011993 -- 1 0 1 +- 8 8 16 ++ 13 12 25 0.027 1.250 0.724 012066 AA 24 20 44 AC 0 1 1 CC 0 0 0 0.000 0.012 0.006 012457 CC 15 10 25 CT 5 7 12 TT 0 1 1 0.408 0.025 0.098 013222 GG 0 0 0 GT 1 0 1 TT 20 18 38 0.012 0.000 0.007 013566 -- 0 0 0 +- 2 0 2 ++ 21 21 42 0.048 0.000 0.024 013925 AA 2 1 3 AG 8 8 16 GG 14 14 28 0.296 0.011 0.120 013966 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 014156 CC 19 14 33 CT 5 6 11 TT 0 1 1 0.324 0.114 0.005 014162 CC 23 18 41 CT 1 3 4 TT 0 0 0 0.011 0.124 0.097 014330 GG 14 14 28 GT 7 8 15 TT 3 1 4 1.642 0.011 0.876 014652 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 014957 GG 23 23 46 GT 1 0 1 TT 0 0 0 0.011 0.000 0.005 014987 GG 21 23 44 GT 2 0 2 TT 1 0 1 4.959 0.000 10.729 016740 AA 0 0 0 AT 1 0 1 TT 22 23 45 0.011 0.000 0.006 016967 AA 0 0 0 AG 8 8 16 GG 15 13 28 1.019 1.163 2.173 016970 AA 20 21 41 AC 3 0 3 CC 0 0 0 0.112 0.000 0.055 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 005153: T 010345: AAG 011990: C 011993: TG 013566: TTGACTAG