Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000234 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 000352 00000 ------------ G 0.64 0.52 0.58 A 0.36 0.48 0.42 0000 --- --- --- --- 000636 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000709 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 001184 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001631 00000 ------------ - 0.50 0.75 0.63 + 0.50 0.25 0.37 0000 --- --- --- --- 002081 00275 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002372 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 002502 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002762 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 002860 00000 ------------ G 0.67 0.52 0.60 A 0.33 0.48 0.40 0000 --- --- --- --- 002930 00000 ------------ T 0.83 0.74 0.78 C 0.17 0.26 0.22 0000 --- --- --- --- 002940 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002952 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003252 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 003481 00000 ------------ G 0.50 0.76 0.61 C 0.50 0.24 0.39 0000 --- --- --- --- 003525 00000 ------------ C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 003948 00000 ------------ A 0.83 0.74 0.79 G 0.17 0.26 0.21 0000 --- --- --- --- 004017 00000 ------------ A 0.78 0.74 0.76 C 0.22 0.26 0.24 0000 --- --- --- --- 004038 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 004087 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004107 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 004336 00000 ------------ G 0.66 0.52 0.59 A 0.34 0.48 0.41 0000 --- --- --- --- 004393 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004617 00000 ------------ A 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 004925 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005072 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005128 00000 ------------ T 0.81 0.74 0.78 G 0.19 0.26 0.22 0000 --- --- --- --- 005159 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005210 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005276 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005428 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005472 00000 ------------ G 0.65 0.53 0.60 A 0.35 0.47 0.40 0000 --- --- --- --- 005480 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 005515 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005580 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005681 00000 ------------ A 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 005695 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005708 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005944 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 006090 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006695 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 006708 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006963 00000 ------------ A 0.71 0.74 0.72 G 0.29 0.26 0.28 0000 --- --- --- --- 006992 00000 ------------ G 0.65 0.50 0.57 A 0.35 0.50 0.43 0000 --- --- --- --- 007764 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007881 00000 ------------ T 0.81 1.00 0.91 C 0.19 0.00 0.09 0000 --- --- --- --- 007940 00000 ------------ G 0.83 1.00 0.92 T 0.17 0.00 0.08 0000 --- --- --- --- 007966 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008076 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008149 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 008470 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008649 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009061 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 009113 00000 ------------ C 0.48 0.80 0.64 A 0.52 0.20 0.36 0000 --- --- --- --- 009247 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009918 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 010217 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010635 00000 ------------ A 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 010709 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011084 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011471 00000 ------------ - 0.16 0.21 0.18 + 0.84 0.79 0.82 0000 --- --- --- --- 011489 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011498 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012231 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013127 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013435 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 013512 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013520 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014244 00000 ------------ A 0.84 0.59 0.72 G 0.16 0.41 0.28 0000 --- --- --- --- 014336 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 014572 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014594 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014836 00000 ------------ A 0.54 0.73 0.63 G 0.46 0.27 0.37 0000 --- --- --- --- 015261 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 015865 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016005 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016351 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016596 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 017049 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 017220 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017272 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017702 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 017840 00000 ------------ C 0.92 0.76 0.84 A 0.08 0.24 0.16 0000 --- --- --- --- 018141 00000 ------------ A 0.92 0.93 0.93 T 0.08 0.07 0.07 0000 --- --- --- --- 018583 00859 SYNON T 1.00 0.98 0.99 G 0.00 0.02 0.01 0172 TCT TCG SER(S) SER(S) 018836 01112 NON-SYN G 1.00 0.97 0.99 T 0.00 0.03 0.01 0257 GTG TTG VAL(V) LEU(L) 019302 01578 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0412 TCT TAT SER(S) TYR(Y) 019389 01665 3' UTR T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 020711 02987 3' UTR A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020741 03017 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020813 03089 3' UTR T 0.83 0.67 0.76 C 0.17 0.33 0.24 0000 --- --- --- --- 020871 03147 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021052 03328 3' UTR A 0.85 0.80 0.83 C 0.15 0.20 0.17 0000 --- --- --- --- 021185 03461 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021252 03528 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021781 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022157 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022247 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 022492 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022688 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 023029 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 023094 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 023283 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 023319 00000 ------------ A 0.93 0.75 0.84 T 0.07 0.25 0.16 0000 --- --- --- --- 023528 00000 ------------ A 0.80 0.75 0.77 T 0.20 0.25 0.23 0000 --- --- --- --- 023685 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023765 00000 ------------ C 0.95 0.77 0.86 T 0.05 0.23 0.14 0000 --- --- --- --- 023859 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 024372 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 024408 00000 ------------ G 0.91 0.76 0.84 A 0.09 0.24 0.16 0000 --- --- --- --- 024509 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 024643 00000 ------------ T 0.85 0.78 0.82 C 0.15 0.22 0.18 0000 --- --- --- --- 024649 00000 ------------ C 0.83 0.78 0.80 A 0.17 0.22 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001631: GGCCGCGGGAAGC 005944: AT 011471: T 011498: T 016005: TCTT