Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000253 A 19 7 26 C 27 35 62 000309 C 30 13 43 G 18 33 51 000959 A 1 0 1 G 47 44 91 001162 C 1 0 1 T 45 42 87 001423 T 23 13 36 C 23 33 56 001985 C 3 0 3 G 45 46 91 002028 A 6 4 10 G 36 42 78 002045 G 2 0 2 A 42 46 88 002322 C 1 0 1 G 47 46 93 002348 A 5 6 11 C 43 40 83 002776 A 21 14 35 G 27 30 57 002920 T 5 0 5 C 43 44 87 002951 A 5 1 6 G 43 43 86 003044 C 3 2 5 G 45 42 87 003138 A 0 2 2 C 48 44 92 003139 G 0 2 2 A 48 44 92 003142 G 0 2 2 C 48 44 92 003159 + 0 2 2 - 48 44 92 003267 T 13 8 21 G 35 34 69 003276 A 3 0 3 C 45 42 87 003576 T 2 0 2 C 46 46 92 003637 C 0 5 5 T 48 41 89 003793 T 29 16 45 C 19 30 49 003813 A 29 16 45 G 19 30 49 003824 C 29 16 45 G 19 30 49 004377 T 9 10 19 G 35 32 67 004392 A 0 1 1 G 44 41 85 004873 - 0 1 1 + 40 39 79 005006 A 1 0 1 G 47 46 93 005046 C 11 12 23 T 37 34 71 005099 G 9 12 21 C 37 34 71 005212 C 11 12 23 T 37 34 71 005225 G 5 3 8 A 43 43 86 005228 A 1 0 1 C 47 46 93 005230 C 11 12 23 T 37 34 71 005299 G 1 0 1 C 47 46 93 005434 A 1 0 1 T 47 46 93 007038 C 9 4 13 A 39 42 81 007043 G 7 4 11 T 41 42 83 007161 A 26 17 43 C 22 29 51 007172 T 2 1 3 C 46 45 91 007282 C 17 25 42 G 31 21 52 007325 T 3 0 3 C 45 46 91 007330 C 1 0 1 T 47 46 93 007341 C 3 7 10 T 45 39 84 007430 A 7 5 12 G 41 41 82 007494 G 1 0 1 A 47 46 93 007498 + 9 13 22 - 39 33 72 007945 G 1 0 1 A 47 44 91 008280 G 5 4 9 A 43 42 85 008342 A 1 0 1 G 45 46 91 008444 G 1 0 1 A 45 46 91 008530 G 5 7 12 A 41 39 80 008591 C 8 16 24 G 38 30 68 008801 G 11 18 29 T 35 28 63 008810 T 10 17 27 G 36 29 65 008922 T 10 18 28 C 36 28 64 008936 C 12 17 29 T 34 27 61 009075 G 0 1 1 C 48 41 89 009265 - 11 16 27 + 37 26 63 019879 A 2 3 5 T 44 41 85 019931 G 3 2 5 A 43 42 85 019966 A 35 5 40 G 11 39 50 020138 T 8 0 8 C 40 46 86 020241 + 37 5 42 - 11 41 52 020405 C 1 0 1 T 47 46 93 030528 C 6 0 6 T 34 46 80 030551 T 1 0 1 C 43 46 89 030599 A 26 5 31 G 18 41 59 030684 A 2 0 2 G 42 46 88 030748 G 38 5 43 T 10 41 51 030949 G 8 0 8 A 38 46 84 031019 G 3 0 3 C 41 46 87 031053 C 0 1 1 T 46 45 91 031073 A 1 0 1 G 45 46 91 055875 A 8 8 16 C 40 38 78 056039 G 0 1 1 T 48 45 93 056574 A 1 0 1 G 47 46 93 056626 A 1 3 4 G 47 43 90 056828 C 2 0 2 T 46 44 90 056848 G 6 7 13 A 40 37 77 064995 A 2 1 3 G 44 43 87 071447 A 2 0 2 G 42 46 88 071603 A 28 15 43 G 14 29 43 071629 G 1 0 1 A 41 44 85 071675 T 20 13 33 C 22 31 53 071904 + 9 4 13 - 33 40 73 072060 T 0 2 2 A 46 44 90 072205 G 2 0 2 A 44 46 90 072213 T 18 13 31 C 28 33 61 072268 T 13 11 24 A 33 35 68 072275 T 2 0 2 A 42 46 88 072342 T 2 0 2 G 42 46 88 072546 G 1 0 1 C 43 42 85 072588 - 2 0 2 + 46 42 88 072616 G 1 0 1 A 47 42 89 072679 G 5 2 7 A 43 44 87 072896 C 25 15 40 T 17 29 46 072897 A 1 0 1 G 45 44 89 072932 A 28 15 43 G 18 29 47 072976 C 26 15 41 T 18 29 47 072995 T 0 1 1 C 46 43 89 073069 C 30 15 45 T 18 29 47 073073 T 11 9 20 C 37 35 72 073266 T 5 6 11 C 37 40 77 073295 A 1 0 1 C 43 46 89 073360 T 1 0 1 G 43 46 89 073478 G 29 17 46 A 19 29 48 073535 A 12 10 22 G 36 36 72 073560 T 26 17 43 C 22 29 51 073880 T 8 4 12 C 40 42 82 073904 A 4 19 23 G 44 27 71 073939 C 1 0 1 T 47 46 93 074113 T 6 17 23 G 42 27 69 081399 T 2 0 2 C 44 46 90 081400 A 9 20 29 G 37 26 63 081855 T 1 0 1 G 47 46 93 081899 A 5 9 14 G 43 37 80 081919 A 1 0 1 G 47 46 93 098515 A 1 0 1 G 45 46 91 098543 C 1 0 1 T 45 46 91 098566 C 2 0 2 T 44 46 90 098573 - 3 10 13 + 43 36 79 098590 G 1 0 1 T 45 46 91 098669 A 1 0 1 G 45 46 91 098704 A 10 21 31 C 36 25 61 098759 G 2 0 2 A 44 46 90 098913 C 2 0 2 T 40 44 84 099198 T 24 15 39 A 18 31 49 099257 C 2 0 2 A 40 46 86 099322 T 1 0 1 C 41 42 83 099549 + 1 0 1 - 47 46 93 099887 T 10 12 22 G 38 34 72 099964 G 1 0 1 A 47 46 93 099985 A 0 2 2 G 48 44 92 100019 G 1 0 1 A 47 46 93 100034 A 1 0 1 G 47 46 93 100227 T 2 0 2 G 44 46 90 100306 C 1 0 1 T 47 46 93 100444 G 8 17 25 A 36 23 59 100718 + 1 0 1 - 43 46 89 100800 C 4 10 14 A 36 36 72 100933 G 0 1 1 A 44 45 89 101080 T 5 10 15 A 39 36 75 101204 T 1 0 1 C 43 46 89 101252 A 5 2 7 G 39 44 83 111535 T 1 0 1 G 45 42 87 111652 T 8 2 10 C 38 42 80 111763 C 8 6 14 T 36 36 72 111834 T 2 0 2 C 46 46 92 111951 T 1 0 1 A 45 46 91 111977 T 9 12 21 G 39 34 73 112046 G 5 0 5 C 41 46 87 112088 T 1 0 1 C 47 46 93 112263 T 1 7 8 C 47 39 86 124987 C 6 2 8 T 42 42 84 125000 - 6 20 26 + 42 26 68 125013 G 1 0 1 C 47 44 91 125116 T 2 0 2 G 46 44 90 125146 C 3 0 3 G 45 44 89 125391 A 6 20 26 G 42 26 68 125772 T 0 1 1 C 48 45 93 126151 A 1 0 1 G 47 46 93 126580 C 6 22 28 T 42 24 66 127042 T 1 6 7 C 45 38 83 127043 T 6 16 22 C 40 28 68 127258 A 2 16 18 G 40 30 70 140519 A 0 2 2 G 46 44 90 140579 A 15 13 28 G 31 33 64 140686 G 4 0 4 A 44 46 90 140923 C 1 0 1 T 47 46 93 141102 A 10 6 16 G 38 36 74 141181 C 1 0 1 G 47 44 91 141416 C 6 0 6 T 42 46 88 141588 G 6 0 6 C 42 46 88 141658 A 10 6 16 G 38 40 78 148010 A 1 7 8 G 37 37 74 148318 T 4 12 16 C 34 32 66 148328 G 1 7 8 A 39 37 76 148537 + 12 5 17 - 32 35 67 148606 A 7 3 10 C 39 41 80 148609 C 2 0 2 T 44 44 88 148694 G 7 11 18 A 39 33 72 148704 A 2 0 2 G 44 44 88 156228 T 0 1 1 G 38 43 81 156320 A 1 0 1 G 39 44 83 156325 T 1 0 1 C 39 44 83 156655 A 4 0 4 G 42 42 84 156748 T 0 2 2 C 46 40 86 164879 G 1 0 1 C 39 46 85 165013 G 19 13 32 C 29 33 62 165038 A 5 13 18 G 43 33 76 165160 G 0 1 1 C 48 43 91 165230 T 19 11 30 C 29 33 62 165306 A 8 12 20 C 40 32 72 165399 C 20 19 39 T 26 23 49 170717 A 7 12 19 T 37 28 65 170779 T 3 9 12 G 43 37 80 170976 C 8 13 21 G 38 33 71 171047 A 2 4 6 G 44 42 86 171050 C 8 13 21 G 38 33 71 171180 A 8 13 21 G 38 33 71 171235 A 8 13 21 G 38 31 69 171368 G 8 8 16 A 36 34 70 176866 G 14 9 23 A 34 37 71 176884 C 10 0 10 T 38 46 84 177424 G 10 0 10 A 38 46 84 177447 T 9 0 9 G 35 44 79 177461 T 14 22 36 C 30 18 48 177495 A 13 8 21 G 33 32 65 177556 A 10 0 10 G 38 42 80 177778 A 0 3 3 G 48 43 91 177920 A 1 0 1 T 47 46 93 178078 A 10 0 10 G 38 46 84 178330 T 4 9 13 G 44 37 81 178380 G 0 2 2 C 48 44 92 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 003159: ACCTTAGGCGTGGTTG 004873: A 007498: A 009265: AAAC 020241: T 071904: T 072588: AAGG 098573: CCA 099549: G 100718: T 125000: CT 148537: TTC