Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000198 C 3 0 3 G 41 46 87 000386 C 2 0 2 G 40 46 86 000461 C 1 0 1 T 43 46 89 000497 T 2 0 2 C 42 44 86 000688 C 2 0 2 T 42 46 88 000696 A 2 0 2 G 42 46 88 000721 C 2 0 2 T 46 46 92 000764 T 12 17 29 A 36 29 65 001428 T 2 0 2 C 46 46 92 001490 G 3 16 19 A 45 30 75 001491 G 0 3 3 T 46 43 89 001522 C 2 0 2 T 46 46 92 001580 G 1 1 2 C 43 45 88 001735 G 7 0 7 C 39 44 83 001751 A 1 1 2 G 45 45 90 001909 T 2 0 2 C 40 46 86 001927 - 1 14 15 + 33 32 65 001938 C 3 13 16 A 39 33 72 002047 + 3 0 3 - 41 46 87 002262 T 0 6 6 C 40 40 80 002388 T 22 9 31 G 24 37 61 002518 G 20 9 29 C 26 37 63 002780 A 2 0 2 G 44 46 90 002952 A 12 15 27 G 36 31 67 003213 - 0 1 1 + 40 41 81 003428 + 1 0 1 - 47 46 93 003450 C 2 12 14 T 46 34 80 003483 G 3 17 20 T 45 29 74 003532 - 5 6 11 + 43 40 83 003543 A 16 20 36 C 32 26 58 004138 T 2 0 2 C 46 40 86 004197 T 0 2 2 G 46 38 84 004333 C 0 1 1 T 48 37 85 004376 G 0 2 2 T 48 36 84 004685 T 17 20 37 A 31 26 57 004686 T 1 0 1 A 47 46 93 004717 G 1 1 2 A 47 45 92 004925 C 2 0 2 A 46 46 92 004937 C 1 0 1 T 47 46 93 005090 C 1 0 1 G 47 46 93 005096 C 1 0 1 G 47 46 93 005131 T 1 0 1 C 47 46 93 005785 T 1 0 1 C 47 46 93 005798 A 9 0 9 G 39 46 85 006012 G 2 0 2 A 46 46 92 006039 G 0 1 1 C 48 45 93 006117 G 2 0 2 A 46 46 92 006201 G 3 14 17 A 45 32 77 006266 G 4 0 4 A 44 46 90 006515 A 8 0 8 G 40 46 86 006675 C 2 0 2 T 46 46 92 006703 G 8 0 8 A 40 46 86 006783 T 0 6 6 G 48 40 88 007178 G 13 20 33 A 35 24 59 007393 T 2 0 2 C 46 46 92 007675 G 8 0 8 T 40 46 86 007872 T 18 19 37 C 30 27 57 008069 C 8 0 8 T 40 46 86 008699 A 5 6 11 T 43 40 83 008706 G 1 0 1 A 47 46 93 008720 T 1 0 1 A 47 46 93 009249 A 0 6 6 G 46 40 86 010076 T 11 13 24 C 35 33 68 010350 G 1 0 1 C 31 44 75 010541 T 6 0 6 C 26 44 70 010942 T 6 6 12 A 42 40 82 011001 C 7 1 8 T 37 43 80 011187 C 7 1 8 T 39 43 82 011233 * 011598 T 6 0 6 A 40 44 84 011809 A 2 0 2 G 42 46 88 011901 A 15 26 41 G 29 20 49 011971 T 1 11 12 C 43 35 78 012151 T 7 0 7 C 37 46 83 012244 C 1 2 3 T 41 44 85 012552 A 3 0 3 C 43 44 87 013334 T 1 3 4 A 29 39 68 013385 T 11 23 34 C 19 19 38 014205 A 2 0 2 G 46 38 84 014396 C 3 16 19 T 45 18 63 014501 A 7 0 7 C 41 30 71 014888 A 0 5 5 G 48 41 89 015151 A 1 0 1 C 47 46 93 015279 G 6 9 15 A 42 37 79 015895 G 0 1 1 C 46 45 91 016234 G 8 0 8 C 40 46 86 016392 G 28 13 41 A 20 33 53 016602 G 5 4 9 A 25 40 65 016918 T 2 0 2 G 28 44 72 017515 A 8 0 8 C 38 44 82 017645 T 7 0 7 C 41 46 87 017794 T 2 0 2 C 46 46 92 018184 A 8 0 8 G 40 46 86 018290 C 1 0 1 T 47 42 89 018367 A 8 0 8 G 40 46 86 018490 A 2 0 2 G 40 42 82 019109 T 1 0 1 C 47 46 93 019400 T 1 0 1 C 47 46 93 019404 T 1 0 1 C 45 46 91 019642 A 1 0 1 G 47 46 93 020157 T 2 0 2 C 46 44 90 020276 A 1 0 1 G 47 46 93 020327 A 3 6 9 G 45 40 85 020392 G 11 9 20 C 37 37 74 020423 G 10 9 19 A 38 37 75 020691 C 8 4 12 T 40 42 82 021102 A 0 1 1 T 48 43 91 021319 T 3 6 9 C 45 38 83 021570 A 28 13 41 G 20 33 53 021639 A 11 17 28 C 37 29 66 021647 T 8 0 8 A 40 46 86 021708 G 2 0 2 C 46 46 92 022173 T 0 1 1 G 48 45 93 022454 G 2 0 2 A 46 46 92 022744 T 5 0 5 C 39 46 85 022771 T 11 17 28 C 33 29 62 022925 T 5 0 5 G 39 46 85 024250 A 2 0 2 G 40 40 80 024358 T 2 0 2 C 40 42 82 024453 + 5 0 5 - 37 42 79 024616 A 23 13 36 G 19 29 48 024618 A 10 9 19 G 24 33 57 024660 C 1 0 1 T 41 42 83 024950 G 5 0 5 A 37 44 81 025093 T 5 0 5 G 37 40 77 025245 T 1 0 1 C 41 42 83 025424 G 8 8 16 A 34 34 68 025455 C 21 12 33 G 21 30 51 025481 A 7 0 7 G 35 42 77 025638 T 26 13 39 A 20 33 53 026011 A 7 4 11 G 37 42 79 026044 A 0 1 1 G 42 45 87 026260 T 21 12 33 C 21 32 53 026380 T 21 12 33 C 21 32 53 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001927: TAGTCCCAGCT 002047: AAAG 003213: CA 003428: AGGAGGG 003532: TA 011233: AAA 024453: T Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 011233 - 0 1 1 + 2 0 2 + 44 43 87