Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000063 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000067 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000473 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000607 00000 ------------ A 0.69 0.89 0.79 G 0.31 0.11 0.21 0000 --- --- --- --- 000835 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000877 00000 ------------ A 0.85 0.93 0.89 C 0.15 0.07 0.11 0000 --- --- --- --- 001266 00000 ------------ A 0.67 0.89 0.77 G 0.33 0.11 0.23 0000 --- --- --- --- 001726 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002026 00027 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002192 00193 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002363 00364 NON-SYN C 0.85 0.93 0.89 T 0.15 0.07 0.11 0005 ACG ATG THR(T) MET(M) 002845 00000 ------------ T 0.62 0.89 0.76 C 0.38 0.11 0.24 0000 --- --- --- --- 002885 00000 ------------ C 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 003231 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003233 00000 ------------ T 0.33 0.83 0.58 C 0.67 0.17 0.42 0000 --- --- --- --- 003766 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004072 00000 ------------ T 0.32 0.83 0.58 C 0.68 0.17 0.42 0000 --- --- --- --- 004079 00000 ------------ A 0.64 0.89 0.77 G 0.36 0.11 0.23 0000 --- --- --- --- 004180 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004248 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004320 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004628 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 004896 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004970 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 005123 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005255 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005597 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005600 00000 ------------ A 0.69 0.89 0.79 G 0.31 0.11 0.21 0000 --- --- --- --- 005924 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006319 00000 ------------ T 0.70 0.89 0.79 G 0.30 0.11 0.21 0000 --- --- --- --- 006525 00000 ------------ T 0.85 0.93 0.89 C 0.15 0.07 0.11 0000 --- --- --- --- 006601 00000 ------------ T 0.33 0.83 0.57 G 0.67 0.17 0.43 0000 --- --- --- --- 006766 00000 ------------ T 0.71 0.89 0.80 G 0.29 0.11 0.20 0000 --- --- --- --- 007079 00000 ------------ T 0.28 0.80 0.54 C 0.72 0.20 0.46 0000 --- --- --- --- 007461 00000 ------------ G 0.57 0.85 0.71 C 0.43 0.15 0.29 0000 --- --- --- --- 007605 00000 ------------ A 0.29 0.80 0.54 C 0.71 0.20 0.46 0000 --- --- --- --- 007888 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008115 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 008198 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008259 00000 ------------ G 0.85 0.93 0.89 C 0.15 0.07 0.11 0000 --- --- --- --- 008376 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008443 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008539 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008622 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008930 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008969 00000 ------------ A 0.43 0.80 0.61 G 0.57 0.20 0.39 0000 --- --- --- --- 009067 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009145 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009236 00000 ------------ A 0.69 0.89 0.78 G 0.31 0.11 0.22 0000 --- --- --- --- 009240 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009255 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009658 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 010038 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 010076 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010085 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010446 00000 ------------ C 0.70 0.86 0.78 T 0.30 0.14 0.22 0000 --- --- --- --- 010545 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010632 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010688 00000 ------------ A 0.65 0.86 0.75 C 0.35 0.14 0.25 0000 --- --- --- --- 010852 00000 ------------ C 0.31 0.86 0.58 A 0.69 0.14 0.42 0000 --- --- --- --- 011272 00000 ------------ A 0.65 0.87 0.76 G 0.35 0.13 0.24 0000 --- --- --- --- 011346 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 011466 00000 ------------ C 0.25 0.87 0.55 A 0.75 0.13 0.45 0000 --- --- --- --- 011496 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011625 00000 ------------ C 0.71 0.87 0.79 T 0.29 0.13 0.21 0000 --- --- --- --- 011626 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013204 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 013245 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013307 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013512 00470 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0040 GGC GGT GLY(G) GLY(G) 013599 00557 SYNON G 0.63 0.87 0.75 A 0.37 0.13 0.25 0069 CTG CTA LEU(L) LEU(L) 013636 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 014061 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014119 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014153 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 014279 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014335 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014833 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014845 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014981 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015052 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015339 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015532 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 015852 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016577 00000 ------------ C 0.77 0.50 0.63 T 0.23 0.50 0.37 0000 --- --- --- --- 016689 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 016755 00000 ------------ C 0.57 0.87 0.72 T 0.43 0.13 0.28 0000 --- --- --- --- 016861 00000 ------------ G 0.75 0.26 0.50 A 0.25 0.74 0.50 0000 --- --- --- --- 017144 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017152 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 017244 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 017380 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017389 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 017409 00000 ------------ G 0.31 0.87 0.59 A 0.69 0.13 0.41 0000 --- --- --- --- 017501 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017528 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017708 00000 ------------ G 0.92 0.54 0.73 A 0.08 0.46 0.27 0000 --- --- --- --- 018559 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 019057 00000 ------------ G 1.00 0.89 0.94 A 0.00 0.11 0.06 0000 --- --- --- --- 019335 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019759 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019899 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020091 00000 ------------ C 0.39 0.89 0.64 T 0.61 0.11 0.36 0000 --- --- --- --- 020469 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 020715 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020754 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020802 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020890 00000 ------------ C 1.00 0.63 0.82 T 0.00 0.37 0.18 0000 --- --- --- --- 022917 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 023347 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023764 00000 ------------ C 1.00 0.72 0.86 A 0.00 0.28 0.14 0000 --- --- --- --- 023782 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023899 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027070 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 027654 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 027912 00000 ------------ C 0.61 0.72 0.67 G 0.39 0.28 0.33 0000 --- --- --- --- 027944 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 028183 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 028324 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029141 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029162 00000 ------------ G 0.94 0.66 0.82 A 0.06 0.34 0.17 0000 --- --- --- --- 029670 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029705 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030463 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030848 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 030926 00922 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0191 GGC GAC GLY(G) ASP(D) 031316 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031996 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 032093 00000 ------------ T 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 032360 01410 SYNON C 0.89 1.00 0.95 T 0.11 0.00 0.05 0354 CTG TTG LEU(L) LEU(L) 032922 00000 ------------ C 1.00 0.72 0.86 G 0.00 0.28 0.14 0000 --- --- --- --- 033500 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033569 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033844 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033986 00000 ------------ A 0.73 0.96 0.84 G 0.27 0.04 0.16 0000 --- --- --- --- 034098 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 034181 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 034203 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034320 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034495 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 036594 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 037210 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 037294 00000 ------------ C 0.89 0.43 0.66 T 0.11 0.57 0.34 0000 --- --- --- --- 038742 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 038924 00000 ------------ A 0.56 0.61 0.59 G 0.44 0.39 0.41 0000 --- --- --- --- 038935 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039113 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 039207 00000 ------------ G 0.57 0.61 0.59 C 0.43 0.39 0.41 0000 --- --- --- --- 039361 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 039378 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 039418 00000 ------------ G 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 039817 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 040195 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 040199 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 040392 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 040613 00000 ------------ T 0.65 0.61 0.63 C 0.35 0.39 0.37 0000 --- --- --- --- 040737 02144 SYNON T 0.94 1.00 0.97 C 0.06 0.00 0.03 0598 GGT GGC GLY(G) GLY(G) 041376 02783 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041521 02928 3' UTR - 0.02 0.05 0.03 + 0.98 0.95 0.97 0000 --- --- --- --- 041992 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 042049 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 042163 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042230 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 042241 00000 ------------ T 0.93 0.67 0.80 C 0.07 0.33 0.20 0000 --- --- --- --- 042407 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042420 00000 ------------ T 0.67 0.67 0.67 G 0.33 0.33 0.33 0000 --- --- --- --- 042505 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 042541 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 042626 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 042691 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 042916 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042942 00000 ------------ A 0.58 0.67 0.63 G 0.42 0.33 0.37 0000 --- --- --- --- 043597 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 043658 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 009658: AGAG 041521: AACT 042049: TGTGACTGTAGGC 042691: AA