Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000063 A 1 0 1 G 47 46 93 000067 T 1 0 1 G 47 46 93 000473 T 0 1 1 C 48 45 93 000607 G 15 5 20 A 33 41 74 000835 G 0 1 1 C 48 45 93 000877 C 7 3 10 A 41 43 84 001266 G 16 5 21 A 32 39 71 001726 A 1 0 1 C 47 46 93 002026 A 1 0 1 G 47 46 93 002192 T 1 0 1 C 47 46 93 002363 T 7 3 10 C 41 43 84 002845 C 18 5 23 T 30 41 71 002885 T 7 3 10 C 41 43 84 003231 A 0 1 1 G 46 45 91 003233 C 31 8 39 T 15 38 53 003766 T 2 0 2 C 46 46 92 004072 C 30 8 38 T 14 38 52 004079 G 16 5 21 A 28 41 69 004180 C 0 1 1 G 48 45 93 004248 T 1 0 1 C 47 46 93 004320 T 1 0 1 C 47 46 93 004628 T 1 1 2 C 45 43 88 004896 A 1 0 1 G 47 46 93 004970 A 7 0 7 G 41 46 87 005123 C 1 0 1 A 45 42 87 005255 T 2 0 2 G 44 46 90 005597 C 0 1 1 T 48 45 93 005600 G 15 5 20 A 33 41 74 005924 A 1 0 1 G 47 46 93 006319 G 14 5 19 T 32 39 71 006525 C 7 3 10 T 41 43 84 006601 G 32 8 40 T 16 38 54 006766 G 14 5 19 T 34 41 75 007079 C 33 9 42 T 13 37 50 007461 C 18 6 24 G 24 34 58 007605 C 34 9 43 A 14 37 51 007888 T 5 0 5 C 43 44 87 008115 T 8 0 8 C 40 46 86 008198 A 1 0 1 G 47 46 93 008259 C 7 3 10 G 41 43 84 008376 A 1 0 1 C 47 46 93 008443 T 1 0 1 C 47 46 93 008539 A 1 0 1 G 45 44 89 008622 A 2 0 2 G 44 44 88 008930 C 0 1 1 G 46 43 89 008969 G 26 9 35 A 20 35 55 009067 A 1 0 1 G 45 44 89 009145 A 1 0 1 G 45 44 89 009236 G 15 5 20 A 33 39 72 009240 G 1 0 1 A 47 44 91 009255 A 2 0 2 G 46 44 90 009658 - 0 2 2 + 42 38 80 010038 T 3 1 4 C 45 45 90 010076 C 0 1 1 T 48 45 93 010085 G 1 0 1 C 47 46 93 010446 T 14 6 20 C 32 38 70 010545 T 2 0 2 G 44 44 88 010632 C 1 0 1 A 45 44 89 010688 C 17 6 23 A 31 38 69 010852 A 33 6 39 C 15 38 53 011272 G 17 6 23 A 31 40 71 011346 A 4 0 4 G 44 46 90 011466 A 36 6 42 C 12 40 52 011496 A 1 0 1 G 47 46 93 011625 T 14 6 20 C 34 40 74 011626 A 0 1 1 G 48 45 93 013204 G 5 0 5 A 41 46 87 013245 C 2 0 2 T 44 46 90 013307 C 0 1 1 G 46 45 91 013512 T 0 1 1 C 46 45 91 013599 A 17 6 23 G 29 40 69 013636 T 4 0 4 G 38 42 80 014061 T 0 1 1 C 48 45 93 014119 T 2 0 2 C 46 44 90 014153 C 7 0 7 A 41 46 87 014279 T 3 0 3 A 45 42 87 014335 T 1 0 1 C 47 42 89 014833 T 2 0 2 C 46 42 88 014845 T 1 0 1 C 47 42 89 014981 G 0 1 1 A 48 41 89 015052 A 1 0 1 G 47 42 89 015339 T 2 0 2 G 46 46 92 015532 A 6 0 6 G 42 46 88 015852 T 1 0 1 C 47 46 93 016577 T 10 23 33 C 34 23 57 016689 T 7 0 7 C 37 46 83 016755 T 19 6 25 C 25 40 65 016861 A 11 34 45 G 33 12 45 017144 G 1 0 1 A 43 46 89 017152 C 0 1 1 A 44 45 89 017244 T 3 0 3 C 45 46 91 017380 T 1 0 1 C 47 46 93 017389 C 0 2 2 T 48 44 92 017409 A 33 6 39 G 15 40 55 017501 A 4 0 4 G 44 46 90 017528 A 3 0 3 G 45 46 91 017708 A 4 21 25 G 44 25 69 018559 A 2 0 2 G 42 44 86 019057 A 0 5 5 G 46 39 85 019335 C 2 0 2 A 44 44 88 019759 T 1 0 1 C 47 42 89 019899 A 1 0 1 C 47 42 89 020091 T 28 5 33 C 18 41 59 020469 A 6 0 6 G 42 44 86 020715 C 3 0 3 T 45 46 91 020754 T 3 0 3 C 45 46 91 020802 T 3 0 3 A 45 46 91 020890 T 0 17 17 C 48 29 77 022917 A 3 0 3 G 37 42 79 023347 A 1 0 1 G 43 44 87 023764 A 0 13 13 C 48 33 81 023782 T 1 0 1 C 47 46 93 023899 C 1 0 1 T 47 46 93 027070 T 4 0 4 C 44 46 90 027654 G 2 0 2 C 30 46 76 027912 G 17 13 30 C 27 33 60 027944 A 4 0 4 G 42 46 88 028183 T 1 2 3 C 47 38 85 028324 G 1 0 1 A 47 40 87 029141 C 1 0 1 A 47 32 79 029162 A 3 11 14 G 45 21 66 029670 A 1 0 1 G 45 46 91 029705 G 2 0 2 C 44 46 90 030463 T 1 0 1 C 45 46 91 030848 A 3 0 3 G 45 46 91 030926 A 0 1 1 G 48 45 93 031316 T 1 0 1 G 47 46 93 031996 T 3 0 3 A 29 40 69 032093 A 0 2 2 T 34 38 72 032360 T 4 0 4 C 34 46 80 032922 G 0 13 13 C 48 33 81 033500 T 1 0 1 G 47 46 93 033569 A 1 0 1 G 47 46 93 033844 T 1 0 1 C 45 46 91 033986 G 13 2 15 A 35 44 79 034098 G 1 2 3 A 47 44 91 034181 C 3 0 3 T 45 46 91 034203 C 1 0 1 A 47 46 93 034320 C 1 0 1 T 47 46 93 034495 C 0 1 1 G 48 45 93 036594 C 1 0 1 T 47 46 93 037210 G 3 0 3 A 35 42 77 037294 T 5 26 31 C 39 20 59 038742 T 3 0 3 G 41 42 83 038924 G 21 18 39 A 27 28 55 038935 G 0 1 1 A 48 45 93 039113 C 3 0 3 T 43 46 89 039207 C 20 18 38 G 26 28 54 039361 T 0 1 1 C 48 45 93 039378 C 5 0 5 G 43 46 89 039418 A 0 14 14 G 48 32 80 039817 C 3 0 3 G 45 46 91 040195 T 4 0 4 C 44 46 90 040199 C 3 0 3 T 45 46 91 040392 T 7 0 7 C 39 46 85 040613 C 17 18 35 T 31 28 59 040737 C 3 0 3 T 45 46 91 041376 A 1 0 1 G 47 42 89 041521 - 1 2 3 + 47 40 87 041992 A 2 0 2 G 42 44 86 042049 - 1 0 1 + 37 30 67 042163 C 1 0 1 T 45 46 91 042230 T 4 0 4 C 42 46 88 042241 C 3 15 18 T 43 31 74 042407 T 1 0 1 C 45 46 91 042420 G 15 15 30 T 31 31 62 042505 G 4 0 4 T 42 46 88 042541 T 7 0 7 C 39 46 85 042626 T 0 1 1 C 42 45 87 042691 - 8 0 8 + 34 40 74 042916 A 1 0 1 G 47 46 93 042942 G 20 15 35 A 28 31 59 043597 C 1 0 1 G 37 46 83 043658 A 3 0 3 T 37 46 83 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 009658: agag 041521: aact 042049: tgtgactgtaggc 042691: AA