Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000100 T 5 0 5 C 39 46 85 000386 T 2 0 2 C 46 46 92 001171 T 4 0 4 C 44 46 90 001185 C 4 0 4 T 44 46 90 001187 A 4 0 4 G 44 46 90 001385 A 2 0 2 G 46 46 92 001909 - 9 0 9 + 39 46 85 001933 G 1 0 1 T 47 46 93 002248 T 2 0 2 G 46 46 92 002313 C 13 1 14 G 31 45 76 002371 C 8 0 8 A 40 46 86 002474 T 1 0 1 C 47 46 93 002785 G 14 1 15 C 30 41 71 002800 T 14 1 15 A 30 41 71 002820 A 1 0 1 G 43 42 85 003026 T 14 1 15 A 30 43 73 003079 T 19 1 20 G 25 43 68 004405 + 15 1 16 - 25 39 64 004802 C 3 0 3 T 41 46 87 004890 T 1 0 1 G 43 46 89 005171 C 14 1 15 G 34 43 77 005334 G 5 0 5 A 43 46 89 005427 - 1 0 1 + 45 44 89 005500 T 18 1 19 C 28 43 71 005698 T 4 0 4 C 26 34 60 005819 A 18 1 19 G 28 41 69 005830 G 4 0 4 T 42 40 82 006367 A 18 1 19 T 24 45 69 006398 - 5 0 5 + 41 46 87 006975 G 2 0 2 T 40 42 82 007148 C 4 0 4 T 38 42 80 007628 A 5 0 5 G 39 42 81 007901 C 4 0 4 T 38 38 76 008022 C 2 0 2 A 46 44 90 009447 C 14 1 15 T 34 45 79 009454 C 1 0 1 T 47 46 93 009939 A 5 0 5 T 41 46 87 010327 C 26 1 27 T 18 45 63 010360 G 4 0 4 A 38 46 84 010434 A 21 1 22 G 25 45 70 010473 T 10 1 11 C 36 45 81 011648 - 4 0 4 + 34 46 80 011738 C 5 0 5 A 35 38 73 011985 A 1 1 2 G 43 45 88 012146 - 4 0 4 + 40 38 78 012199 A 4 0 4 G 32 40 72 012504 + 4 0 4 - 40 42 82 012542 G 14 1 15 A 30 41 71 012709 C 3 1 4 A 35 45 80 012893 T 12 0 12 C 36 46 82 012996 A 5 0 5 G 43 46 89 013314 A 1 0 1 G 47 44 91 013317 T 34 12 46 C 14 32 46 013684 T 2 0 2 C 40 42 82 013738 T 3 0 3 C 39 42 81 013755 T 3 0 3 C 39 42 81 013884 C 5 0 5 G 37 44 81 013913 T 1 0 1 G 47 46 93 013960 C 4 0 4 G 44 46 90 014176 C 1 0 1 T 37 38 75 015035 A 0 3 3 T 44 39 83 015118 A 1 0 1 T 41 44 85 015430 - 7 14 21 + 35 30 65 015461 G 2 0 2 A 40 42 82 015749 T 2 0 2 A 44 46 90 016143 G 5 0 5 C 41 46 87 016189 G 5 0 5 A 41 46 87 016242 G 0 3 3 A 46 43 89 016329 A 2 0 2 G 44 46 90 016532 A 0 1 1 C 46 43 89 016633 G 1 0 1 A 47 44 91 016723 C 2 0 2 T 46 44 90 017069 A 11 0 11 G 33 44 77 017334 T 1 0 1 A 43 46 89 017452 C 3 0 3 T 43 46 89 017699 A 5 0 5 T 41 46 87 017954 T 4 0 4 A 42 42 84 018105 G 0 1 1 A 48 39 87 018190 G 4 0 4 T 42 38 80 018193 T 16 0 16 C 32 38 70 018377 T 1 0 1 C 47 40 87 018563 A 2 0 2 G 40 36 76 018874 G 0 1 1 A 46 39 85 019037 T 34 12 46 C 14 32 46 019199 T 5 0 5 C 43 46 89 019326 T 1 0 1 G 45 44 89 019567 C 2 0 2 A 46 46 92 019810 T 5 0 5 C 41 40 81 020222 C 4 12 16 T 28 30 58 020227 C 4 14 18 T 26 30 56 020306 C 0 1 1 G 30 43 73 020477 A 3 0 3 T 27 32 59 020940 G 25 12 37 A 11 34 45 020963 C 7 0 7 A 29 44 73 021156 C 4 0 4 T 32 44 76 021169 C 4 0 4 T 32 44 76 021330 A 2 0 2 G 34 44 78 021502 C 4 0 4 G 32 42 74 021504 C 1 0 1 T 35 42 77 021587 T 0 1 1 G 36 41 77 021689 G 4 0 4 C 34 42 76 021766 C 1 0 1 G 37 42 79 021797 C 0 1 1 T 38 41 79 021918 G 3 0 3 A 35 42 77 022475 C 16 0 16 T 30 42 72 023099 A 0 1 1 C 40 41 81 023135 T 4 0 4 A 36 42 78 023505 C 5 0 5 T 43 46 89 023647 T 0 1 1 C 48 45 93 023689 A 5 0 5 T 43 46 89 024062 A 5 0 5 G 41 46 87 024743 C 5 0 5 T 35 40 75 024966 G 5 0 5 A 41 46 87 025077 A 4 0 4 G 40 40 80 025211 A 9 1 10 G 37 39 76 025363 A 1 1 2 G 37 29 66 026320 C 0 1 1 T 48 45 93 026576 A 1 0 1 G 47 46 93 026691 C 2 0 2 A 44 46 90 026725 T 0 1 1 C 44 45 89 026936 C 5 0 5 T 41 46 87 027403 G 4 0 4 A 40 36 76 027779 A 3 0 3 G 33 24 57 027798 T 1 0 1 C 35 24 59 027969 G 3 0 3 A 41 46 87 028054 C 2 0 2 A 44 46 90 028395 A 12 0 12 G 28 44 72 028717 G 14 0 14 T 34 44 78 029163 A 5 0 5 G 41 44 85 029366 T 4 0 4 C 42 42 84 029585 A 5 0 5 C 43 44 87 030104 A 5 0 5 G 35 46 81 030252 A 2 0 2 C 38 46 84 030451 T 0 1 1 G 40 45 85 030542 G 5 0 5 A 35 46 81 030555 A 0 1 1 G 40 45 85 030799 C 4 0 4 T 40 44 84 030895 A 1 0 1 G 41 44 85 031002 - 4 0 4 + 40 44 84 031062 G 2 0 2 A 40 46 86 031208 C 13 0 13 T 31 44 75 031248 G 9 0 9 A 37 44 81 031322 C 4 0 4 A 42 44 86 031408 A 1 0 1 G 47 46 93 031648 G 5 0 5 A 39 44 83 031725 A 5 0 5 T 39 46 85 032479 G 1 0 1 A 47 46 93 032744 T 5 0 5 C 43 40 83 033291 T 4 0 4 C 42 46 88 033328 A 8 0 8 G 36 46 82 033379 A 1 0 1 G 43 44 87 033617 C 2 0 2 T 42 44 86 033630 G 11 0 11 T 33 44 77 034036 A 0 1 1 C 48 45 93 034426 C 4 0 4 A 42 46 88 034434 G 5 0 5 A 43 46 89 034589 C 14 0 14 T 34 44 78 034607 T 4 0 4 G 44 44 88 034608 T 4 0 4 C 44 44 88 035725 C 4 0 4 T 44 46 90 035730 * 036245 T 0 2 2 C 46 38 84 036262 C 2 0 2 G 44 40 84 036859 G 5 0 5 A 41 46 87 036870 G 5 0 5 T 41 46 87 037085 T 1 0 1 A 37 42 79 037093 T 0 1 1 C 38 41 79 037311 T 3 0 3 G 41 36 77 037319 G 5 1 6 A 39 35 74 037825 T 2 0 2 G 40 38 78 038154 * 038473 G 0 2 2 A 42 44 86 038582 T 10 1 11 C 32 45 77 038612 C 1 0 1 T 43 46 89 038742 T 3 0 3 C 45 46 91 039263 A 9 0 9 G 39 46 85 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001909: a 004405: T 005427: CAAAATAATTGTGGTAGGAT 006398: TCT 011648: CTTTGTAGACT 012146: A 012504: A 015430: ATTA 031002: TCT Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 035730 T 1 0 1 G 14 0 14 A 33 46 79 038154 T 1 2 3 G 15 0 15 A 30 44 74