Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 002049 T 2 10 12 C 42 36 78 002124 - 8 10 18 + 36 36 72 002333 G 16 20 36 A 32 26 58 002462 A 1 0 1 G 47 46 93 002522 + 8 0 8 - 38 46 84 002568 G 1 0 1 C 45 46 91 002879 T 1 0 1 C 45 42 87 003082 T 20 15 35 G 26 27 53 003436 T 1 0 1 G 45 44 89 003685 + 1 1 2 - 43 43 86 003739 A 1 0 1 G 43 44 87 003782 C 1 0 1 T 43 44 87 003786 T 7 17 24 C 37 27 64 004007 G 0 1 1 A 48 43 91 004141 T 2 0 2 A 46 44 90 004256 T 7 0 7 G 41 44 85 004348 A 3 0 3 G 45 44 89 004367 G 3 1 4 A 45 43 88 004402 T 1 0 1 C 47 44 91 004553 T 8 17 25 G 40 27 67 004646 C 2 0 2 T 42 46 88 004656 T 4 10 14 G 44 36 80 004731 G 1 0 1 C 39 44 83 004964 G 1 0 1 A 39 44 83 005468 G 2 1 3 A 40 43 83 005487 G 1 0 1 A 39 44 83 005568 T 1 0 1 C 39 44 83 006456 A 3 0 3 G 35 46 81 006932 G 0 4 4 C 48 42 90 007024 - 2 10 12 + 46 36 82 007038 A 0 1 1 T 46 39 85 007460 + 1 0 1 - 47 46 93 007699 A 0 1 1 G 44 37 81 007960 C 11 9 20 T 33 29 62 008835 T 1 0 1 C 43 34 77 008878 T 11 12 23 A 33 30 63 009182 G 1 2 3 T 41 40 81 009194 T 15 16 31 C 29 28 57 009533 G 15 16 31 C 29 28 57 009539 T 12 10 22 C 32 34 66 010014 T 11 9 20 C 33 27 60 010039 T 11 9 20 G 33 27 60 010201 A 11 9 20 C 33 27 60 010451 G 1 3 4 A 41 37 78 010558 C 10 9 19 T 32 31 63 010744 T 3 0 3 C 39 40 79 010804 C 0 1 1 T 42 39 81 010875 C 11 9 20 G 33 35 68 011005 A 0 1 1 C 40 43 83 011019 A 3 0 3 C 37 44 81 011053 - 10 9 19 + 30 35 65 011100 G 9 9 18 A 29 35 64 011389 A 0 9 9 G 38 35 73 011650 T 1 0 1 C 37 44 81 011714 T 1 0 1 C 37 44 81 011865 G 1 0 1 C 43 42 85 012337 G 11 10 21 A 33 32 65 012416 C 9 9 18 A 31 31 62 012489 + 9 11 20 - 31 29 60 012806 T 0 1 1 C 40 41 81 012942 T 13 18 31 C 31 20 51 013172 G 4 0 4 T 40 38 78 013377 A 12 8 20 G 34 30 64 013776 C 3 0 3 T 41 40 81 013997 T 11 7 18 G 33 35 68 014246 C 1 0 1 T 47 42 89 014274 G 13 7 20 A 35 35 70 014317 C 13 7 20 T 35 35 70 015259 T 5 0 5 G 43 46 89 015296 G 13 10 23 A 35 36 71 015702 T 4 0 4 C 44 46 90 015767 - 13 10 23 + 35 36 71 015921 + 13 10 23 - 35 36 71 016033 C 1 0 1 G 47 46 93 016162 G 8 9 17 A 40 35 75 016198 - 13 20 33 + 35 24 59 016350 G 1 0 1 A 47 44 91 016400 A 13 9 22 G 35 35 70 016407 G 1 0 1 A 47 44 91 016470 A 3 0 3 G 45 44 89 016620 A 13 9 22 T 35 35 70 016692 A 17 15 32 G 31 29 60 016938 A 0 1 1 G 48 43 91 016957 A 0 3 3 G 48 41 89 017035 C 13 8 21 T 35 36 71 017178 A 1 0 1 G 47 44 91 017257 T 1 0 1 C 47 44 91 017469 T 8 8 16 C 40 36 76 017533 A 1 0 1 G 47 44 91 017607 C 1 0 1 T 47 46 93 018185 T 0 1 1 C 48 43 91 018218 A 13 9 22 G 35 35 70 018266 G 13 10 23 A 35 36 71 018530 A 2 0 2 G 40 36 76 018943 T 1 0 1 C 39 40 79 020407 A 3 1 4 G 43 45 88 020710 * 020891 A 10 9 19 G 36 33 69 021622 A 5 0 5 G 43 44 87 021860 C 2 1 3 T 44 39 83 021897 T 0 1 1 C 46 43 89 021956 T 0 4 4 C 46 36 82 022018 C 8 21 29 A 38 25 63 022900 A 5 0 5 G 41 46 87 023059 - 1 0 1 + 47 46 93 023429 A 13 19 32 C 35 25 60 023445 C 5 1 6 A 43 43 86 023818 A 1 0 1 G 39 36 75 024033 G 1 0 1 T 47 46 93 024034 G 8 10 18 A 40 36 76 024051 G 0 1 1 T 48 45 93 024172 C 2 10 12 T 46 36 82 025029 C 4 1 5 G 42 39 81 025302 - 1 0 1 + 47 46 93 025369 T 5 11 16 A 43 35 78 025475 T 1 0 1 G 47 46 93 026671 A 5 2 7 G 39 40 79 026810 A 11 9 20 G 31 33 64 027063 T 1 0 1 C 47 46 93 027093 A 5 0 5 G 43 46 89 027195 A 2 10 12 G 46 36 82 027196 T 13 10 23 G 35 36 71 027753 T 4 0 4 A 42 46 88 028049 C 7 18 25 T 39 28 67 028338 T 5 0 5 C 39 44 83 028426 C 1 0 1 T 45 44 89 028461 A 2 10 12 G 44 34 78 028975 G 3 0 3 C 41 44 85 029107 T 14 15 29 C 30 29 59 029179 A 2 0 2 G 42 44 86 029252 C 1 0 1 T 43 42 85 030700 A 2 1 3 G 42 43 85 030809 T 0 1 1 A 44 43 87 030941 G 5 0 5 C 39 44 83 031167 G 0 3 3 T 44 41 85 031357 - 1 0 1 + 43 44 87 031525 C 1 0 1 T 45 46 91 031865 C 1 0 1 T 47 46 93 032169 G 1 0 1 A 47 46 93 032214 C 9 0 9 T 39 46 85 033043 A 13 20 33 G 35 26 61 033229 A 1 0 1 G 47 42 89 033371 A 5 0 5 G 43 46 89 033664 T 1 0 1 G 47 46 93 033687 C 1 0 1 G 47 46 93 034266 A 6 10 16 G 36 32 68 034418 T 1 0 1 C 41 42 83 034688 A 0 1 1 G 46 43 89 034727 - 1 0 1 + 45 44 89 034958 A 13 20 33 G 33 26 59 035714 G 5 0 5 A 37 46 83 035901 A 3 0 3 G 39 46 85 036132 G 3 0 3 A 45 46 91 036134 G 1 0 1 A 47 46 93 036140 G 1 0 1 A 47 46 93 036241 G 5 0 5 A 43 44 87 036412 T 1 0 1 C 47 42 89 036695 G 1 0 1 A 45 46 91 036900 T 12 20 32 C 34 26 60 037249 G 13 20 33 T 35 26 61 037401 G 4 0 4 C 44 46 90 038451 T 3 0 3 C 45 46 91 038491 + 1 0 1 - 47 46 93 038496 A 2 0 2 G 46 46 92 038600 T 0 2 2 C 46 44 90 038713 C 0 1 1 T 46 45 91 038879 A 1 0 1 G 47 46 93 038950 C 1 0 1 T 47 46 93 039720 T 2 1 3 A 46 45 91 039959 A 0 2 2 G 48 44 92 040091 C 0 1 1 T 48 45 93 040720 G 1 0 1 A 43 42 85 040829 C 0 3 3 A 44 39 83 041043 G 1 0 1 A 43 42 85 041132 A 3 0 3 G 41 42 83 041597 A 3 0 3 C 41 42 83 041937 G 1 0 1 A 43 44 87 042135 T 1 1 2 C 43 43 86 042353 A 12 27 39 G 30 17 47 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 002124: cttcccctccttccctagtta 002522: a 003685: ta 007024: aatt 007460: tataaa 011053: c 012489: CA 015767: aa 015921: tctttac 016198: tagtt 023059: t 025302: TTTCT 031357: TT 034727: AA 038491: ta Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 020710 T 3 0 3 A 5 0 5 C 40 46 86