Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 000955 -- 0 0 0 0 0 +- 0 0 0 1 1 ++ 8 15 21 20 64 0.000 0.000 0.000 0.012 0.004 001729 AA 23 21 22 22 88 AG 1 2 0 0 3 GG 0 0 0 0 0 0.011 0.048 0.000 0.000 0.026 001772 CC 24 23 21 22 90 CG 0 0 1 0 1 GG 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 004492 CC 0 0 0 0 0 CG 0 2 0 0 2 GG 23 21 21 24 89 0.000 0.048 0.000 0.000 0.011 004579 AA 22 23 21 24 90 AG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 004589 CC 22 23 20 24 89 CT 1 0 1 0 2 TT 0 0 0 0 0 0.011 0.000 0.012 0.000 0.011 005663 AA 0 0 0 0 0 AC 9 0 0 0 9 CC 15 21 19 23 78 1.278 0.000 0.000 0.000 0.259 005773 AA 0 0 0 0 0 AG 1 0 2 0 3 GG 23 18 17 23 81 0.011 0.000 0.059 0.000 0.028 013506 GG 0 0 0 0 0 GT 3 0 0 0 3 TT 19 23 22 23 87 0.118 0.000 0.000 0.000 0.026 013727 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 21 23 22 23 89 0.012 0.000 0.000 0.000 0.003 013740 CC 22 23 22 22 89 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 013741 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 22 23 21 23 89 0.000 0.000 0.012 0.000 0.003 013758 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 21 23 22 23 89 0.012 0.000 0.000 0.000 0.003 013865 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 23 23 22 23 91 0.011 0.000 0.000 0.000 0.003 013898 AA 23 23 21 24 91 AG 1 0 1 0 2 GG 0 0 0 0 0 0.011 0.000 0.012 0.000 0.011 014204 CC 2 0 5 0 7 CT 8 2 9 3 22 TT 13 20 8 21 62 0.221 0.050 0.609 0.107 5.163 014299 GG 14 20 8 21 63 GT 8 2 9 3 22 TT 2 0 5 0 7 0.296 0.050 0.609 0.107 5.310 014465 CC 23 21 12 22 78 CT 1 2 8 2 13 TT 0 0 2 0 2 0.011 0.048 0.153 0.045 2.333 014491 -- 23 23 20 24 90 +- 1 0 1 0 2 ++ 0 0 0 0 0 0.011 0.000 0.012 0.000 0.011 014630 AA 23 23 20 24 90 AG 1 0 1 0 2 GG 0 0 0 0 0 0.011 0.000 0.012 0.000 0.011 014660 CC 15 23 15 23 76 CT 9 0 6 1 16 TT 0 0 0 0 0 1.278 0.000 0.583 0.011 0.834 014719 CC 24 23 21 21 89 CG 0 0 0 3 3 GG 0 0 0 0 0 0.000 0.000 0.000 0.107 0.025 014726 CC 0 0 0 0 0 CT 9 0 6 1 16 TT 15 23 15 23 76 1.278 0.000 0.583 0.011 0.834 014796 CC 22 23 21 24 90 CT 2 0 0 0 2 TT 0 0 0 0 0 0.045 0.000 0.000 0.000 0.011 014858 CC 23 23 21 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 014920 AA 24 23 22 16 85 AG 0 0 0 8 8 GG 0 0 0 0 0 0.000 0.000 0.000 0.960 0.188 014990 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 23 23 22 24 92 0.011 0.000 0.000 0.000 0.003 015044 AA 0 0 0 0 0 AG 1 0 1 0 2 GG 23 22 21 24 90 0.011 0.000 0.012 0.000 0.011 015370 CC 7 21 11 22 61 CT 13 2 9 2 26 TT 4 0 2 0 6 0.243 0.048 0.007 0.045 1.826 015624 GG 23 23 22 24 92 GT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 016005 AA 0 0 0 0 0 AG 0 0 0 2 2 GG 24 23 22 22 91 0.000 0.000 0.000 0.045 0.011 016099 CC 0 0 0 0 0 CG 0 2 0 0 2 GG 24 21 22 24 91 0.000 0.048 0.000 0.000 0.011 016298 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 23 23 22 24 92 0.011 0.000 0.000 0.000 0.003 016397 CC 23 23 21 24 91 CT 1 0 1 0 2 TT 0 0 0 0 0 0.011 0.000 0.012 0.000 0.011 016529 CC 18 22 20 24 84 CG 5 0 0 0 5 GG 0 0 0 0 0 0.342 0.000 0.000 0.000 0.074 016647 CC 0 0 1 0 1 CT 8 2 10 2 22 TT 15 20 8 22 65 1.019 0.050 0.903 0.045 0.332 016687 CC 22 22 19 24 87 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 016705 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 23 22 19 23 87 0.000 0.000 0.000 0.011 0.003 016853 CC 1 0 3 0 4 CT 9 2 11 3 25 TT 13 20 5 21 59 0.130 0.050 0.555 0.107 0.402 017104 CC 23 22 21 24 90 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 017158 CC 22 22 22 24 90 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 017169 AA 22 22 22 24 90 AG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 017177 AA 0 0 0 0 0 AT 2 0 0 0 2 TT 21 22 22 24 89 0.048 0.000 0.000 0.000 0.011 017206 GG 12 20 6 21 59 GT 10 2 11 3 26 TT 1 0 5 0 6 0.374 0.050 0.000 0.107 1.664 017238 CC 22 22 22 24 90 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 017311 CC 24 23 21 22 90 CT 0 0 1 2 3 TT 0 0 0 0 0 0.000 0.000 0.012 0.045 0.025 017620 AA 23 23 22 23 91 AG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 017890 CC 19 23 18 23 83 CT 3 0 4 1 8 TT 0 0 0 0 0 0.118 0.000 0.220 0.011 0.192 018034 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 21 23 22 24 90 0.012 0.000 0.000 0.000 0.003 018148 CC 21 23 22 24 90 CT 1 0 0 0 1 TT 0 0 0 0 0 0.012 0.000 0.000 0.000 0.003 018155 AA 0 0 0 0 0 AG 1 0 1 0 2 GG 21 23 21 24 89 0.012 0.000 0.012 0.000 0.011 018314 CC 22 23 22 24 91 CT 2 0 0 0 2 TT 0 0 0 0 0 0.045 0.000 0.000 0.000 0.011 018452 CC 22 23 22 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 018514 CC 22 23 22 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 018635 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 22 23 22 24 91 0.011 0.000 0.000 0.000 0.003 018710 CC 14 21 6 23 64 CG 8 2 10 1 21 GG 1 0 6 0 7 0.011 0.048 0.182 0.011 6.174 018829 AA 1 0 6 0 7 AG 8 2 10 1 21 GG 15 21 6 23 65 0.003 0.048 0.182 0.011 6.332 019188 -- 8 21 6 23 58 +- 9 2 11 1 23 ++ 7 0 4 0 11 1.484 0.048 0.069 0.011 9.623 019372 CC 22 22 19 23 86 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 019425 -- 13 19 3 3 38 +- 10 4 11 9 34 ++ 0 0 5 11 16 1.775 0.209 0.555 0.277 2.718 019481 -- 0 0 0 0 0 +- 1 0 0 0 1 ++ 22 23 19 23 87 0.011 0.000 0.000 0.000 0.003 019545 AA 0 19 3 3 25 AC 9 4 10 9 32 CC 14 0 6 11 31 1.361 0.209 0.120 0.277 6.383 019661 CC 0 0 0 0 0 CG 0 0 1 0 1 GG 23 23 18 23 87 0.000 0.000 0.014 0.000 0.003 019723 AA 14 0 3 10 27 AC 8 12 14 10 44 CC 1 11 2 3 17 0.011 2.865 4.337 0.040 0.015 019725 CC 0 0 0 0 0 CT 4 0 0 0 4 TT 19 23 19 23 84 0.209 0.000 0.000 0.000 0.048 019802 CC 20 21 10 24 75 CT 4 1 11 0 16 TT 0 1 1 0 2 0.198 9.521 0.889 0.000 0.998 019821 CC 2 0 8 8 18 CG 10 6 10 13 39 GG 12 17 4 3 36 0.002 0.517 0.079 0.421 1.539 019840 CC 24 23 21 24 92 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 019869 CC 2 0 0 0 2 CT 17 0 3 0 20 TT 5 22 19 24 70 4.629 0.000 0.118 0.000 0.160 019881 CC 23 22 22 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 019908 CC 1 0 0 0 1 CG 14 1 5 0 20 GG 9 21 17 24 71 2.344 0.012 0.362 0.000 0.097 019966 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 22 22 22 24 90 0.045 0.000 0.000 0.000 0.011 019977 CC 16 2 8 15 41 CT 8 11 12 7 38 TT 0 9 2 2 13 0.960 0.279 0.702 0.730 0.738 019992 CC 0 0 0 0 0 CT 5 0 0 0 5 TT 19 22 22 24 87 0.324 0.000 0.000 0.000 0.072 020070 CC 24 22 22 23 91 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 020089 -- 0 0 0 0 0 +- 1 0 0 0 1 ++ 23 22 22 24 91 0.011 0.000 0.000 0.000 0.003 020123 CC 24 22 22 23 91 CG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 020180 AA 0 0 0 0 0 AG 0 0 0 1 1 GG 24 23 22 23 92 0.000 0.000 0.000 0.011 0.003 020338 AA 0 0 0 0 0 AC 0 0 3 0 3 CC 23 23 19 24 89 0.000 0.000 0.118 0.000 0.025 020360 CC 22 23 22 24 91 CG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 020519 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 22 23 22 24 91 0.011 0.000 0.000 0.000 0.003 020653 CC 22 23 22 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 020654 AA 7 0 3 7 17 AG 10 12 13 8 43 GG 6 11 6 9 32 0.381 2.865 0.917 2.593 0.145 020698 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 22 23 22 24 91 0.011 0.000 0.000 0.000 0.003 020702 AA 0 0 1 0 1 AG 1 4 10 0 15 GG 22 19 11 24 76 0.011 0.209 0.468 0.000 0.071 020770 CC 0 0 0 0 0 CG 2 0 0 0 2 GG 20 23 22 24 89 0.050 0.000 0.000 0.000 0.011 020778 AA 0 0 0 0 0 AG 6 0 0 0 6 GG 16 23 22 24 85 0.548 0.000 0.000 0.000 0.106 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000955: caaag 014491: a 019188: cgtgtg 019425: C 019481: GTT 020089: c