Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000079 C 16 2 18 A 22 40 62 000215 T 16 2 18 G 22 40 62 000229 G 31 2 33 A 7 40 47 000753 C 22 2 24 T 22 44 66 000934 C 0 1 1 T 46 45 91 001147 A 3 0 3 T 41 46 87 001478 G 18 2 20 A 20 38 58 002497 G 14 2 16 C 32 44 76 002873 T 1 0 1 G 39 42 81 003013 C 3 0 3 G 37 46 83 003104 T 1 0 1 C 37 46 83 003215 G 16 2 18 A 18 44 62 003576 G 0 1 1 C 44 45 89 003728 G 12 2 14 C 32 44 76 003772 C 19 2 21 T 25 44 69 004392 G 1 0 1 A 45 44 89 004401 C 2 35 37 G 44 9 53 004874 C 1 0 1 T 41 46 87 004990 A 1 0 1 C 45 46 91 005109 G 1 0 1 T 43 42 85 005571 T 18 2 20 C 22 44 66 005671 C 14 2 16 T 32 44 76 006150 T 2 0 2 C 36 46 82 007151 A 1 0 1 G 43 46 89 007208 C 7 0 7 G 39 46 85 007444 C 14 2 16 G 32 42 74 007818 A 3 0 3 C 39 42 81 008443 C 7 0 7 T 33 42 75 010281 A 2 0 2 C 40 42 82 010581 G 7 0 7 A 39 46 85 010640 G 4 0 4 A 42 46 88 014011 G 14 2 16 A 32 42 74 014136 G 1 0 1 T 45 44 89 014417 G 11 0 11 A 35 46 81 014471 G 1 0 1 A 45 46 91 014480 G 7 0 7 C 39 46 85 014555 C 1 0 1 T 45 46 91 014558 G 1 0 1 T 45 46 91 014643 T 4 0 4 C 40 46 86 014645 G 10 0 10 C 34 46 80 018145 G 3 0 3 A 43 44 87 018305 A 14 2 16 T 32 42 74 019194 A 8 0 8 G 38 46 84 019201 G 38 2 40 A 6 44 50 020496 T 1 0 1 C 41 38 79 020780 T 3 0 3 C 39 36 75 020781 A 0 1 1 G 42 35 77 020865 G 19 2 21 A 23 34 57 023335 A 3 0 3 C 41 46 87 023641 A 10 0 10 G 32 46 78 023755 G 12 2 14 A 30 44 74 024232 C 25 2 27 A 21 34 55 024373 A 0 2 2 G 46 44 90 024494 G 37 2 39 C 7 42 49 025078 C 14 1 15 A 32 43 75 025127 A 0 1 1 G 46 43 89 025826 C 0 7 7 T 46 37 83 026080 G 14 2 16 C 32 44 76 026199 G 2 36 38 C 42 10 52 026369 - 7 0 7 + 39 46 85 026392 A 4 0 4 G 42 46 88 027071 G 3 0 3 A 39 44 83 027104 G 25 2 27 T 17 42 59 027206 C 3 7 10 T 37 37 74 027730 C 14 2 16 T 32 44 76 027922 T 1 0 1 G 45 42 87 028417 T 11 2 13 C 29 44 73 028418 G 28 2 30 A 12 44 56 028446 C 6 0 6 G 34 46 80 028478 T 11 2 13 C 29 44 73 028486 G 17 2 19 A 23 44 67 028917 T 0 2 2 C 42 40 82 029030 A 12 2 14 G 30 42 72 029073 T 12 2 14 A 30 42 72 029428 T 16 2 18 A 22 40 62 029472 T 11 2 13 C 27 40 67 029537 G 5 0 5 A 33 42 75 030145 G 2 0 2 C 40 36 76 030721 C 39 2 41 T 7 44 51 031077 * 031548 G 12 1 13 A 32 39 71 031558 T 3 0 3 C 41 40 81 031642 A 12 1 13 C 32 39 71 031720 G 3 0 3 C 41 40 81 031745 A 12 1 13 G 32 39 71 031751 A 1 0 1 C 43 40 83 031791 G 12 1 13 T 32 39 71 031901 G 12 1 13 C 32 39 71 031906 T 6 0 6 C 38 40 78 032280 G 0 2 2 A 42 38 80 032437 T 1 0 1 A 41 40 81 033579 C 11 1 12 T 25 39 64 033676 C 0 1 1 T 36 39 75 033819 G 1 0 1 T 41 46 87 033898 A 0 1 1 G 46 45 91 034096 G 2 0 2 C 44 46 90 034360 G 6 0 6 A 38 46 84 034549 C 10 2 12 T 34 44 78 035434 A 14 2 16 G 32 44 76 035783 C 21 2 23 T 25 44 69 035979 A 39 2 41 G 7 44 51 036132 G 1 0 1 C 45 46 91 036314 G 14 2 16 A 32 44 76 036346 T 1 0 1 A 45 46 91 051030 T 14 2 16 C 34 44 78 051136 G 4 0 4 C 38 36 74 051633 C 0 1 1 T 46 45 91 051751 C 14 2 16 G 32 44 76 051896 C 1 0 1 A 45 46 91 052020 A 0 1 1 G 46 45 91 052507 G 0 1 1 A 42 39 81 052524 C 3 0 3 T 39 40 79 052624 - 1 0 1 + 43 44 87 052696 G 13 2 15 A 31 44 75 053045 - 0 1 1 + 42 41 83 056155 G 2 0 2 A 44 46 90 056563 A 3 0 3 G 43 46 89 056720 A 1 0 1 G 45 44 89 056863 - 3 0 3 + 43 44 87 057404 G 6 1 7 C 40 43 83 057452 A 11 0 11 G 35 44 79 057500 A 4 0 4 G 42 44 86 057600 T 14 1 15 C 32 43 75 058015 A 1 0 1 C 45 46 91 058027 G 1 0 1 A 45 46 91 058339 G 0 2 2 T 46 44 90 058346 G 1 0 1 T 45 46 91 058351 C 5 2 7 T 41 44 85 058702 G 1 0 1 A 45 46 91 058871 T 1 0 1 C 45 46 91 059589 G 1 0 1 A 45 46 91 059853 A 1 0 1 G 47 44 91 059886 C 3 0 3 A 45 44 89 060058 G 13 2 15 A 35 44 79 060073 A 1 0 1 C 47 46 93 060172 C 0 1 1 T 46 45 91 060389 G 24 2 26 A 22 44 66 061188 C 1 0 1 G 45 46 91 061283 T 1 0 1 C 45 44 89 061346 - 3 0 3 + 43 44 87 061427 G 3 0 3 A 43 46 89 062723 T 6 0 6 A 40 46 86 062739 T 1 0 1 C 45 46 91 062946 C 13 2 15 A 33 42 75 062994 T 1 0 1 G 45 44 89 063345 T 5 0 5 C 41 46 87 063496 G 1 0 1 T 45 46 91 063792 C 25 2 27 T 21 42 63 063869 A 1 0 1 G 45 44 89 064321 G 11 0 11 A 23 46 69 064410 G 6 2 8 C 28 44 72 064417 A 6 0 6 G 28 46 74 064540 G 23 2 25 A 11 44 55 064731 T 6 0 6 C 40 46 86 065784 - 1 0 1 + 45 46 91 065800 G 24 2 26 A 22 44 66 066113 A 11 0 11 G 35 46 81 066206 T 1 0 1 A 45 46 91 066510 A 1 0 1 C 45 46 91 066875 G 3 0 3 C 43 46 89 067002 G 1 0 1 A 45 46 91 067319 A 1 0 1 G 45 44 89 067894 C 3 0 3 T 39 44 83 068077 C 23 2 25 A 21 42 63 068294 T 0 1 1 G 46 45 91 068741 A 1 0 1 G 43 44 87 068917 A 6 0 6 G 40 46 86 068985 A 1 0 1 T 45 46 91 069235 C 1 0 1 T 45 46 91 069537 C 5 2 7 A 39 44 83 069625 G 25 2 27 A 21 44 65 069934 A 1 0 1 G 45 46 91 070219 A 0 2 2 G 46 42 88 070712 C 0 2 2 T 42 44 86 071349 G 24 2 26 T 22 44 66 071761 G 0 1 1 T 46 45 91 071805 A 1 0 1 G 45 46 91 071867 G 1 0 1 A 45 46 91 072140 C 1 0 1 T 45 46 91 072282 T 1 0 1 A 45 46 91 072301 A 11 0 11 G 35 46 81 072383 G 11 0 11 A 35 46 81 073456 G 1 0 1 A 41 44 85 073507 G 1 0 1 A 41 44 85 073703 G 0 1 1 A 46 45 91 073817 A 32 2 34 G 14 44 58 076208 A 7 0 7 G 39 44 83 076241 A 3 0 3 G 41 44 85 076426 G 2 0 2 T 32 34 66 076520 C 1 0 1 A 33 32 65 077024 T 7 0 7 C 37 46 83 077066 G 1 0 1 A 43 46 89 077747 C 1 0 1 T 43 40 83 077879 T 11 0 11 C 33 42 75 078078 T 0 1 1 C 46 43 89 078081 T 1 0 1 C 45 44 89 078256 T 1 0 1 C 45 44 89 078376 T 1 0 1 C 45 46 91 078684 A 5 0 5 T 41 46 87 078747 C 1 0 1 T 45 46 91 079005 T 24 2 26 C 20 44 64 079713 C 1 0 1 T 47 44 91 079886 T 3 0 3 C 45 44 89 080064 A 13 2 15 G 35 42 77 080203 C 0 1 1 G 48 43 91 080576 T 11 0 11 C 35 44 79 080690 T 1 0 1 C 45 44 89 081008 A 9 0 9 G 35 46 81 081122 G 1 0 1 C 47 46 93 081133 T 2 0 2 A 46 46 92 081136 A 1 2 3 T 47 44 91 081300 + 1 0 1 - 47 46 93 081457 C 6 0 6 T 36 46 82 081735 T 2 0 2 A 40 46 86 081844 - 1 0 1 + 45 46 91 081856 A 3 0 3 T 43 46 89 081908 T 1 0 1 G 45 46 91 082122 T 3 0 3 C 45 46 91 082290 G 1 0 1 C 37 42 79 082577 T 0 9 9 G 46 37 83 082947 T 25 2 27 G 15 44 59 083675 G 0 1 1 A 44 43 87 084045 A 21 2 23 G 23 42 65 094281 T 4 0 4 C 36 44 80 094297 T 0 2 2 C 40 42 82 095116 - 0 13 13 + 42 33 75 095297 C 39 3 42 T 7 43 50 095381 G 26 3 29 A 20 43 63 095414 - 1 0 1 + 45 46 91 095479 C 1 0 1 A 45 34 79 097962 G 11 0 11 A 37 46 83 099563 A 14 2 16 G 32 38 70 100546 C 1 0 1 T 43 46 89 100585 A 10 0 10 G 34 46 80 100635 T 1 0 1 C 43 46 89 101207 T 12 2 14 A 32 42 74 101266 C 2 0 2 T 42 44 86 102305 G 7 0 7 A 39 44 83 102534 C 3 0 3 T 45 46 91 102893 G 1 0 1 C 41 44 85 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 026369: c 052624: tgat 053045: g 056863: t 061346: at 065784: gtgtt 081300: ctaa 081844: tcaa 095116: tg 095414: C Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 031077 G 7 2 9 C 25 0 25 T 14 44 58