CXCR4 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

ATACTGATTC TGCCACTACC AGGCTTTGTG AAAAGCAAGT CATGAAAACG 50 CTCTGAAATT CTAGACCTTC AGTAGATAGG ATCTACCGTG TCTATAAAAA 100 TATGAAGATC CTTAAGTTTT ATTAAAGATT CGAAAAAAGT AAAAGTGTTT 150 | var(132):[A:0.01] TTACGGTTTT ATTTTCATTT TTATTTCTTA CCGTTATCGT TTATTATAAA 200 | REPEAT GGATATTATA AAGGATACAG ATGAAGAGAT ACGTAATGCA AGGCCTGTGA 250 GAAGGGGCGT GGAGCTTCCG AAACCTCTTC CAGCCACCAC CCTCCAAGAA 300 CCTGGAGTTT CTTTTTTTTT TTTTAATTCT ACAAATGTAA TATTAGAATT 350 | var(311):[T:0.01] GATTTTATCT GGCCATTAGT GTGTGTCCTA ACTCGTTCGT TTCTGAGAGT 400 CCCATCTCCC GGCCCGGATA TCATCTTTCC TGTGTCAGTG AAAGTGCAGA 450 GTAGATGAGA ACCTTTAACC ACCAACATTA GGGAGGGGTC CCAGACAAAG 500 GGGGAAAGTC ATGCTCTGTA GAGAAAAGGT TCCCTGCCTC CGAACTACCT 550 | var(517):[C:0.05] CTGGAACACT CCAGACTGAA ATGTTTCCTC TTTTGATATA GAAAAGAGGG 600 ATCGTGTGTA GAGTGCAGTC TGGGCAATCC CTCTCCTCGG GACCATTTCG 650 | var(602):[G:0.04] GGGTGGGGGC CTCTGGGGTC CGTGTCGCGA CGCACGCGCC TCGGTCCCAG 700 CTATCTCCGC AGCGGCCACC CCGCCTGCGG ACGCAGTTTC TCGGCCCCGC 750 | var(720):[G:0.04] CCCACACTCG CTCCCCCGCC CCACCCAGTC TCCGCGCCGG AGGGAAGTGG 800 CGCGAGGGGG AAAGCACTGT CTGCGCGCCC ACTGCAAACC TCAGCCAGTC 850 TGAGATCGCT TTAAACGTCT GACCCCCACC CCCACTCCGC CCCGCCCAGT 900 | var(877):[A:0.08] TCTTCAACCT AATTTCTGAT TCGTGCCAAA GCTTGTCCTC TGCTCAAAAT 950 CGTGGAAGAC GCCGAGTATG GGGACCGAAG ACCTGGGTTC AAGCCCGGCT 1000 | var(975):[A:0.01] TGGAATCCCT GCCCATCCCT GGCATTTCAT CTCTCCGGGC TTATTTGCTG 1050 GTTTCTCCGA ATGCGGGCCT TGTCTGGTTC ACGCTGGATC CCCAACGCCT 1100 | REPEAT AGAACAGTGC GTGGCACGCA GTTCGTCCTT CTATAAATAT CGGACTAAAT 1150 GCATCTCTGT GATGGTAATA CCCACACGGT GTTGTGAGAA TGAATGAGTG 1200 ATTCTGTGCA AGTTCCTAGT GATCTGTTAC AAAAAGTACT GGTCGCTAAA 1250 TTACTCTTAT AATAAAGCAT ACTTTTAGGA TAATAAAGCA CTATTCGCGA 1300 ATTGGTTACC GCTATTATGA AATTACTGAG CAATACATAT CTACATCTGA 1350 TCAGTCTCCA GAATTATGCC AAATCCTACC TTCTTCTGAA AGTATCTCCT 1400 AATTATCTGC ACCTGACCCT AGTGATGCTG TGAATGTGCA AGTATAGCTA 1450 CATCCTCCGA AGGAAGGATC TTTACTCCTT TTACCTCCTG AATGGGCTGC 1500 GTCTGCTGAA AGCGCGGGGA ATGGCGTTGG AAGCTTGGCC CTACTTCCAG 1550 | REPEAT CATTGCCGCC TACTGGTTGG GTTACTCCAG CAAGTCACTC CCCTTCCCTG 1600 GGCCTCAGTG TCTCTACTGT AGCATTCCCA GGTCTGGAAT TCCATCCACT 1650 TTAGCAAGGA TGGACGCGCC ACAGAGAGAC GCGTTCCTAG CCCGCGCTTC 1700 CCACCTGTCT TCAGGCGCAT CCCGCTTCCC TCAAACTTAG GAAATGCCTC 1750 TGGGAGGTCC TGTCCGGCTC CGGACTCACT ACCGACCACC CGCAAACAGC 1800 AGGGTCCCCT GGGCTTCCCA AGCCGCGCAC CTCTCCGCCC CGCCCCTGCG 1850 CCCTCCTTCC TCGCGTCTGC CCCTCTCCCC CACCCCGCCT TCTCCCTCCC 1900 | var(1891):[C:0.02] CGCCCCAGCG GCGCATGCGC CGCGCTCGGA GCGTGTTTTT ATAAAAGTCC 1950 GGCCGCGGCC AGAAACTTCA GTTTGTTGGC TGCGGCAGCA GGTAGCAAAG 2000 | var(1957):[A:0.01] | Exon 1 | UTR TGACGCCGAG GGCCTGAGTG CTCCAGTAGC CACCGCATCT GGAGAACCAG 2050 CGGTTACCAT GGAGGGGATC AGTGTAAGTC CAGTTTCAAC CTGCTTTGTC 2100 M E G I S 5 ATAAATGTAC AAACGTTTGA ACTTAGAGCG CAGCCCCTCT CCGAGCGGGC 2150 AGAAGCGGCC AGGACATTGG AGGTACCCGT ACTCCAAAAA AGGGTCACCG 2200 AAAGGAGTTT TCTTGACCAT GCCTATATAG TGCGGGTGGG TGGGGGGGGA 2250 GCAGGATTGG AATCTTTTTC TCTGTGAGTC GAGGAGAAAC GACTGGAAAG 2300 AGCGTTCCAG TGGCTGCATG TGTCTCCCCC TTGAGTCCCG CCGCGCGCGG 2350 CGGCTTGCAC GCTGTTTGCA AACGTAAGAA CATTCTGTGC ACAAGTGCAG 2400 | var(2369):[T:0.01] AGAAGGCGTG CGCGCTGCCT CGGGACTCAG ACCACCGGTC TCTTCCTTGG 2450 GGAAGCGGGG ATGTCTTGGA GCGAGTTACA TTGTCTGAAT TTAGAGGCGG 2500 AGGGCGGCGT GCCTGGGCTG AGTTCCCAGG AGGAGATTGC GCCCGCTTTA 2550 ACTTCGGGGT TAAGCGCCTG GTGACTGTTC TTGACACTGG GTGCGTGTTT 2600 | var(2594):[T:0.01] GTTAAACTCT GTGCGGCCGA CGGAGCTGTG CCAGTCTCCC AGCACAGTAG 2650 GCAGAGGGCG GGAGAGGCGG GTGGACCCAC CGCGCCGATC CTCTGAGGGG 2700 ATCGAGTGGT GGCAGCAGCT AGGAGTTGAT CCGCCCGCGC GCTTTGGGTT 2750 TGAGGGGGAA ACCTTCCCGC CGTCCGAAGC GCGCCTCTTC CCCACGGCCG 2800 | var(2782):[T:0.12] CGAGTGGGTC CTGCAGTTCG AGAGTTTGGG GTCGTGCAGA GGTCAGCGGA 2850 GTGGTTTGAC CTCCCCTTTG ACACCGCGCA GCTGCCAGCC CTGAGATTTG 2900 CGCTCCGGGG ATAGGAGCGG GTACGGGGTG AGGGGCGGGG GCGGTTAAGA 2950 CCGCACCTGG GCTGCCAGGT CGCCGCCGCG AAGACTGGCA GGTGCAAGTG 3000 | var(2996):[C:0.04] GGGAAACCGT TTGGCTCTCT CCGAGTCCAG TTGTGATGTT TAACCGTCGG 3050 TGGTTTCCAG AAACCTTTTG AAACCCTCTT GCTAGGGAGT TTTTGGTTTC 3100 CTGCAGCGGC GCGCAATTCA AAGACGCTCG CGGCGGAGCC GCCCAGTCGC 3150 TCCCCAGCAC CCTGTGGGAC AGAGCCTGGC GTGTCGCCCA GCGGAGCCCC 3200 TGCAGCGCTG CTTGCGGGCG GTTGGCGTGG GTGTAGTGGG CAGCCGCGGC 3250 GGCCCGGGGC TGGACGACCC GGCCCCCCGC GTGCCCACCG CCTGGAGGCT 3300 TCCAGCTGCC CACCTCCGGC CGGGTTAACT GGATCAGTGG CGGGGTAATG 3350 GGAAGCCACC CGGGAGAGTG AGGAAATGAA ACTTGGGGCG AGGACCACGG 3400 GTGCAGACCC CGTTACCTTC TCCACCCAGG AAAATGCCCC GCTCCCTAAC 3450 GTCCCAAACG CGCCAAGTGA TAAACACGAG GATGGCAAGA GACCCACACA 3500 CCGGAGGAGC GCCCGCTTGG GGGAGGAGGT GCCGTTTGTT CATTTTCTGA 3550 CACTCCCGCC CAATATACCC CAAGCACCGA AGGGCCTTCG TTTTAAGACC 3600 | var(3570):[T:0.08] GCATTCTCTT TACCCACTAC AAGTTGCTTG AAGCCCAGAA TGGTTTGTAT 3650 TTAGGCAGGC GTGGGAAAAT TAAGTTTTTG CGCTTTAGGA GAATGAGTCT 3700 | var(3684):[C:0.38] TTGCAACGCC CCCGCCCTCC CCCCGTGATC CTCCCTTCTC CCCTCTTCCC 3750 TCCCTGGGCG AAAAACTTCT TACAAAAAGT TAATCACTGC CCCTCCTAGC 3800 AGCACCCACC CCACCCCCCA CGCCGCCTGG GAGTGGCCTC TTTGTGTGTA 3850 TTTTTTTTTT CCTCCTAAGG AAGGTTTTTT TTCTTCCCTC TAGTGGGCGG 3900 GGCAGAGGAG TTAGCCAAGA TGTGACTTTG AAACCCTCAG CGTCTCAGTG 3950 CCCTTTTGTT CTAAACAAAG AATTTTGTAA TTGGTTCTAC CAAAGAAGGA 4000 TATAATGAAG TCACTATGGG AAAAGATGGG GAGGAGAGTT GTAGGATTCT 4050 ACATTAATTC TCTTGTGCCC TTAGCCCACT ACTTCAGAAT TTCCTGAAGA 4100 AAGCAAGCCT GAATTGGTTT TTTAAATTGC TTTAAAAATT TTTTTTAACT 4150 | var(4139):[A:0.35] GGGTTAATGC TTGCTGAATT GGAAGTGAAT GTCCATTCCT TTGCCTCTTT 4200 TGCAGATATA CACTTCAGAT AACTACACCG AGGAAATGGG CTCAGGGGAC 4250 | Exon 2 I Y T S D N Y T E E M G S G D 20 TATGACTCCA TGAAGGAACC CTGTTTCCGT GAAGAAAATG CTAATTTCAA 4300 Y D S M K E P C F R E E N A N F N 37 TAAAATCTTC CTGCCCACCA TCTACTCCAT CATCTTCTTA ACTGGCATTG 4350 K I F L P T I Y S I I F L T G I 53 TGGGCAATGG ATTGGTCATC CTGGTCATGG GTTACCAGAA GAAACTGAGA 4400 V G N G L V I L V M G Y Q K K L R 70 AGCATGACGG ACAAGTACAG GCTGCACCTG TCAGTGGCCG ACCTCCTCTT 4450 S M T D K Y R L H L S V A D L L F 87 TGTCATCACG CTTCCCTTCT GGGCAGTTGA TGCCGTGGCA AACTGGTACT 4500 V I T L P F W A V D A V A N W Y 103 TTGGGAACTT CCTATGCAAG GCAGTCCATG TCATCTACAC AGTCAACCTC 4550 F G N F L C K A V H V I Y T V N L 120 TACAGCAGTG TCCTCATCCT GGCCTTCATC AGTCTGGACC GCTACCTGGC 4600 Y S S V L I L A F I S L D R Y L A 137 CATCGTCCAC GCCACCAACA GTCAGAGGCC AAGGAAGCTG TTGGCTGAAA 4650 | var(4604):[T:0.02] I V H A T N S Q R P R K L L A E 153 AGGTGGTCTA TGTTGGCGTC TGGATCCCTG CCCTCCTGCT GACTATTCCC 4700 K V V Y V G V W I P A L L L T I P 170 GACTTCATCT TTGCCAACGT CAGTGAGGCA GATGACAGAT ATATCTGTGA 4750 D F I F A N V S E A D D R Y I C D 187 CCGCTTCTAC CCCAATGACT TGTGGGTGGT TGTGTTCCAG TTTCAGCACA 4800 R F Y P N D L W V V V F Q F Q H 203 TCATGGTTGG CCTTATCCTG CCTGGTATTG TCATCCTGTC CTGCTATTGC 4850 I M V G L I L P G I V I L S C Y C 220 ATTATCATCT CCAAGCTGTC ACACTCCAAG GGCCACCAGA AGCGCAAGGC 4900 I I I S K L S H S K G H Q K R K A 237 CCTCAAGACC ACAGTCATCC TCATCCTGGC TTTCTTCGCC TGTTGGCTGC 4950 L K T T V I L I L A F F A C W L 253 CTTACTACAT TGGGATCAGC ATCGACTCCT TCATCCTCCT GGAAATCATC 5000 P Y Y I G I S I D S F I L L E I I 270 AAGCAAGGGT GTGAGTTTGA GAACACTGTG CACAAGTGGA TTTCCATCAC 5050 K Q G C E F E N T V H K W I S I T 287 CGAGGCCCTA GCTTTCTTCC ACTGTTGTCT GAACCCCATC CTCTATGCTT 5100 E A L A F F H C C L N P I L Y A 303 TCCTTGGAGC CAAATTTAAA ACCTCTGCCC AGCACGCACT CACCTCTGTG 5150 F L G A K F K T S A Q H A L T S V 320 AGCAGAGGGT CCAGCCTCAA GATCCTCTCC AAAGGAAAGC GAGGTGGACA 5200 S R G S S L K I L S K G K R G G H 337 TTCATCTGTT TCCACTGAGT CTGAGTCTTC AAGTTTTCAC TCCAGCTAAC 5250 | UTR S S V S T E S E S S S F H S S 352 ACAGATGTAA AAGACTTTTT TTTATACGAT AAATAACTTT TTTTTAAGTT 5300 | var(5278):[A:0.02] ACACATTTTT CAGATATAAA AGACTGACCA ATATTGTACA GTTTTTATTG 5350 CTTGTTGGAT TTTTGTCTTG TGTTTCTTTA GTTTTTGTGA AGTTTAATTG 5400 ACTTATTTAT ATAAATTTTT TTTGTTTCAT ATTGATGTGT GTCTAGGCAG 5450 GACCTGTGGC CAAGTTCTTA GTTGCTGTAT GTCTCGTGGT AGGACTGTAG 5500 AAAAGGGAAC TGAACATTCC AGAGCGTGTA GTGAATCACG TAAAGCTAGA 5550 AATGATCCCC AGCTGTTTAT GCATAGATAA TCTCTCCATT CCCGTGGAAC 5600 GTTTTTCCTG TTCTTAAGAC GTGATTTTGC TGTAGAAGAT GGCACTTATA 5650 ACCAAAGCCC AAAGTGGTAT AGAAATGCTG GTTTTTCAGT TTTCAGGAGT 5700 | var(5679):[A:0.01] GGGTTGATTT CAGCACCTAC AGTGTACAGT CTTGTATTAA GTTGTTAATA 5750 AAAGTACATG TTAAACTTAC TTAGTGTTAT GTTCTGATTT CTGTTGACAT 5800 TCTTTTGGCT AGTAGAAGAC AAAAGTAATA CATTTATGGT ATGCAAAGCA 5850 | REPEAT | var(5837):[C:0.01] CTATCCTAGG TATTTCATTG TAATATTTTA CTTACCCCTT ATCACAACTC 5900 TGATAGATTC TGCTTCTGTT ACTAATTACA TTTTATAGAA GAGGAAACGG 5950 AGGCACAGAA AGCCTAAGTA ACTTGGTTAA AGGCATGTAG TAAGTATCAA 6000 ATCCTGTATT TTAAACCAGG TAACATGACT TAACGAATCT GAAGCCTTCA 6050 CCACTTTAAA TTCAAATGGA AGTTTAGAAA TGGCCAGCCA GCACCTATTT 6100 GTATGAAAGG TCATCTTTCA GAGGATAAGC ATGTATAAAG AAGAAAAGGT 6150 ATGCAGTCGT GTTTGGATTT TACTCCACCA TCCACTTGTG AAACCCAGGT 6200 CTGTGCAATG CCAGACGGTG TGTGCTTTCC TCATCCAGTA TCCTCAGTGT 6250 AGATAACCAT CACTCCCTTT TCACAGACAA GAGAACTGAG ATTCAGAGAC 6300 TTTCCATACA TTGCACTTTC AAGGGGGCAA AGCCAAGAAC TAATTCTGTT 6350 TATTGTTCCA GCTCTTGCTC TTAACTCTTA CCTACTATTG CCCTTCAGAA 6400 CACCTGGGCA TAAGTCAACT GAACTGCTAA TAAAGAAAGC CAAAAGTGAA 6450 TGTTTTCTTC ATAAAATTAA CCATGACCAA AATACTCCTC TTGTAATATC 6500 | var(6474):[C:0.03] TTCTATGCAA ATCTCAACAC TTTTATTCTT AAACTATCGC AACACCTAGC 6550 ACCTCCTCAA GGACTCAGCC AAGCAGCTAC AAGTTAATAC TGATATTTGT 6600 TAGAGTCAGA AGGAAGGTCC ACTGAAGCAA GCTCCCTGTT GCTCACATTT 6650 TGCACAAGAT TTTGGAGACT TATGTAACCA CCCGTTGCTA TTAACACGAC 6700 CATTGTGCAA GCCCCAGGCT CTTGAGTAAA TTTCAGCTTT GGTTTCTATT 6750 TAAAGATAAT TTCTAAACTC TAGCCATACC TACCTCACAT TGGAACACAA 6800 ACAGGGTACA CTCCAGGCAT GCACTCAGAT AATAAGTAGG ATATAATTAC 6850 GACAATATTT GGTCTACTTT TAGTAATTGT TTCTGGCACA GAAAATCCAT 6900 TTTGGAGGAA AAATTGCAAT GCCTTATCTT TCTGAGGCAA ATCACATTTG 6950 TTCAAGGCAA ATTATAGATC CTGTGAAGGG AAATAACTTA ATTACTTAAA 7000 ATAGAATCCA ATTTGGCTGT ACATTTTTGC TGCCGTCTAT GGATCTGGGG 7050 TAATTCAAAG TGGTATTCAT ATTCTACTTG AGGACACAAT TAGATTTCAG 7100 ATAGGAAATT ATCTTGAGGT TTCTTGGTTT TCCCTGAGAA GCCTAATTGG 7150 | var(7112):[C:0.01] ATCACCCTTC ATTTAAGCAT AGTTTTACAT GCACTCTCTC AAAGGCTTAG 7200 TCTTAAAGCC ACAACCATTG AGACAGACTT CACTTGAACC CTCTCTATAA 7250 ATATTTATTC TCCGGGAGAC AATAGAAGAA ATCCTTGGAA GGCATGCTTT 7300 TTCTTTCTCA TCTTGGCTTG AAACCTCCTT ACCCCAGATT CCTCTCCTTT 7350 ACCGTGGAGT CACAACAAAA GGAACTGAGC CAAAACAAAA TTCCCAGTGT 7400 CACCAGTCTT AATGGATATT TCATTCTCCC TTGGAACAAA GATGGAATAG 7450 CTTTTTTTCC AAAAGAAAAA CAAGCCTTGG CTCTCTCCCT GCCCCAAAAG 7500 GGTGCCCCCC ACCCCCATCA TTCTCTGTCC CAACCCTGCC ATGTTAGAGC 7550 GTCTCCAAAG CCTTCCCTGT GTCGTGGTTT GTCTGACAAT GTGGGGAAAC 7600 CCAGTCTGCT GGCCAGCCCT TGCATGAAGT AGCTGATTGT TCCCTCTCCT 7650 CATCCCTTAT GAATGGGGCC CTTGAAGTTC AGTCATGTAG ATTCAGTTGT 7700 ATAATGAAAG CTAAAATATT TAAATTGTAT GCATGCTGCC AATAACAGCA 7750 TACATCT