CSF3 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

AACCCACCCT CAAGGCCAGG TGCAGTGGCT CATGCCTATA ATCCCAGCAC 50 | REPEAT | var(28):[A:0.43] TTTGGGAGGC CGAGGCGGGT GGATCACCTG AGGTCAGGAG TTCGAGACCA 100 GCCTGACCAC CAACATGGTG AAATCCCACC TCTACTAAAA ATACAAAATT 150 AGATGAGCAT GGTGGTGCAT GCCTGTAATC CCACCTACTT GGGAGGCTGA 200 GGCAGGAAAA TCACTAGAAC CAGGGAGGCG GAGGTTGTAG TGAGCCGAGA 250 TCGTGCCATT GCACTCCAGC CTGAGCAATG AGCGAAACTC CATCTCAAAA 300 AAACAACAAC AAAAACCCAC CCTCTACTCC CAGGGAGCTG GGTACAGAGC 350 | var(321):[T:0.26] TGGGCCACAT CAGTGCAAGG TGCTGAGCCA CAGAACTCAG GCGGAGCTGC 400 | var(379):[T:0.04] AGGACCGCGG ACCAGATAAC AGTGTGTGAG ATCAGTGTGT GAGATCAGAC 450 GTCCCTGCCA TTGGTGACCA CCAGGGGGCC CCCAAGCACC AGAGATGGCC 500 CCATCCAGTC ACCACATCCA CTTCTCATCC AGAGATGTCT GTTTCTTGGC 550 ACGCTGGGGT AAATTAGGAC AGAAGGTGAC AGTCTTGGGT GTGGTCAGTC 600 AGACTGCCCT TATTCTGCCT TGTGGCCTGT AGAAAACGTT CAGGCCTAGG 650 | REPEAT CCGGGCACGG TGCTCACGCC TGTAATCCCA GCACTTTGGG AGGCCGAGGC 700 GGGTGGATCA CGAGGTCAGG AGATCGTGAC CATCCTGGCT AACACGGTGA 750 AACCCCGTCT CTACTAAAAA TACAAAAAAT TGGCCGGGCA TGGTGGCGGG 800 | var(789):[T:0.06] CACCTGTAGT TCCAGCTACT CGGGAGGCTG AGGCAGGAGA ATGGCGTGAA 850 CCCGAGAGGC AGAGTTTGCA GTGAGCCGAG ATCGCGCCAC TGCACTCCAG 900 CCTGGGCGAC AGAGCAAGAC TCCATCTGGA AAAGAAAAAG AAAACGTTCA 950 GGTCTGAGCC AGAGGCCCAG GCTGTAATTC TGTCACTTAC CATGACCTTG 1000 | REPEAT GGCAAGGCAC TTCCTTCCCT GGCCCAGTTC ACGGGGTTGG AATCGACTCC 1050 AAGGTCCCTT CCAGCATTAA CGCTGCATGG TTCTAAGATG AGAAGATGGG 1100 GCAGTTTCCC CTCTCTCACC CCAGCCCGTG TCCACTTCAA GGTGAATGAC 1150 CAGGGAAGTC ACGTGTCCCA ATCCCGCAGT TCCAAAGCCC TTGGGGACCC 1200 | var(1158):[A:0.18] TACTGTCAGG GTCGTGCACG AGGAGGTGAA GGTCAGGTGA GCCAATCGCC 1250 TCGAAGGGTC TTGCCTCATT CGGGACAGAC ATCCGGTTTC CTCTGGCTCT 1300 ACCGGGATTC TAGGGGCTTT AGCCGAATGA GTCATGGGGG GCGGGGGGGT 1350 TTCTGGGGGA GTTCCCAGCT AATCAACTTG GGACAGGACA GCCTGGAACT 1400 TTCGATGGTG CCTATCCAAG TGTGGGGTGG GCACAGCAGC CAAGACCCAA 1450 TGTCCTTATC TCAGGTAGGG GCTCAGGAGG TCTCCCAGAC AGGCAGCCTC 1500 CGGAGAGTTT GGGGGTAGGA ATGGGAGCAA CCAGCTTCTT TTTTTCTCTC 1550 TTAGAATTTG GGGGCTTGGG GGACAGGCTT GAGAATCCCA AAGGAGAGGG 1600 | var(1577):[T:0.01] GCAAAGGACA CTGCCCCCGC AAGTCTGCCA GAGCAGAGAG GGAGACCCCG 1650 | var(1607):[C:0.17] | var(1619):[A:0.01] ACTCAGCTGC CACTTCCCCA CAGGCTGCTG CCGCTTCCAG GCGTCTATCA 1700 GCGGCTCAGC CTTTGTTCAG CTGTTCTGTT CAAACACTCT GGGGCCATTC 1750 AGGCTGGGTG GGGCAGCGGG AGGAAGGGAG TTTGAGGGGG GCAAGGCGAC 1800 GTCAAAGGAG GATCAGAGAT TCCACAATTT CACAAAACTT TCGCAAACAG 1850 CTTTTTGTTC CAACCCCCCT GCATTGTCTT GGACACCAAA TTTGCATAAA 1900 TCCTGGGAAG TTATTACTAA GCCTTAGTCG TGGCCCCAGG TAATTTCCTC 1950 CCAGGCCTCC ATGGGGTTAT GTATAAAGGC CCCCCTAGAG CTGGGCCCCA 2000 | var(1980):[G:0.49] AAACAGCCCG GAGCCTGCAG CCCAGCCCCA CCCAGACCCA TGGCTGGACC 2050 | Exon 1 | UTR | var(2024):[G:0.02] M A G P 4 TGCCACCCAG AGCCCCATGA AGCTGATGGG TGAGTGTCTT GGCCCAGGAT 2100 A T Q S P M K L M 13 GGGAGAGCCG CCTGCCCTGG CATGGGAGGG AGGCTGGTGT GACAGAGGGG 2150 CTGGGGATCC CCGTTCTGGG AATGGGGATT AAAGGCACCC AGTGTCCCCG 2200 AGAGGGCCTC AGGTGGTAGG GAACAGCATG TCTCCTGAGC CCGCTCTGTC 2250 CCCAGCCCTG CAGCTGCTGC TGTGGCACAG TGCACTCTGG ACAGTGCAGG 2300 | Exon 2 A L Q L L L W H S A L W T V Q 28 AAGCCACCCC CCTGGGCCCT GCCAGCTCCC TGCCCCAGAG CTTCCTGCTC 2350 E A T P L G P A S S L P Q S F L L 45 AAGTGCTTAG AGCAAGTGAG GAAGATCCAG GGCGATGGCG CAGCGCTCCA 2400 K C L E Q V R K I Q G D G A A L Q 62 GGAGAAGCTG GTGAGTGAGG TGGGTGAGAG GGCTGTGGAG GGAAGCCCGG 2450 E K L V S E 68 TGGGGAGAGC TAAGGGGGAT GGAACTGCAG GGCCAACATC CTCTGGAAGG 2500 GACATGGGAG AATATTAGGA GCAGTGGAGC TGGGGAAGGC TGGGAAGGGA 2550 | var(2504):[G:0.07] CTTGGGGAGG AGGACCTTGG TGGGGACAGT GCTCGGGAGG GCTGGCTGGG 2600 | var(2584):[T:0.08] | var(2589):[C:0.01] ATGGGAGTGG AGGCATCACA TTCAGGAGAA AGGGCAAGGG CCCCTGTGAG 2650 | var(2617):[T:0.05] ATCAGAGAGT GGGGGTGCAG GGCAGAGAGG AACTGAACAG CCTGGCAGGA 2700 CATGGAGGGA GGGGAAAGAC CAGAGAGTCG GGGAGGACCC GGGAAGGAGC 2750 | var(2725):[C:0.01] GGCGACCCGG CCACGGCGAG TCTCACTCAG CATCCTTCCA TCCCCAGTGT 2800 | var(2754):[A:0.01] | var(2764):[T:0.03] | Exon 3 C 69 GCCACCTACA AGCTGTGCCA CCCCGAGGAG CTGGTGCTGC TCGGACACTC 2850 A T Y K L C H P E E L V L L G H S 86 TCTGGGCATC CCCTGGGCTC CCCTGAGCAG CTGCCCCAGC CAGGCCCTGC 2900 L G I P W A P L S S C P S Q A L 102 AGCTGGTGAG TGTCAGGAAA GGATAAGGCT AATGAGGAGG GGGAAGGAGA 2950 Q L 104 GGAGGAACAC CCATGGGCTC CCCCATGTCT CCAGGTTCCA AGCTGGGGGC 3000 CTGACGTATC TCAGGCAGCA CCCCCTAACT CTTCCGCTCT GTCTCACAGG 3050 | Exon 4 104 CAGGCTGCTT GAGCCAACTC CATAGCGGCC TTTTCCTCTA CCAGGGGCTC 3100 A G C L S Q L H S G L F L Y Q G L 121 CTGCAGGCCC TGGAAGGGAT CTCCCCCGAG TTGGGTCCCA CCTTGGACAC 3150 L Q A L E G I S P E L G P T L D T 138 ACTGCAGCTG GACGTCGCCG ACTTTGCCAC CACCATCTGG CAGCAGGTGA 3200 L Q L D V A D F A T T I W Q Q 153 GCCTTGTTGG GCAGGGTGGC CAAGGTCGTG CTGGCATTCT GGGCACCACA 3250 GCCGGGCCTG TGTATGGGCC CTGTCCATGC TGTCAGCCCC CAGCATTTCC 3300 | var(3254):[A:0.03] TCATTTGTAA TAACGCCCAC TCAGAAGGGC CCAACCACTG ATCACAGCTT 3350 TCCCCCACAG ATGGAAGAAC TGGGAATGGC CCCTGCCCTG CAGCCCACCC 3400 | Exon 5 | var(3370):[A:0.03] M E E L G M A P A L Q P T 166 AGGGTGCCAT GCCGGCCTTC GCCTCTGCTT TCCAGCGCCG GGCAGGAGGG 3450 | var(3421):[A:0.02] Q G A M P A F A S A F Q R R A G G 183 GTCCTGGTTG CCTCCCATCT GCAGAGCTTC CTGGAGGTGT CGTACCGCGT 3500 | var(3456):[A:0.16] V L V A S H L Q S F L E V S Y R V 200 TCTACGCCAC CTTGCCCAGC CCTGAGCCAA GCCCTCCCCA TCCCATGTAT 3550 | UTR L R H L A Q P 207 TTATCTCTAT TTAATATTTA TGTCTATTTA AGCCTCATAT TTAAAGACAG 3600 GGAAGAGCAG AACGGAGCCC CAGGCCTCTG TGTCCTTCCC TGCATTTCTG 3650 AGTTTCATTC TCCTGCCTGT AGCAGTGAGA AAAAGCTCCT GTCCTCCCAT 3700 | var(3666):[T:0.03] CCCCTGGACT GGGAGGTAGA TAGGTAAATA CCAAGTATTT ATTACTATGA 3750 CTGCTCCCCA GCCCTGGCTC TGCAATGGGC ACTGGGATGA GCCGCTGTGA 3800 GCCCCTGGTC CTGAGGGTCC CCACCTGGGA CCCTTGAGAG TATCAGGTCT 3850 CCCACGTGGG AGACAAGAAA TCCCTGTTTA ATATTTAAAC AGCAGTGTTC 3900 CCCATCTGGG TCCTTGCACC CCTCACTCTG GCCTCAGCCG ACTGCACAGC 3950 GGCCCCTGCA TCCCCTTGGC TGTGAGGCCC CTGGACAAGC AGAGGTGGCC 4000 AGAGCTGGGA GGCATGGCCC TGGGGTCCCA CGAATTTGCT GGGGAATCTC 4050 | var(4050):[T:0.23] GTTTTTCTTC TTAAGACTTT TGGGACATGG TTTGACTCCC GAACATCACC 4100 GACGTGTCTC CTGTTTTTCT GGGTGGCCTC GGGACACCTG CCCTGCCCCC 4150 | var(4105):[C:0.03] | var(4145):[A:0.01] ACGAGGGTCA GGACTGTGAC TCTTTTTAGG GCCAGGCAGG TGCCTGGACA 4200 TTTGCCTTGC TGGACGGGGA CTGGGGATGT GGGAGGGAGC AGACAGGAGG 4250 | var(4215):[T:0.47] AATCATGTCA GGCCTGTGTG TGAAAGGAAG CTCCACTGTC ACCCTCCACC 4300 TCTTCACCCC CCACTCACCA GTGTCCCCTC CACTGTCACA TTGTAACTGA 4350 ACTTCAGGAT AATAAAGTGT TTGCCTCCAG TCACGTCCTT CCTCCTTCTT 4400 GAGTCCAGCT GGTGCCTGGC CAGGGGCTGG GGAGGTGGCT GAAGGGTGGG 4450 AGAGGCCAGA GGGAGGTCGG GGAGGAGGTC TGGGGAGGAG GTCCAGGGAG 4500 | var(4480):[G:0.16] GAGGAGGAAA GTTCTCAAGT TCGTCTGACA TTCATTCCGT TAGCACATAT 4550 | var(4522):[T:0.02] | REPEAT TTATCTGAGC ACCTACTCTG TGCAGACGCT GGGCTAAGTG CTGGGGACAC 4600 AGCAGGGAAC AAGGCAGACA TGGAATCTGC ACTCGAGCAG CCAAAGCCTG 4650 GCAGGGAAGA CAGAGGCACA GGGACCATGG GAACCCGGAA AGGAGAGGGC 4700 ATGGGGTCTG GGTGGGCTTA ACAGGCCAGA CACAGCCAGA CAAGATGAAG 4750 CCAGGGAGTG CTGAGCATCT GCACCAGGCT TGTCATTTAC CATCTTCCAT 4800 AAACTTGAGC CCATCCATCA AGTTGCCCAC AAAGTGGAAG CCAAGTTCAA 4850 GGTGACCACT GGGGTCAGAG CTTCTCTCCT CAGACTCGGT CTCTGCACTC 4900 GCCCCAGCTG GTCACTTCCT GCTTGTGGCA GCCTTGGGCT GAAGAGCGCT 4950 AAGCTCACAG CCCAGGAGGG TGGGGAGCTG TGGCAAGCAG GGGGGGCAGC 5000 | var(4993):[T:0.02] GACCGCACCA CAGGTGTGAG GCCTGCCTGC AGCCAAAGAC TCCTGTGTGG 5050 CTTTGGGGTA CCCCCACCAG TCCCCAGTCC ACTATCTGCC CAAACCTTCT 5100 CCTCCTCAGC TCCTCAGTCC CTCCCACCTC CCCTGCCCGT GGCTCCTCGG 5150 AAAGCAGGGT CAGAAGTTCC CACTGCCAGC TCGGAGTCAT CCATCTAGGG 5200 | var(5168):[G:0.47] GCTCAGAGAT GTGTGAGGCA GGCAAGGAAG GGTTAAAGAA AGGTCCGGCC 5250 CCTCATCCCC CCGCCTCCCA TCCCCCAGTC CTTTTTTGGA GGCAACAGAT 5300 CAAATCCCAG GCTAGTCAGA GTGTGGGTGG TGTTGGACCA GGTTCGGGAG 5350 ACAGCAGAGC AGGCCACCCT GCCCCAGCAC TGTGGGGCCC TGAGCCAAAG 5400 CCTCTCCCCT TTCAGGGTAC AGCTGGCTTT GGGGGAGGGG GCAGCAGGCC 5450 AGCCAACTTG GCTCCAAGGA AGGGAAGCTG CTTTCCCCTG GCCCTTCCCC 5500 AGCTGAGCAA GCCCACATAG GACCCTG