LOCUS AF388025 5527 bp DNA linear PRI 14-JUN-2001 DEFINITION Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3) gene, complete cds. ACCESSION AF388025 VERSION AF388025.1 GI:14423572 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5527) AUTHORS Rieder,M.J., Carrington,D.P., Chung,M.-W., Lee,K.L., Poel,C.L., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (05-JUN-2001) Molecular Biotechnology, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: SeattleSNPs. NHLBI Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.mbt.washington.edu). FEATURES Location/Qualifiers source 1..5527 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" repeat_region 14..315 /rpt_family="AluSx" /rpt_type=dispersed variation 28 /frequency="0.43" /replace="A" variation 321 /frequency="0.26" /replace="T" variation 379 /frequency="0.04" /replace="T" repeat_region 649..944 /rpt_family="AluY" /rpt_type=dispersed variation 789 /frequency="0.06" /replace="T" repeat_region 956..1089 /rpt_family="MIR3" /rpt_type=dispersed variation 1158 /frequency="0.18" /replace="A" variation 1577 /frequency="0.01" /replace="T" variation 1607 /frequency="0.17" /replace="C" variation 1619 /frequency="0.01" /replace="A" variation 1980 /frequency="0.49" /replace="G" gene 2005..4378 /gene="CSF3" mRNA join(2005..2079,2256..2419,2798..2905,3050..3196, 3361..4378) /gene="CSF3" /product="colony stimulating factor 3 (granulocyte)" variation 2024 /gene="CSF3" /frequency="0.02" /replace="G" CDS join(2040..2079,2256..2419,2798..2905,3050..3196, 3361..3525) /gene="CSF3" /codon_start=1 /product="colony stimulating factor 3 (granulocyte)" /protein_id="AAK62469.1" /db_xref="GI:14423573" /translation="MAGPATQSPMKLMALQLLLWHSALWTVQEATPLGPASSLPQSFL LKCLEQVRKIQGDGAALQEKLVSECATYKLCHPEELVLLGHSLGIPWAPLSSCPSQAL QLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEELGMA PALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQP" variation 2504 /gene="CSF3" /frequency="0.07" /replace="G" variation 2584 /gene="CSF3" /frequency="0.08" /replace="T" variation 2589 /gene="CSF3" /frequency="0.01" /replace="C" variation 2617 /gene="CSF3" /frequency="0.05" /replace="T" variation 2725 /gene="CSF3" /frequency="0.01" /replace="C" variation 2754 /gene="CSF3" /frequency="0.01" /replace="A" variation 2764 /gene="CSF3" /frequency="0.03" /replace="T" variation 3254 /gene="CSF3" /frequency="0.03" /replace="A" variation 3370 /gene="CSF3" /frequency="0.03" /replace="A" variation 3421 /gene="CSF3" /frequency="0.02" /replace="A" variation 3456 /gene="CSF3" /frequency="0.16" /replace="A" variation 3666 /gene="CSF3" /frequency="0.03" /replace="T" variation 4050 /gene="CSF3" /frequency="0.23" /replace="T" variation 4105 /gene="CSF3" /frequency="0.03" /replace="C" variation 4145 /gene="CSF3" /frequency="0.01" /replace="A" variation 4215 /gene="CSF3" /frequency="0.47" /replace="T" variation 4480 /frequency="0.16" /replace="G" variation 4522 /frequency="0.02" /replace="T" repeat_region 4530..4762 /rpt_family="L2" /rpt_type=dispersed variation 4993 /frequency="0.02" /replace="T" variation 5168 /frequency="0.47" /replace="G" ORIGIN 1 aacccaccct caaggccagg tgcagtggct catgcctata atcccagcac tttgggaggc 61 cgaggcgggt ggatcacctg aggtcaggag ttcgagacca gcctgaccac caacatggtg 121 aaatcccacc tctactaaaa atacaaaatt agatgagcat ggtggtgcat gcctgtaatc 181 ccacctactt gggaggctga ggcaggaaaa tcactagaac cagggaggcg gaggttgtag 241 tgagccgaga tcgtgccatt gcactccagc ctgagcaatg agcgaaactc catctcaaaa 301 aaacaacaac aaaaacccac cctctactcc cagggagctg ggtacagagc tgggccacat 361 cagtgcaagg tgctgagcca cagaactcag gcggagctgc aggaccgcgg accagataac 421 agtgtgtgag atcagtgtgt gagatcagac gtccctgcca ttggtgacca ccagggggcc 481 cccaagcacc agagatggcc ccatccagtc accacatcca cttctcatcc agagatgtct 541 gtttcttggc acgctggggt aaattaggac agaaggtgac agtcttgggt gtggtcagtc 601 agactgccct tattctgcct tgtggcctgt agaaaacgtt caggcctagg ccgggcacgg 661 tgctcacgcc tgtaatccca gcactttggg aggccgaggc gggtggatca cgaggtcagg 721 agatcgtgac catcctggct aacacggtga aaccccgtct ctactaaaaa tacaaaaaat 781 tggccgggca tggtggcggg cacctgtagt tccagctact cgggaggctg aggcaggaga 841 atggcgtgaa cccgagaggc agagtttgca gtgagccgag atcgcgccac tgcactccag 901 cctgggcgac agagcaagac tccatctgga aaagaaaaag aaaacgttca ggtctgagcc 961 agaggcccag gctgtaattc tgtcacttac catgaccttg ggcaaggcac ttccttccct 1021 ggcccagttc acggggttgg aatcgactcc aaggtccctt ccagcattaa cgctgcatgg 1081 ttctaagatg agaagatggg gcagtttccc ctctctcacc ccagcccgtg tccacttcaa 1141 ggtgaatgac cagggaagtc acgtgtccca atcccgcagt tccaaagccc ttggggaccc 1201 tactgtcagg gtcgtgcacg aggaggtgaa ggtcaggtga gccaatcgcc tcgaagggtc 1261 ttgcctcatt cgggacagac atccggtttc ctctggctct accgggattc taggggcttt 1321 agccgaatga gtcatggggg gcgggggggt ttctggggga gttcccagct aatcaacttg 1381 ggacaggaca gcctggaact ttcgatggtg cctatccaag tgtggggtgg gcacagcagc 1441 caagacccaa tgtccttatc tcaggtaggg gctcaggagg tctcccagac aggcagcctc 1501 cggagagttt gggggtagga atgggagcaa ccagcttctt tttttctctc ttagaatttg 1561 ggggcttggg ggacaggctt gagaatccca aaggagaggg gcaaaggaca ctgcccccgc 1621 aagtctgcca gagcagagag ggagaccccg actcagctgc cacttcccca caggctgctg 1681 ccgcttccag gcgtctatca gcggctcagc ctttgttcag ctgttctgtt caaacactct 1741 ggggccattc aggctgggtg gggcagcggg aggaagggag tttgaggggg gcaaggcgac 1801 gtcaaaggag gatcagagat tccacaattt cacaaaactt tcgcaaacag ctttttgttc 1861 caacccccct gcattgtctt ggacaccaaa tttgcataaa tcctgggaag ttattactaa 1921 gccttagtcg tggccccagg taatttcctc ccaggcctcc atggggttat gtataaaggc 1981 ccccctagag ctgggcccca aaacagcccg gagcctgcag cccagcccca cccagaccca 2041 tggctggacc tgccacccag agccccatga agctgatggg tgagtgtctt ggcccaggat 2101 gggagagccg cctgccctgg catgggaggg aggctggtgt gacagagggg ctggggatcc 2161 ccgttctggg aatggggatt aaaggcaccc agtgtccccg agagggcctc aggtggtagg 2221 gaacagcatg tctcctgagc ccgctctgtc cccagccctg cagctgctgc tgtggcacag 2281 tgcactctgg acagtgcagg aagccacccc cctgggccct gccagctccc tgccccagag 2341 cttcctgctc aagtgcttag agcaagtgag gaagatccag ggcgatggcg cagcgctcca 2401 ggagaagctg gtgagtgagg tgggtgagag ggctgtggag ggaagcccgg tggggagagc 2461 taagggggat ggaactgcag ggccaacatc ctctggaagg gacatgggag aatattagga 2521 gcagtggagc tggggaaggc tgggaaggga cttggggagg aggaccttgg tggggacagt 2581 gctcgggagg gctggctggg atgggagtgg aggcatcaca ttcaggagaa agggcaaggg 2641 cccctgtgag atcagagagt gggggtgcag ggcagagagg aactgaacag cctggcagga 2701 catggaggga ggggaaagac cagagagtcg gggaggaccc gggaaggagc ggcgacccgg 2761 ccacggcgag tctcactcag catccttcca tccccagtgt gccacctaca agctgtgcca 2821 ccccgaggag ctggtgctgc tcggacactc tctgggcatc ccctgggctc ccctgagcag 2881 ctgccccagc caggccctgc agctggtgag tgtcaggaaa ggataaggct aatgaggagg 2941 gggaaggaga ggaggaacac ccatgggctc ccccatgtct ccaggttcca agctgggggc 3001 ctgacgtatc tcaggcagca ccccctaact cttccgctct gtctcacagg caggctgctt 3061 gagccaactc catagcggcc ttttcctcta ccaggggctc ctgcaggccc tggaagggat 3121 ctcccccgag ttgggtccca ccttggacac actgcagctg gacgtcgccg actttgccac 3181 caccatctgg cagcaggtga gccttgttgg gcagggtggc caaggtcgtg ctggcattct 3241 gggcaccaca gccgggcctg tgtatgggcc ctgtccatgc tgtcagcccc cagcatttcc 3301 tcatttgtaa taacgcccac tcagaagggc ccaaccactg atcacagctt tcccccacag 3361 atggaagaac tgggaatggc ccctgccctg cagcccaccc agggtgccat gccggccttc 3421 gcctctgctt tccagcgccg ggcaggaggg gtcctggttg cctcccatct gcagagcttc 3481 ctggaggtgt cgtaccgcgt tctacgccac cttgcccagc cctgagccaa gccctcccca 3541 tcccatgtat ttatctctat ttaatattta tgtctattta agcctcatat ttaaagacag 3601 ggaagagcag aacggagccc caggcctctg tgtccttccc tgcatttctg agtttcattc 3661 tcctgcctgt agcagtgaga aaaagctcct gtcctcccat cccctggact gggaggtaga 3721 taggtaaata ccaagtattt attactatga ctgctcccca gccctggctc tgcaatgggc 3781 actgggatga gccgctgtga gcccctggtc ctgagggtcc ccacctggga cccttgagag 3841 tatcaggtct cccacgtggg agacaagaaa tccctgttta atatttaaac agcagtgttc 3901 cccatctggg tccttgcacc cctcactctg gcctcagccg actgcacagc ggcccctgca 3961 tccccttggc tgtgaggccc ctggacaagc agaggtggcc agagctggga ggcatggccc 4021 tggggtccca cgaatttgct ggggaatctc gtttttcttc ttaagacttt tgggacatgg 4081 tttgactccc gaacatcacc gacgtgtctc ctgtttttct gggtggcctc gggacacctg 4141 ccctgccccc acgagggtca ggactgtgac tctttttagg gccaggcagg tgcctggaca 4201 tttgccttgc tggacgggga ctggggatgt gggagggagc agacaggagg aatcatgtca 4261 ggcctgtgtg tgaaaggaag ctccactgtc accctccacc tcttcacccc ccactcacca 4321 gtgtcccctc cactgtcaca ttgtaactga acttcaggat aataaagtgt ttgcctccag 4381 tcacgtcctt cctccttctt gagtccagct ggtgcctggc caggggctgg ggaggtggct 4441 gaagggtggg agaggccaga gggaggtcgg ggaggaggtc tggggaggag gtccagggag 4501 gaggaggaaa gttctcaagt tcgtctgaca ttcattccgt tagcacatat ttatctgagc 4561 acctactctg tgcagacgct gggctaagtg ctggggacac agcagggaac aaggcagaca 4621 tggaatctgc actcgagcag ccaaagcctg gcagggaaga cagaggcaca gggaccatgg 4681 gaacccggaa aggagagggc atggggtctg ggtgggctta acaggccaga cacagccaga 4741 caagatgaag ccagggagtg ctgagcatct gcaccaggct tgtcatttac catcttccat 4801 aaacttgagc ccatccatca agttgcccac aaagtggaag ccaagttcaa ggtgaccact 4861 ggggtcagag cttctctcct cagactcggt ctctgcactc gccccagctg gtcacttcct 4921 gcttgtggca gccttgggct gaagagcgct aagctcacag cccaggaggg tggggagctg 4981 tggcaagcag ggggggcagc gaccgcacca caggtgtgag gcctgcctgc agccaaagac 5041 tcctgtgtgg ctttggggta cccccaccag tccccagtcc actatctgcc caaaccttct 5101 cctcctcagc tcctcagtcc ctcccacctc ccctgcccgt ggctcctcgg aaagcagggt 5161 cagaagttcc cactgccagc tcggagtcat ccatctaggg gctcagagat gtgtgaggca 5221 ggcaaggaag ggttaaagaa aggtccggcc cctcatcccc ccgcctccca tcccccagtc 5281 cttttttgga ggcaacagat caaatcccag gctagtcaga gtgtgggtgg tgttggacca 5341 ggttcgggag acagcagagc aggccaccct gccccagcac tgtggggccc tgagccaaag 5401 cctctcccct ttcagggtac agctggcttt gggggagggg gcagcaggcc agccaacttg 5461 gctccaagga agggaagctg ctttcccctg gcccttcccc agctgagcaa gcccacatag 5521 gaccctg //