CRP Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

GTTGGCCTTA GATGTAACAC AGGGAGAGCT CATCCCTTTT AATAGAGGAA 50 | REPEAT GACAGAAAGG CTGGTACATT GGGTTGTAGG AGGATATATA AGGATATCAG 100 | REPEAT TTAGGTGTTA AGAACAGAAA GACTGAGTTA ACAGTGATTT AACAAAAGAG 150 GAGAGTATTT CTCCTTTAAG TAAATTTTCA GGTAGGCAGC CTAGAGCTGA 200 TGCAGTGGCT CCATACCCAA TTATCCAGGC TCCATCTATC TTGTTGCCAT 250 GCCAACCTCA ACATGCAGCT TACACTTGCT GGCCTGAAAG TGAACTATTC 300 CATCTCCTGC TATCATGACT GAATACTAGT CAAAGGGAAA AAGGGGGAAG 350 TGGGAGGGGA AAGCACATAC CTTTCTTAAA GAGCACAACC TAGAGATGGT 400 CCCTATTCTG TTCATATCTC GTTGGCCTTA ATTTAATCAC ATCATCACTG 450 CAAGCTACAG TGGGGGCTGG GAAATTTGGT GTTTGAGGGG ATGACCAAGC 500 GCCCAACTGA AAATGTTATT CTTCTCTTAT GAGAAGTAGA GAATGGATGT 550 TAGGGAATGG CTAGAAGACT CTACTACAAA GGATACGGTG GTTCTTTTCT 600 | REPEAT GATTGCTTCT AACTTCTCAA TGAAAGGTGA GTTCATCAGC TGAATGAAAG 650 AATAAATGAG ATTTTGGGGA CTTGAGGAGC AAGGAGAAGG AGTATAATAG 700 TCATTTTGAA GAGTGAGTTA AGTAGGGAAC TGTAGTAAGA TTGACAGACA 750 GTGTGGAGGG ATTACTTGAA TCTTGTGAAT AGAGGAAAGA GTAGAATCAG 800 | var(790):[T:0.12] ATTATCCTGA CTCCTGCCTG AAGCTTTACA TATTCAGAGA AAAATGTTGG 850 AAGAAACTTT GATATAATGC TATGTCTGTG ATCAGGCACA CATTTTACTG 900 GACTTTTACT GTCAGGGCCG TCATTTAGTG CCAAGATGTC TAGAGAGTTC 950 TTAATAAGTG TACTCAATTG GCTGAGAAAA TGTGTCCATG CAAAAAACCA 1000 | var(969):[C:0.21] | var(970):[A:0.01] | REPEAT AACACCGCAT GTTCTCACTC ATAGATGGGA ATTGAACAAT GAGAATACTT 1050 | var(1009):[G:0.21] GGACACAGGA AGGGGAACAT CACACTCTGG GGACTGTTGT GGGGTGGGGG 1100 GAGGGGGGAG GGATAGCATT AGAAGATATA CCTAATGCTA AATGATGAGT 1150 | var(1123):[G:0.11] TAATGGGTGC AGCACACCAG CATGGCACAT GTATACATAT GTAACTAACC 1200 TGCACATTGT GCACATGTAC CCTAAAACTT AAAGTATAAT AATAATAAAA 1250 AAATGTGTCC ATGGCTCTGG GAGGAGCATG TTTGTTTTCC TCATTTCCCA 1300 GTCTGTAAAT AAGCAAATTG AAAGGGGTTA GTGATAATGT CCATCTCCAG 1350 AAGCTGTCAG ATTTCCTTTG TCAAACTCTA TGATTTGGGC TGAAGTAGGT 1400 GTTGGAGAGG CAGCTACCAC GTGCACCCAG ATGGCCACTC GTTTAATATG 1450 | var(1421):[A:0.12] | var(1440):[A:0.19] TTACCATTTC CCATTATTTT CGCAGGATAG ATAGCCAAAG TGGAGCCCTG 1500 AGAGATTTCT TCATTTTTCC TGTCATAAAG AATTGGTAAT TCAGTAGTCA 1550 TAGGAGTTTG TAATAAATAA CTCACATTGA TTTCTCTGTT CTGAAATAAT 1600 TTTGCTTCCC CTCTTCCCGA AGCTCTGACA CCTGCCCCAA CAAGCAATGT 1650 | var(1632):[T:0.01] TGGAAAATTA TTTACATAGT GGCGCAAACT CCCTTACTGC TTTGGATATA 1700 AATCCAGGCA GGAGGAGGTA GCTCTAAGGC AAGAGATCTA GGACTTCTAG 1750 | var(1724):[T:0.02] | Exon 1 | UTR CCCCTGAACT TTCAGCCGAA TACATCTTTT CCAAAGGAGT GAATTCAGGC 1800 CCTTGTATCA CTGGCAGCAG GACGTGACCA TGGAGAAGCT GTTGTGTTTC 1850 M E K L L C F 7 TTGGTCTTGA CCAGCCTCTC TCATGCTTTT GGCCAGACAG GTAAGGGCCA 1900 L V L T S L S H A F G Q T 20 CCCCAGGCTA TGGGAGAGAT TTGATCTGAG GTATGGGGGT GGGGTCTAAG 1950 | var(1919):[T:0.21] ACTGCATGAA CAGTCTCAAA AAAAAAAAAA AAAGACTGTA TGAACAGAAC 2000 | NOT SCANNED AGTGGAGCAT CCTTCATGGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT 2050 GTGTGTGGTG TGTAACTGGA GAAGGGGTCA GTCTGTTTCT CAATCTTAAA 2100 TTCTATACGT AAGTGAGGGG ATAGATCTGT GTGATCTGAG AAACCTCTCA 2150 CATTTGCTTG TTTTTCTGGC TCACAGACAT GTCGAGGAAG GCTTTTGTGT 2200 | Exon 2 D M S R K A F V 28 TTCCCAAAGA GTCGGATACT TCCTATGTAT CCCTCAAAGC ACCGTTAACG 2250 F P K E S D T S Y V S L K A P L T 45 AAGCCTCTCA AAGCCTTCAC TGTGTGCCTC CACTTCTACA CGGAACTGTC 2300 K P L K A F T V C L H F Y T E L S 62 CTCGACCCGT GGGTACAGTA TTTTCTCGTA TGCCACCAAG AGACAAGACA 2350 S T R G Y S I F S Y A T K R Q D 78 ATGAGATTCT CATATTTTGG TCTAAGGATA TAGGATACAG TTTTACAGTG 2400 N E I L I F W S K D I G Y S F T V 95 GGTGGGTCTG AAATATTATT CGAGGTTCCT GAAGTCACAG TAGCTCCAGT 2450 G G S E I L F E V P E V T V A P V 112 ACACATTTGT ACAAGCTGGG AGTCCGCCTC AGGGATCGTG GAGTTCTGGG 2500 H I C T S W E S A S G I V E F W 128 TAGATGGGAA GCCCAGGGTG AGGAAGAGTC TGAAGAAGGG ATACACTGTG 2550 V D G K P R V R K S L K K G Y T V 145 GGGGCAGAAG CAAGCATCAT CTTGGGGCAG GAGCAGGATT CCTTCGGTGG 2600 G A E A S I I L G Q E Q D S F G G 162 GAACTTTGAA GGAAGCCAGT CCCTGGTGGG AGACATTGGA AATGTGAACA 2650 N F E G S Q S L V G D I G N V N 178 TGTGGGACTT TGTGCTGTCA CCAGATGAGA TTAACACCAT CTATCTTGGC 2700 | var(2667):[C:0.03] M W D F V L S P D E I N T I Y L G 195 GGGCCCTTCA GTCCTAATGT CCTGAACTGG CGGGCACTGA AGTATGAAGT 2750 G P F S P N V L N W R A L K Y E V 212 GCAAGGCGAA GTGTTCACCA AACCCCAGCT GTGGCCCTGA GGCCCAGCTG 2800 | UTR Q G E V F T K P Q L W P 224 TGGGTCCTGA AGGTACCTCC CGGTTTTTTA CACCGCATGG GCCCCACGTC 2850 TCTGTCTCTG GTACCTCCCG CTTTTTTACA CTGCATGGTT CCCACGTCTC 2900 | var(2892):[T:0.01] TGTCTCTGGG CCTTTGTTCC CCTATATGCA TTGCAGGCCT GCTCCACCCT 2950 CCTCAGCGCC TGAGAATGGA GGTAAAGTGT CTGGTCTGGG AGCTCGTTAA 3000 CTATGCTGGG AAACGGTCCA AAAGAATCAG AATTTGAGGT GTTTTGTTTT 3050 | var(3006):[A:0.16] | var(3014):[T:0.23] CATTTTTATT TCAAGTTGGA CAGATCTTGG AGATAATTTC TTACCTCACA 3100 | REPEAT TAGATGAGAA AACTAACACC CAGAAAGGAG AAATGATGTT ATAAAAAACT 3150 CATAAGGCAA GAGCTGAGAA GGAAGCGCTG ATCTTCTATT TAATTCCCCA 3200 CCCATGACCC CCAGAAAGCA GGAGGGCATT GCCCACATTC ACAGGGCTCT 3250 TCAGTCTCAG AATCAGGACA CTGGCCAGGT GTCTGGTTTG GGTCCAGAGT 3300 GCTCATCATC ATGTCATAGA ACTGCTGGGC CCAGGTCTCC TGAAATGGGA 3350 AGCCCAGCAA TACCACGCAG TCCCTCCACT TTCTCAAAGC ACACTGGAAA 3400 GGCCATTAGA ATTGCCCCAG CAGAGCAGAT CTGCTTTTTT TCCAGAGCAA 3450 AATGAAGCAC TAGGTATAAA TATGTTGTTA CTGCCAAGAA CTTAAATGAC 3500 TGGTTTTTGT TTGCTTGCAG TGCTTTCTTA ATTTTATGGC TCTTCTGGGA 3550 AACTCCTCCC CTTTTCCACA CGAACCTTGT GGGGCTGTGA ATTCTTTCTT 3600 | var(3577):[C:0.02] CATCCCCGCA TTCCCAATAT ACCCAGGCCA CAAGAGTGGA CGTGAACCAC 3650 | REPEAT AGGGTGTCCT GTCAGAGGAG CCCATCTCCC ATCTCCCCAG CTCCCTATCT 3700 GGAGGATAGT TGGATAGTTA CGTGTTCCTA GCAGGACCAA CTACAGTCTT 3750 CCCAAGGATT GAGTTATGGA CTTTGGGAGT GAGACATCTT CTTGCTGCTG 3800 GATTTCCAAG CTGAGAGGAC GTGAACCTGG GACCACCAGT AGCCATCTTG 3850 TTTGCCACAT GGAGAGAGAC TGTGAGGACA GAAGCCAAAC TGGAAGTGGA 3900 | var(3872):[A:0.19] GGAGCCAAGG GATTGACAAA CAACAGAGCC TTGACCACGT GGAGTCTCTG 3950 AATCAGCCTT GTCTGGAACC AGATCTACAC CTGGACTGCC CAGGTCTATA 4000 AGCCAATAAA GCCCCTGTTT ACTTGAGTGA GTCCAAGCTG TTTTCTGATA 4050 GTTGCTTTAG AAGTTGTGAC TAACTTCTCT AATGACCTTT GAAATCAAGT 4100 | var(4069):[G:0.05] CCCTGTAAGT TTACACTTCC CATTACACAA CATATCCATG GCACTTTAAC 4150 CTGTCCAAGA GTCCCCTGAA GGGATTCCCT CTGACAAGCA CAGTCCCTCT 4200 TTTGAGATAG CTGGCCATTC ATGTAGGGCC AGTTGTGGGG GTTTTAGTAC 4250 TCTCATTCTA TCATTATTCC AATTTGAGGA GCAAAAACTA AAGATCATTG 4300 AGATCCATGG ATCTGCTGCC AGGTTCAGTG ACTGGAATGC ACTTGCCCCA 4350 GCGGGTTCAA GTTCTTTGTA GAAACAGACC CCTCAAAGAT GACAGCAGCT 4400 | var(4362):[A:0.02] GGCTTCCTCC AGAAGTGTCC TTCAACACTG TCTTTCAGTA CTAAGTGACC 4450 AGTAGAAGTT ACTCCATAAA GACCATAGCC AGGAATGAAT TATGGGGCTT 4500 CCTGCATATC AAATGGTTAC CTAGGGAAGG CATATGGTAA ACTAGTTAAG 4550 | REPEAT CACAGAGGTT CTGGAATCAG ACTGCCTAGG TCCAAATCCT GGCTTTACAA 4600 CTTACTAGCT ATGTGACCTT AGGTGATATA ACCTCTTTAC GCCTCAGTTT 4650 TCTTACCTAC AAAGCAGGAG AAATAATAGT AATTAGCTCA AAGGGTTGCT 4700 ATAAGAATCA AAGAAAATCA TGCAAGCAAA GCACTTACTA CAGTGCCTGG 4750 | var(4741):[G:0.20] CACATAGTAA GCTCTTATAA CAGTTTTCTG GTATTATTCT TATTAAGCCA 4800 TTTTGTATTA TATCCATAAA TGTAGATTCA TAAAATACAT AAAAATACAA 4850 CTTGGTAGAA TTTGTCTTGG TTGGCAGCAG TTGAAGCTTC TCATTTGCTA 4900 AGAATTAGGT TTAGAATGTT AGAAGGGTGA ACAACAAGTC TTTGAAGCCA 4950 TTATTTATGA ATATTGACTT CTCTAATTGA CTTTTGATAA CCATTTGTAA 5000 | var(4974):[G:0.13] GCATAGAAGC TAAGGATACA TTCTCAGACA AAAATGAGAG TGCAAATACT 5050 CTCTGTTGTC CAATTAGGGC AGATCCATCC ATCCTCACAT TCAGCTAAGC 5100 AGAAGAGAGG ATTGACACTC TTTTCTAGTT AAATAATCCA GATACGTCTT 5150 AATTATAGAA GGCCATCCCA ACTCCCCAGG GATGTAGGTT GAGCTAATAT 5200 TTTCTTCAGA ATTCAGTTGC TTGCATCTTA CTATACATAG TCTGGTAGAC 5250 | var(5237):[G:0.21] AGCCTCTGGC CTTAATAATT TGAGCCAGGA AAATCTTAAC AGCTGGTATT 5300 | var(5288):[C:0.01] TGCATTCAGA GAACATTAAA AAATCTTAAC AAAGCATTCG TAGGATGTTT 5350 AGATTTAAGC AATTTAGCCT ACTGGTGGGT ACATCAATGT AAACTTGTTG 5400 GAAAATGTAT TTCCAGGTAA CTGGTGAATT GTCATACCAT ATAGAGCTAT 5450 TAGATGTAAT CCAATTAAAT GTTAGATGAC ATCTGCCAAA GAAGATGATT 5500 CTGATTTGGG CATGTTGGTT CTAAGCAATG CTTTTTTTTT TTTGCAGTAA 5550 GTGGAGAGTA AGATCAAACA TCCACCGTGG CCACTTCTAG CTGATGCTAA 5600 TAAAACCATG TTGTCAGGAC TGGTTTTCTG TTAGAGTAGG GACCATGGAT 5650 | var(5606):[A:0.02] CCAATTTTTC CAGAAGTAGA ATCAGGCCTC AAGGAATGAG TTAAAAAGAC 5700 | var(5676):[T:0.01] ATAGGGACAA ATGGTCTATA AAACCTATAA TAGAAAGGAG GTGAAAGCGG 5750 | var(5728):[C:0.01] GGTGGTGGCC CAGTGCCTGA AGAGATACTG TAGTGCATTT ACAGGCCAAA 5800 TAAGAGAAAG TAGAACAATA GTATGAATCA GAGATGATGG AGGCTGCTAC 5850 TTGATAGAAC ACTTTCTTTT TGGAACTGAA AATAGCCATG TTGGTATAAG 5900 GGTTAGGGCC AGGCCTGACC CTAATGTAAG CGCCTTAGCA TGGGATGTGA 5950 TATGGAGATG TGCAGATCAG AAACCTAAAA TCTCCCTGTG TCAGAAAAAA 6000 ATGTTAGCTC ACTGGCCAGG CAACAAGACT TGCACACTTT CCAAAAAGAG 6050 GTGGTCATGG AGAGAGCATT GTTAAGAATG GGCTGCATGT CAGGCCAGGT 6100 GAGTGGATGA GAAGCCACCT CTGTGATGAG ACTTGGTCTA TCCAGGCCCT 6150 | var(6150):[:0.11] GGAGGAGAGA GTACAGGCTG CCTCAAAAGT GAGGCTGGGA CCTGATGGAA 6200 | var(6192):[A:0.20] ATGGATTTGG AGTCCCAGCT GACAAAGTAA GTAGAATGTT AAATCTGTGA 6250 TATTCTCCCC CATGCTTTCA CTATCCTCAA GTTTGATGTG CCCCAGGCAA 6300 GCAAAGATTG ACAAAGGAAG CAAATGACTC TAGATGATTG AGCACCACCA 6350 | var(6333):[:0.12] CCACGTAGAT CAAATTTCCA AAGTATAGAT TTCTGATCAC TAGAATCCCA 6400 GGGAAAAGAG AAGCACTGCT TTGATTTCTA GGTAGCTTAT CCTAGGACAA 6450 CTGCCCACTA GTCTCAGATG GGTTGTCGTA CTTGCCTGGA TTCCTTCTCT 6500 | var(6469):[G:0.22] TCAGCTCCCT GTCTCTATTT CAAATATGCA TCTTTTCATT TCCTCTGCAC 6550 TAGAACGTAG GTTAAGCGGG CTTGTTAGCC TTTTCCTTCT GAAAATGCAG 6600 | var(6556):[T:0.02] ACTCCTAGCT CAAATTTCCT GGATCACCTG GCCCAGTGAT CACTTATAGT 6650 | REPEAT CTGCTGATTA CAGGCATCAT TTTCCTCTGG GGTGTTTGAG TATAGATTCA 6700 | var(6677):[T:0.01] TTGACCCCAG TCCTCCTAGA GTAGATTCTC TGGGGTTAGT GCTCAGGAAT 6750 ATGCAAGATC ACAAGCTCTT TTGTACCATG TGCTTTTAGA GCTATCACTG 6800 TAGTGTTTTC CTGACAGCTC AGATTTCTTA TCTCAG