Site Genotype1 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype2 AD-pop ED-pop HD-pop XD-pop Total-pop Genotype3 AD-pop ED-pop HD-pop XD-pop Total-pop AD-chi2 ED-chi2 HD-chi2 XD-chi2 Total-chi2 001194 CC 0 0 0 0 0 CG 3 0 0 0 3 GG 21 23 21 23 88 0.107 0.000 0.000 0.000 0.026 001203 AA 0 0 0 0 0 AG 1 1 1 0 3 GG 23 22 20 24 89 0.011 0.011 0.012 0.000 0.025 001233 AA 0 0 0 0 0 AC 0 2 0 0 2 CC 24 21 22 24 91 0.000 0.048 0.000 0.000 0.011 001277 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 24 23 20 24 91 0.000 0.000 0.012 0.000 0.003 005561 AA 0 0 0 0 0 AT 0 0 0 1 1 TT 24 23 22 23 92 0.000 0.000 0.000 0.011 0.003 006335 -- 0 0 0 0 0 +- 0 1 0 0 1 ++ 24 23 22 24 93 0.000 0.011 0.000 0.000 0.003 006400 AA 24 24 21 24 93 AC 0 0 1 0 1 CC 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 007941 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 21 23 22 22 88 0.048 0.000 0.000 0.000 0.011 007949 CC 21 23 22 22 88 CG 2 0 0 0 2 GG 0 0 0 0 0 0.048 0.000 0.000 0.000 0.011 008344 CC 22 23 22 24 91 CT 2 0 0 0 2 TT 0 0 0 0 0 0.045 0.000 0.000 0.000 0.011 008360 AA 0 0 0 0 0 AG 0 1 0 0 1 GG 24 22 22 22 90 0.000 0.011 0.000 0.000 0.003 008438 CC 0 0 0 0 0 CT 2 0 0 0 2 TT 22 24 22 24 92 0.045 0.000 0.000 0.000 0.011 008749 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 21 22 21 23 87 0.012 0.000 0.000 0.000 0.003 009361 AA 24 23 21 22 90 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 009430 AA 23 23 21 23 90 AG 1 0 0 0 1 GG 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 009504 CC 14 22 18 19 73 CT 10 1 3 3 17 TT 0 0 0 0 0 1.662 0.011 0.124 0.118 0.979 009876 CC 23 24 17 21 85 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.012 0.003 010710 AA 3 22 5 1 31 AG 11 2 13 6 32 GG 10 0 4 17 31 0.000 0.045 0.747 0.240 9.574 017006 CC 0 0 0 0 0 CG 0 0 1 0 1 GG 23 24 21 23 91 0.000 0.000 0.012 0.000 0.003 017008 AA 0 0 0 0 0 AG 9 1 3 3 16 GG 14 23 19 20 76 1.361 0.011 0.118 0.112 0.834 017022 CC 23 23 21 23 90 CT 0 1 1 0 2 TT 0 0 0 0 0 0.000 0.011 0.012 0.000 0.011 017023 CC 23 23 22 23 91 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.011 0.000 0.000 0.003 017099 -- 0 0 0 0 0 +- 1 0 0 0 1 ++ 21 21 20 20 82 0.012 0.000 0.000 0.000 0.003 017273 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 20 22 19 21 82 0.012 0.000 0.000 0.000 0.003 017341 -- 14 20 16 17 67 +- 7 1 3 3 14 ++ 0 0 0 0 0 0.840 0.012 0.140 0.131 0.725 017984 AA 14 23 19 21 77 AG 10 1 3 3 17 GG 0 0 0 0 0 1.662 0.011 0.118 0.107 0.929 018189 CC 23 24 22 24 93 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 018241 CC 12 24 8 2 46 CT 11 0 12 7 30 TT 1 0 2 15 18 0.618 0.000 0.702 0.730 8.435 018301 AA 23 22 21 24 90 AG 0 0 1 0 1 GG 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 019458 GG 0 0 0 0 0 GT 1 0 0 0 1 TT 20 21 18 19 78 0.012 0.000 0.000 0.000 0.003 019824 AA 3 22 5 1 31 AG 8 2 12 6 28 GG 12 0 5 17 34 0.733 0.045 0.182 0.240 14.674 021226 AA 0 0 0 0 0 AG 2 0 1 0 3 GG 21 24 21 23 89 0.048 0.000 0.012 0.000 0.025 021756 AA 19 18 19 21 77 AG 0 0 0 1 1 GG 0 0 0 0 0 0.000 0.000 0.000 0.012 0.003 022594 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 23 24 21 24 92 0.000 0.000 0.012 0.000 0.003 022947 AA 22 24 21 22 89 AC 2 0 1 0 3 CC 0 0 0 0 0 0.045 0.000 0.012 0.000 0.025 023305 CC 23 24 22 24 93 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 025428 AA 19 20 22 22 83 AG 3 0 0 0 3 GG 0 0 0 0 0 0.118 0.000 0.000 0.000 0.027 027123 AA 23 23 20 21 87 AG 1 1 2 3 7 GG 0 0 0 0 0 0.011 0.011 0.050 0.107 0.141 027297 AA 0 0 0 0 0 AG 9 1 3 3 16 GG 15 23 19 21 78 1.278 0.011 0.118 0.107 0.813 027519 AA 18 18 17 12 65 AG 1 0 0 0 1 GG 0 0 0 0 0 0.014 0.000 0.000 0.000 0.004 031301 CC 23 24 22 22 91 CT 0 0 0 1 1 TT 0 0 0 0 0 0.000 0.000 0.000 0.011 0.003 031493 CC 3 22 5 1 31 CT 7 2 12 6 27 TT 12 0 5 15 32 1.223 0.045 0.182 0.153 14.395 031746 CC 21 24 22 23 90 CT 2 0 0 0 2 TT 0 0 0 0 0 0.048 0.000 0.000 0.000 0.011 031793 CC 0 0 0 0 0 CT 1 0 0 0 1 TT 22 24 19 23 88 0.011 0.000 0.000 0.000 0.003 032065 CC 21 24 22 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.012 0.000 0.000 0.000 0.003 032997 -- 0 0 0 0 0 +- 1 1 2 0 4 ++ 23 18 19 21 81 0.011 0.014 0.053 0.000 0.049 033694 CC 24 23 22 23 92 CT 0 1 0 0 1 TT 0 0 0 0 0 0.000 0.011 0.000 0.000 0.003 033917 CC 0 0 0 0 0 CG 2 0 0 0 2 GG 22 24 22 23 91 0.045 0.000 0.000 0.000 0.011 034065 CC 23 24 22 23 92 CT 1 0 0 0 1 TT 0 0 0 0 0 0.011 0.000 0.000 0.000 0.003 034074 CC 20 23 20 23 86 CT 4 1 2 0 7 TT 0 0 0 0 0 0.198 0.011 0.050 0.000 0.142 034534 AA 0 0 0 0 0 AG 1 0 0 0 1 GG 23 24 22 24 93 0.011 0.000 0.000 0.000 0.003 034874 AA 0 0 0 0 0 AG 0 0 1 0 1 GG 22 24 21 24 91 0.000 0.000 0.012 0.000 0.003 034947 CC 22 24 21 24 91 CT 0 0 1 0 1 TT 0 0 0 0 0 0.000 0.000 0.012 0.000 0.003 034967 AA 0 0 0 0 0 AC 3 0 0 0 3 CC 19 24 22 24 89 0.118 0.000 0.000 0.000 0.025 034979 CC 21 24 22 24 91 CT 1 0 0 0 1 TT 0 0 0 0 0 0.012 0.000 0.000 0.000 0.003 035004 AA 0 0 0 0 0 AG 2 0 0 0 2 GG 20 24 22 24 90 0.050 0.000 0.000 0.000 0.011 Note: AD: African_Descent ED: European_Descent HD: Hispanic_Descent XD: Asian_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 006335: t 017099: a 017341: T 032997: gaa