Site CDNA-Pos Description Allele1 AD-freq ED-freq HD-freq XD-freq Total-freq Allele2 AD-freq ED-freq HD-freq XD-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001194 00088 NON-SYN G 0.94 1.00 1.00 1.00 0.98 C 0.06 0.00 0.00 0.00 0.02 0003 GGC GCC GLY(G) ALA(A) 001203 00097 NON-SYN G 0.98 0.98 0.98 1.00 0.98 A 0.02 0.02 0.02 0.00 0.02 0006 GGT GAT GLY(G) ASP(D) 001233 00000 ------------ C 1.00 0.96 1.00 1.00 0.99 A 0.00 0.04 0.00 0.00 0.01 0000 --- --- --- --- 001277 00000 ------------ G 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 005561 00000 ------------ T 1.00 1.00 1.00 0.98 0.99 A 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 006335 00000 ------------ - 0.00 0.02 0.00 0.00 0.01 + 1.00 0.98 1.00 1.00 0.99 0000 --- --- --- --- 006400 00271 NON-SYN A 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.02 0.00 0.01 0064 GAC GCC ASP(D) ALA(A) 007941 00000 ------------ G 0.96 1.00 1.00 1.00 0.99 A 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 007949 00000 ------------ C 0.96 1.00 1.00 1.00 0.99 G 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008344 00000 ------------ C 0.96 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008360 00000 ------------ G 1.00 0.98 1.00 1.00 0.99 A 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 008438 00000 ------------ T 0.96 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 008749 00000 ------------ T 0.98 1.00 1.00 1.00 0.99 C 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009361 00000 ------------ A 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 009430 00000 ------------ A 0.98 1.00 1.00 1.00 0.99 G 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 009504 00000 ------------ C 0.79 0.98 0.93 0.93 0.91 T 0.21 0.02 0.07 0.07 0.09 0000 --- --- --- --- 009876 00999 NON-SYN C 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.02 0.01 0307 CAT TAT HIS(H) TYR(Y) 010710 01654 NON-SYN G 0.65 0.04 0.48 0.83 0.50 A 0.35 0.96 0.52 0.17 0.50 0525 AGC AAC SER(S) ASN(N) 017006 00000 ------------ G 1.00 1.00 0.98 1.00 0.99 C 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 017008 00000 ------------ G 0.80 0.98 0.93 0.93 0.91 A 0.20 0.02 0.07 0.07 0.09 0000 --- --- --- --- 017022 00000 ------------ C 1.00 0.98 0.98 1.00 0.99 T 0.00 0.02 0.02 0.00 0.01 0000 --- --- --- --- 017023 00000 ------------ C 1.00 0.98 1.00 1.00 0.99 T 0.00 0.02 0.00 0.00 0.01 0000 --- --- --- --- 017099 00000 ------------ - 0.02 0.00 0.00 0.00 0.01 + 0.98 1.00 1.00 1.00 0.99 0000 --- --- --- --- 017273 01812 NON-SYN G 0.98 1.00 1.00 1.00 0.99 A 0.02 0.00 0.00 0.00 0.01 0578 GCA ACA ALA(A) THR(T) 017341 00000 ------------ - 0.83 0.98 0.92 0.93 0.91 + 0.17 0.02 0.08 0.07 0.09 0000 --- --- --- --- 017984 00000 ------------ A 0.79 0.98 0.93 0.94 0.91 G 0.21 0.02 0.07 0.06 0.09 0000 --- --- --- --- 018189 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 018241 00000 ------------ C 0.73 1.00 0.64 0.23 0.65 T 0.27 0.00 0.36 0.77 0.35 0000 --- --- --- --- 018301 00000 ------------ A 1.00 1.00 0.98 1.00 0.99 G 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 019458 00000 ------------ T 0.98 1.00 1.00 1.00 0.99 G 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 019824 00000 ------------ G 0.70 0.04 0.50 0.83 0.52 A 0.30 0.96 0.50 0.17 0.48 0000 --- --- --- --- 021226 00000 ------------ G 0.96 1.00 0.98 1.00 0.98 A 0.04 0.00 0.02 0.00 0.02 0000 --- --- --- --- 021756 00000 ------------ A 1.00 1.00 1.00 0.98 0.99 G 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 022594 02493 NON-SYN G 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.02 0.00 0.01 0805 GGA AGA GLY(G) ARG(R) 022947 00000 ------------ A 0.96 1.00 0.98 1.00 0.98 C 0.04 0.00 0.02 0.00 0.02 0000 --- --- --- --- 023305 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 025428 00000 ------------ A 0.93 1.00 1.00 1.00 0.98 G 0.07 0.00 0.00 0.00 0.02 0000 --- --- --- --- 027123 00000 ------------ A 0.98 0.98 0.95 0.94 0.96 G 0.02 0.02 0.05 0.06 0.04 0000 --- --- --- --- 027297 00000 ------------ G 0.81 0.98 0.93 0.94 0.91 A 0.19 0.02 0.07 0.06 0.09 0000 --- --- --- --- 027519 00000 ------------ A 0.97 1.00 1.00 1.00 0.99 G 0.03 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031301 00000 ------------ C 1.00 1.00 1.00 0.98 0.99 T 0.00 0.00 0.00 0.02 0.01 0000 --- --- --- --- 031493 00000 ------------ T 0.70 0.04 0.50 0.82 0.51 C 0.30 0.96 0.50 0.18 0.49 0000 --- --- --- --- 031746 00000 ------------ C 0.96 1.00 1.00 1.00 0.99 T 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 031793 00000 ------------ T 0.98 1.00 1.00 1.00 0.99 C 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 032065 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 032997 03675 FRAME SHIFT - 0.02 0.03 0.05 0.00 0.02 + 0.98 0.97 0.95 1.00 0.98 1199 --- GAA --- --- 033694 03802 NON-SYN C 1.00 0.98 1.00 1.00 0.99 T 0.00 0.02 0.00 0.00 0.01 1241 GCC GTC ALA(A) VAL(V) 033917 00000 ------------ G 0.96 1.00 1.00 1.00 0.99 C 0.04 0.00 0.00 0.00 0.01 0000 --- --- --- --- 034065 03910 NON-SYN C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 1277 CCT CTT PRO(P) LEU(L) 034074 03919 NON-SYN C 0.92 0.98 0.95 1.00 0.96 T 0.08 0.02 0.05 0.00 0.04 1280 TCA TTA SER(S) LEU(L) 034534 04072 NON-SYN G 0.98 1.00 1.00 1.00 0.99 A 0.02 0.00 0.00 0.00 0.01 1331 CGA CAA ARG(R) GLN(Q) 034874 00000 ------------ G 1.00 1.00 0.98 1.00 0.99 A 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 034947 00000 ------------ C 1.00 1.00 0.98 1.00 0.99 T 0.00 0.00 0.02 0.00 0.01 0000 --- --- --- --- 034967 00000 ------------ C 0.93 1.00 1.00 1.00 0.98 A 0.07 0.00 0.00 0.00 0.02 0000 --- --- --- --- 034979 00000 ------------ C 0.98 1.00 1.00 1.00 0.99 T 0.02 0.00 0.00 0.00 0.01 0000 --- --- --- --- 035004 00000 ------------ G 0.95 1.00 1.00 1.00 0.99 A 0.05 0.00 0.00 0.00 0.01 0000 --- --- --- --- NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006335: T 017099: A 017341: T 032997: GAA