Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000127 A 8 2 10 G 32 38 70 000293 T 8 32 40 C 40 12 52 000498 T 32 2 34 G 16 42 58 000511 A 4 0 4 G 44 44 88 001262 G 0 2 2 A 48 42 90 001384 T 1 0 1 A 47 44 91 001424 T 4 0 4 G 44 44 88 001489 A 11 0 11 T 35 44 79 001708 T 2 10 12 C 42 26 68 001769 C 1 0 1 G 43 36 79 001844 C 10 1 11 T 34 37 71 001960 G 3 0 3 A 41 36 77 002012 A 1 0 1 T 43 36 79 002676 C 10 2 12 T 36 42 78 002683 A 3 0 3 G 43 44 87 002832 G 2 2 4 A 46 42 88 003155 C 32 2 34 T 16 40 56 003291 G 2 0 2 C 44 42 86 003692 C 11 2 13 A 33 40 73 013177 A 0 2 2 G 44 36 80 013261 G 3 8 11 A 41 30 71 013496 A 11 0 11 G 33 38 71 015258 A 4 11 15 T 34 29 63 015301 G 0 9 9 A 40 31 71 015334 C 3 0 3 T 37 40 77 015604 T 0 1 1 C 38 39 77 015614 T 3 0 3 C 35 40 75 015897 G 6 28 34 A 34 12 46 015987 G 5 0 5 A 35 40 75 016179 C 0 1 1 T 46 45 91 016261 T 3 10 13 G 43 34 77 021111 A 7 22 29 G 41 10 51 021168 G 0 1 1 A 48 31 79 021683 + 2 7 9 - 46 23 69 022050 G 5 0 5 A 39 40 79 022258 C 4 0 4 T 40 38 78 022641 A 0 1 1 G 46 45 91 022765 + 4 2 6 - 40 38 78 022867 C 8 34 42 T 36 12 48 023028 G 8 32 40 A 40 12 52 023144 A 0 1 1 G 46 43 89 023653 T 1 0 1 C 31 26 57 023775 A 0 1 1 G 42 43 85 024178 T 18 0 18 C 30 46 76 024520 - 1 9 10 + 45 31 76 024557 T 0 1 1 C 46 39 85 026048 T 3 0 3 G 43 44 87 026098 + 1 0 1 - 43 36 79 026972 T 7 8 15 G 37 24 61 027057 A 5 8 13 G 37 24 61 027183 C 2 9 11 T 44 25 69 027185 G 0 1 1 C 46 33 79 027451 C 3 0 3 T 45 44 89 028834 C 0 2 2 T 44 36 80 029265 C 3 0 3 T 41 42 83 029409 T 14 10 24 C 30 32 62 030367 C 3 0 3 T 31 42 73 032003 T 1 0 1 A 37 40 77 032092 A 1 0 1 G 37 40 77 032327 C 3 0 3 A 37 40 77 032541 G 12 8 20 A 28 32 60 032628 C 29 6 35 T 19 30 49 032703 A 2 0 2 G 46 28 74 032861 C 0 1 1 T 48 27 75 032921 - 5 7 12 + 43 21 64 033077 C 1 1 2 A 47 27 74 033419 G 26 11 37 A 22 35 57 033631 T 28 11 39 C 18 33 51 033977 A 0 1 1 T 46 43 89 034085 G 11 0 11 A 35 44 79 035121 A 17 10 27 C 31 32 63 035201 T 3 0 3 C 43 40 83 035322 C 0 1 1 T 46 41 87 035637 C 1 0 1 G 45 42 87 035639 C 4 0 4 T 42 42 84 035789 A 1 0 1 T 45 46 91 035946 A 4 0 4 G 42 46 88 036077 C 13 12 25 G 33 34 67 036115 G 2 0 2 A 44 46 90 036139 T 1 0 1 A 45 46 91 036404 T 7 0 7 A 39 44 83 036421 - 0 1 1 + 46 45 91 036510 T 14 12 26 C 34 34 68 036540 A 12 10 22 C 34 26 60 037002 A 15 11 26 T 31 23 54 037068 A 2 0 2 G 44 34 78 037379 G 4 0 4 A 44 44 88 037414 A 1 1 2 G 47 33 80 037467 T 1 0 1 C 39 32 71 037534 G 1 0 1 A 39 32 71 037861 T 5 9 14 G 31 23 54 037902 - 3 0 3 + 31 32 63 039294 G 6 12 18 T 42 34 76 039560 G 2 0 2 T 46 46 92 039702 G 14 12 26 A 34 34 68 039975 C 12 0 12 T 36 46 82 040034 C 14 12 26 T 34 34 68 040550 C 5 21 26 T 41 17 58 040918 C 4 0 4 A 44 44 88 040933 G 3 0 3 T 45 44 89 041058 A 12 11 23 G 32 33 65 041261 A 14 12 26 G 34 34 68 041410 T 2 10 12 A 44 36 80 041526 C 25 11 36 T 21 35 56 041530 T 25 11 36 C 21 35 56 041532 G 0 2 2 T 46 44 90 041762 T 0 2 2 C 44 44 88 041792 A 5 11 16 T 39 35 74 056596 C 0 1 1 A 44 41 85 056658 G 4 17 21 A 40 27 67 056900 C 5 15 20 G 39 27 66 056902 A 5 15 20 T 39 29 68 057038 - 0 1 1 + 44 41 85 057510 T 25 12 37 G 19 30 49 057732 A 14 13 27 T 30 29 59 057960 C 14 13 27 A 30 29 59 063143 G 15 21 36 A 27 21 48 063315 C 9 14 23 A 33 28 61 063744 G 19 21 40 A 27 21 48 063753 G 3 0 3 A 43 42 85 063867 G 3 0 3 A 43 42 85 063941 G 4 0 4 A 42 42 84 065080 A 3 0 3 G 41 40 81 065110 A 14 20 34 C 30 20 50 065155 G 2 0 2 T 42 40 82 065189 G 17 20 37 T 27 20 47 065371 T 16 11 27 C 28 31 59 065372 G 25 12 37 A 19 28 47 065387 G 3 0 3 A 41 42 83 065422 G 8 13 21 T 36 29 65 065652 C 3 0 3 T 39 42 81 065810 + 1 0 1 - 39 36 75 066212 A 7 0 7 G 35 42 77 066470 A 0 1 1 C 42 41 83 066551 A 3 0 3 G 43 46 89 066708 C 2 10 12 T 40 36 76 066775 C 7 0 7 A 35 46 81 066793 G 0 1 1 A 42 45 87 066861 T 3 0 3 C 39 46 85 067042 G 1 0 1 A 41 46 87 072947 T 2 5 7 C 44 35 79 073177 T 4 15 19 C 42 29 71 073269 C 9 15 24 A 37 29 66 073458 A 0 1 1 G 42 43 85 073467 A 0 1 1 T 42 43 85 073471 A 8 15 23 G 34 29 63 073537 - 4 0 4 + 42 44 86 073739 C 0 4 4 T 40 42 82 073856 T 1 0 1 A 39 46 85 073874 T 0 2 2 C 40 44 84 073897 A 2 0 2 G 38 46 84 073907 C 1 0 1 T 39 46 85 073958 A 0 2 2 G 40 44 84 074250 A 6 15 21 G 34 31 65 074364 T 0 1 1 C 40 45 85 074550 G 0 1 1 T 48 39 87 074560 T 0 2 2 C 48 38 86 074597 - 10 0 10 + 38 40 78 074893 C 1 0 1 T 27 40 67 075960 C 17 22 39 T 31 24 55 076046 G 3 0 3 T 39 46 85 076541 G 1 6 7 A 41 38 79 076668 + 1 0 1 - 41 44 85 076878 A 3 0 3 T 37 44 81 076934 G 3 0 3 A 35 44 79 077082 A 1 0 1 G 47 44 91 077537 T 4 13 17 C 44 31 75 077636 A 5 0 5 G 43 46 89 077657 G 0 1 1 A 48 45 93 077675 G 0 5 5 T 48 41 89 077733 G 15 22 37 A 31 24 55 077977 T 4 0 4 C 42 46 88 078062 + 2 0 2 - 42 42 84 078090 T 2 10 12 C 46 36 82 078688 - 16 9 25 + 22 27 49 078888 - 3 7 10 + 41 39 80 079074 A 8 14 22 G 22 26 48 079196 + 0 1 1 - 36 43 79 079267 G 21 14 35 A 17 30 47 079455 T 2 7 9 A 36 37 73 079456 C 1 0 1 T 37 44 81 079493 T 2 0 2 C 36 44 80 079515 T 2 8 10 G 36 36 72 079749 * 085363 C 17 18 35 T 23 18 41 085436 C 13 18 31 A 27 20 47 085756 A 4 0 4 G 36 40 76 085801 A 14 7 21 G 26 33 59 085813 A 10 7 17 G 30 33 63 085819 A 21 14 35 C 19 26 45 085971 T 6 0 6 C 34 38 72 086324 C 2 7 9 T 42 37 79 086458 C 6 0 6 A 38 44 82 086476 A 3 0 3 C 41 44 85 086690 G 14 0 14 T 30 44 74 086730 C 4 15 19 A 40 29 69 087004 T 5 0 5 C 41 42 83 087204 G 1 0 1 A 45 42 87 087446 T 0 1 1 C 48 43 91 087481 T 10 0 10 G 38 44 82 087670 A 3 0 3 G 45 42 87 087781 C 0 1 1 G 48 41 89 087819 A 10 0 10 G 38 42 80 087850 A 1 0 1 G 47 42 89 088140 C 0 1 1 T 48 41 89 088489 C 2 0 2 T 40 34 74 088705 G 3 0 3 A 39 36 75 088972 A 5 0 5 C 37 38 75 088976 C 10 0 10 T 32 38 70 089171 T 0 1 1 A 42 37 79 089196 C 3 0 3 T 39 36 75 089259 G 2 7 9 A 38 31 69 089444 A 3 0 3 G 35 38 73 089456 G 0 1 1 C 38 37 75 089464 C 9 0 9 A 29 38 67 089476 T 3 0 3 C 35 38 73 089499 A 7 0 7 C 31 38 69 089661 T 3 0 3 C 35 38 73 089695 T 2 7 9 G 36 31 67 089915 A 11 0 11 C 27 38 65 090027 A 6 20 26 T 32 18 50 090163 A 0 2 2 C 44 40 84 090578 T 1 6 7 G 43 36 79 091594 G 6 2 8 T 28 36 64 091720 C 20 11 31 T 14 31 45 091721 G 4 0 4 A 30 42 72 091871 T 6 0 6 G 28 42 70 091902 T 1 0 1 C 33 42 75 091954 C 1 0 1 T 33 42 75 092264 T 3 0 3 C 43 42 85 093061 A 1 0 1 G 39 46 85 093203 G 0 3 3 T 46 43 89 093229 T 0 3 3 C 46 43 89 093400 T 1 1 2 A 47 45 92 093428 C 3 0 3 T 45 46 91 093706 T 1 6 7 C 45 38 83 093858 A 9 0 9 T 35 42 77 093967 A 3 0 3 G 35 44 79 094307 A 1 0 1 C 45 44 89 094529 C 7 0 7 A 41 38 79 095524 A 3 0 3 C 35 32 67 095721 T 3 0 3 C 37 34 71 095867 G 4 0 4 C 36 34 70 096107 T 5 0 5 C 33 34 67 096139 A 0 4 4 G 40 30 70 096178 - 11 0 11 + 27 30 57 096296 C 1 0 1 A 37 30 67 096321 C 8 2 10 G 30 28 58 096413 A 4 0 4 C 34 30 64 096568 A 3 0 3 G 45 40 85 096585 + 3 0 3 - 45 38 83 096692 G 2 0 2 T 44 42 86 096767 - 1 0 1 + 45 42 87 096880 T 1 0 1 C 43 42 85 096913 T 10 0 10 C 38 42 80 096922 C 10 0 10 T 38 42 80 096931 C 10 0 10 T 38 40 78 097347 T 5 0 5 C 43 38 81 097427 A 13 0 13 T 35 36 71 098619 A 8 10 18 T 30 32 62 098630 C 8 9 17 T 30 33 63 098633 A 5 5 10 G 33 39 72 098642 T 8 10 18 C 30 34 64 098673 G 8 8 16 A 30 36 66 098905 G 2 8 10 A 36 34 70 098956 T 4 5 9 C 34 37 71 098963 T 4 4 8 C 34 38 72 098984 T 4 4 8 C 34 38 72 098991 T 4 4 8 C 34 38 72 098995 A 4 3 7 T 34 39 73 099020 G 9 4 13 C 29 38 67 099077 C 7 4 11 A 31 36 67 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 021683: ta 022765: ag 024520: T 026098: T 032921: a 036421: t 037902: ata 057038: c 065810: at 073537: ct 074597: gat 076668: t 078062: at 078688: caca 078888: gtct 079196: at 096178: g 096585: gt 096767: gat Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 079749 A 2 0 2 T 21 14 35 G 17 30 47