CEBPB Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

CTCTCTCTGG GCCTCCACTG GCACAATCCG TGGGGGTCCC GTTCTCTCTG 50 | var(40):[T:0.01] ATGTGCAGCC CACAACGTAA GCCTTAGGTT TGGGAGTCTG GTGGGAACAA 100 TGCCACCACC ACTGACAGTA GCGACACCCT TCATGGATTG CAGCTGGGAG 150 | REPEAT AAGTGAAGTG ACTCACCCAA GGTCACACAG TGTGGCAGGG CCGAGCACCC 200 CCCGCCCCTG CCCCATCCCA GGGCCCAGGT CGGGTGGCGC AGCGCGGGGC 250 | var(220):[G:0.13] AAGAGAAGAC CCGGGCGTGT CCAAGCCTCG AGCAGGCGGC AGGTGTGGTG 300 GGCGGGGCTA GGGGCGGGGC TCCGTGGACC AGGGTCCAGC CCCAAGCGGG 350 GCGCGATCCT GCCCGGTCGC GCCGACCCCC GGGGTCCTCA TATTGTCTGT 400 GGCTTAAGAG GGGAGTCGTC ACAGGCGTCA AGTCTTCTTT CTAAAGCCGG 450 GGACCTGGGG AGGAGGTGGG AGTTTACGGG AGGAAGGGCC ACGGAGATGG 500 GTCGCTTCTC CTGGAGCTAG AGCTGCGGGC TGGGGTCTCC AGGGTTCGGC 550 CCGGGGAGCC GACCCTGGTC GGCCGTCGGG GCTCTGCTCG GCCCTCCTGA 600 | var(586):[T:0.24] | var(587):[T:0.26] AACCTCCGCC TCCTCCAGCA GGGGGCGGGC CGGGGCCGCG TCTCGGGGGG 650 AAGGCGATCA GGTCGCCCCC TCCTCCGATT CCCCCGCCTT CCAGGACAGC 700 CTCCAGCCCA GAGGGGCGGT CCGGGGGCGG GGTCGCACCG CCCCCTCTCG 750 CTCCCAATCC CGGGGCGGCC GGGCGGGGGT GGGCAGGGGG CGTGAGGCCG 800 CCCCTGCGTC CCGGGGGCCC CCCGAAAACG CGCTCCGGGT GCCCGGTCCC 850 TCCGCTGCGC CCTGCCGCCG TCCTCCCGGG GGTCTCGGGC GGCCGCGGCC 900 GTGTCCTTCG CGTCCCGGCG GCGCGGCGGG AGGGGCCGGC GTGACGCAGC 950 | NOT SCANNED GGTTGCTACG GGCCGCCCTT ATAAATAACC GGGCTCAGGA GAAACTTTAG 1000 CGAGTCAGAG CCGCGCACGG GACTGGGAAG GGGACCCACC CGAGGGTCCA 1050 GCCACCAGCC CCCTCACTAA TAGCGGCCAC CCCGGCAGCG GCGGCAGCAG 1100 CAGCAGCGAC GCAGCGGCGA CAGCTCAGAG CAGGGAGGCC GCGCCACCTG 1150 CGGGCCGGCC GGAGCGGGCA GCCCCAGGCC CCCTCCCCGG GCACCCGCGT 1200 TCATGCAACG CCTGGTGGCC TGGGACCCAG CATGTCTCCC CCTGCCGCCG 1250 | Exon 1 M Q R L V A W D P A C L P L P P 16 CCGCCGCCTG CCTTTAAATC CATGGAAGTG GCCAACTTCT ACTACGAGGC 1300 P P P A F K S M E V A N F Y Y E A 33 GGACTGCTTG GCTGCTGCGT ACGGCGGCAA GGCGGCCCCC GCGGCGCCCC 1350 D C L A A A Y G G K A A P A A P 49 CCGCGGCCAG ACCCGGGCCG CGCCCCCCCG CCGGCGAGCT GGGCAGCATC 1400 P A A R P G P R P P A G E L G S I 66 GGCGACCACG AGCGCGCCAT CGACTTCAGC CCGTACCTGG AGCCGCTGGG 1450 G D H E R A I D F S P Y L E P L G 83 CGCGCCGCAG GCCCCGGCGC CCGCCACGGC CACGGACACC TTCGAGGCGG 1500 A P Q A P A P A T A T D T F E A 99 CTCCGCCCGC GCCCGCCCCC GCGCCCGCCT CCTCCGGGCA GCACCACGAC 1550 A P P A P A P A P A S S G Q H H D 116 TTCCTCTCCG ACCTCTTCTC CGACGACTAC GGGGGCAAGA ACTGCAAGAA 1600 F L S D L F S D D Y G G K N C K K 133 GCCGGCCGAG TACGGCTACG TGAGCCTGGG GCGCCTGGGG GCCGCCAAGG 1650 | var(1643):[T:0.31] P A E Y G Y V S L G R L G A A K 149 GCGCGCTGCA CCCCGGCTGC TTCGCGCCCC TGCACCCACC GCCCCCGCCG 1700 G A L H P G C F A P L H P P P P P 166 CCGCCGCCGC CCGCCGAGCT CAAGGCGGAG CCGGGCTTCG AGCCCGCGGA 1750 P P P P A E L K A E P G F E P A D 183 CTGCAAGCGG AAGGAGGAGG CCGGGGCGCC GGGCGGCGGC GCAGGCATGG 1800 | var(1785):[A:0.01] C K R K E E A G A P G G G A G M 199 CGGCGGGCTT CCCGTACGCG CTGCGCGCTT ACCTCGGCTA CCAGGCGGTG 1850 A A G F P Y A L R A Y L G Y Q A V 216 CCGAGCGGCA GCAGCGGGAG CCTCTCCACG TCCTCCTCGT CCAGCCCGCC 1900 P S G S S G S L S T S S S S S P P 233 CGGCACGCCG AGCCCCGCTG ACGCCAAGGC GCCCCCGACC GCCTGCTACG 1950 G T P S P A D A K A P P T A C Y 249 CGGGGGCCGC GCCGGCGCCC TCGCAGGTCA AGAGCAAGGC CAAGAAGACC 2000 A G A A P A P S Q V K S K A K K T 266 GTGGACAAGC ACAGCGACGA GTACAAGATC CGGCGCGAGC GCAACAACAT 2050 | NOT SCANNED V D K H S D E Y K I R R E R N N I 283 CGCCGTGCGC AAGAGCCGCG ACAAGGCCAA GATGCGCAAC CTGGAGACGC 2100 A V R K S R D K A K M R N L E T 299 AGCACAAGGT CCTGGAGCTC ACGGCCGAGA ACGAGCGGCT GCAGAAGAAG 2150 Q H K V L E L T A E N E R L Q K K 316 GTGGAGCAGC TGTCGCGCGA GCTCAGCACC CTGCGGAACT TGTTCAAGCA 2200 V E Q L S R E L S T L R N L F K Q 333 GCTGCCCGAG CCCCTGCTCG CCTCCTCCGG CCACTGCTAG CGCGGCCCCC 2250 L P E P L L A S S G H C 345 GCGCGCGTCC CCCTGCCGGC CGGGGCTGAG ACTCCGGGGA GCGCCCGCGC 2300 CCGCGCCCTC GCCCCCGCCC CCGGCGGCGC CGGCAAAACT TTGGCACTGG 2350 GGCACTTGGC AGCGCGGGGA GCCCGTCGGT AATTTTAATA TTTTATTATA 2400 TATATATATC TATATTTTTG TCCAAACCAA CCGCACATGC AGATGGGGCT 2450 CCCGCCCGTG GTGTTATTTA AAGAAGAAAC GTCTATGTGT ACAGATGAAT 2500 GATAAACTCT CTGCTTCTCC CTCTGCCCCT CTCCAGGCGC CGGCGGGCGG 2550 GCCGGTTTCG AAGTTGATGC AATCGGTTTA AACATGGCTG AACGCGTGTG 2600 TACACGGGAC TGACGCAACC CACGTGTAAC TGTCAGCCGG GCCCTGAGTA 2650 ATCGCTTAAA GATGTTCCTA CGGGCTTGTT GCTGTTGATG TTTTGTTTTG 2700 TTTTGTTTTT TGGTCTTTTT TTGTATTATA AAAAATAATC TATTTCTATG 2750 AGAAAAGAGG CGTCTGTATA TTTTGGGAAT CTTTTCCGTT TCAAGCATTA 2800 AGAACACTTT TAATAAACTT TTTTTTGAGA ATGGTTACAA AGCCTTTTGG 2850 GGGCAGTAAT TGGCTTTTGT TTTTTATTTT TTTTACTTTA TTTTGGATTT 2900 | var(2876):[T:0.27] | var(2884):[:0.73] GTAGGATTTT GTTTTTGCGT TTCTGGTGTG TAGGGGGTTG TGTGTGGGGG 2950 | var(2948):[A:0.01] GCTGCTGTTA TTTTTGGAGG TTTTGGTGGT TGGGTGGGGG TGTTGCAGCT 3000 GGTTTTTCTG CCTCCTCTGC TACTCCCCCT CCCACACACA CAGGGTCTGC 3050 TTGAGATGGG GTTCCAGCCC CGGGGGGAAA GGGGAGAAGA GTAATGGGTC 3100 | var(3077):[:0.96] AGGCATTCAG GCTGACTCAG AGCCCCTAGG CGCCGGGACG GGTGGCTGGG 3150 AACCCTGCTT GAGAAGAGAT TCCGGAGCCT CTGGCTGGTC CCGAGTGTCA 3200 GGCTTGGGTT TGGAAGGGCT GGGAGGTCTG TGACCCCTGC CCTGTGTTTG 3250 GGGACTAGGT AGGCAGGCCT GTGACTGTAG GAGGAGGGGG TTCAGGTCTT 3300 | var(3259):[A:0.02] GGTCCTGCTG AGCCCGAGTC AGGGCAGATG CTTTTGGTCA GTGTAGTGGG 3350 GTGGGTTGTT TAAAACACAG TTTGTGTATA CATGTGTATT TTAAAGAGGG 3400 GAGCCTGGGT GTGTGGGCGA GTCTGTGTTT GTGTGTCCCT GGCCAGCAGG 3450 AGGGGAGAGG CCAGGCCAGG TGGAGAGAGG TGGGGGAGGG GTTCCCACAC 3500 TTTGATTACC TTTCCTGAGG ATGGGAGGCT CATCACTTGC TCTCTTTGCC 3550 CAGACTTGGA CACTGAGCCC ACCTCACCTG CCTGCTCAAG GTGGCTGAGC 3600 CCAGGCACAA ACGTGGGGCT GCTAGCCCTG ATTCCCTGGG ACAGGCTCCT 3650 CTTCCCTGCC CACTGATCCC TTTGCCCCTT CCGGCTTCTC ACCGCACCCC 3700 | var(3693):[T:0.28] CTACTCCCAT CCAGCCCTGG ATGGCATTCC TGAGAGTTGA GGATGTAGAT 3750 | REPEAT GGATGTGAGT GGATACATGT ACAGCGTCCC ACAGTGCCTG GCACGCAAGA 3800 AGTGTTATAT AAGCGCTTGC TCTTGTTATT ATTTTTTGCT GGGAAGCTGC 3850 TGGCATTTGG CACCCCAGTC TCCAGTGCAG CGCCAGTGTG GCCAGTACTT 3900 | REPEAT GCCAGGGGCC GGCATCTGGT AAACACTGGA CCTGCCCCAT CCCATTTAGA 3950 CCTCACAATA ACCTTTGGGA AGGTGGGGAT TGTTATGACG CCTGTTTTTA 4000 GAGGTGGGGA GCAGCTTTGG GCTGTCCGAT CCCTATGGGC AAGACACTGG 4050 TTGGGGGTTG CCCTGCCCTG AGGAATTCAG GGGCAGCAGG CATCGTAGCC 4100 TGGTTTGCCA AGGACCTGGG GCGGTCTGGG ATCTCAGGAG CAGTTGCTGA 4150 TACCGTGGTT CGCGAATGGG AAATGCTTTG CCCCTCCTTT TCCTTTTGGG 4200 GGCCTGGTTG TGCTTTCCCT GTGGGAGCCT GGGATGTGGG GAACAGACAG 4250 CGACACTCAT CCCCCACCGC CACAAAGCGG AGGATTCCTA TAAGCTCCAC 4300 CTCCCTAATG CCAGTGTCTC CTGATGGTGG CTCGAGGGCT ATGCAGATTG 4350 CTGGACACAG ATAACCTCAC TTCAACCTGG GACCTGCAGC GTGGCCCTGA 4400 CCACGTCCCC TCCCAGCCCT GGGCAACTGG ACAACTGGCC GGGCATGCCT 4450 | var(4446):[C:0.28] TCAAAGCCTC GAAGTCAGTT CAGTCCCAAG CCCCACTGGT CTCGATGGTT 4500 TCTGTCAGTA GCAGCGACAG CAATGTGGGC TTGACCTCAA GGATTTACTT 4550 GCTGAAGGCA GAGGCTGAGG GGCTGGACCT AGGGAAGGAG GGAGGTGGAG 4600 AGGGTCGAAA TTGAGGAACA AATCTCAAAT CCCTGCTCCC TCCTTTGTCA 4650 CCAAGAGTTG GCTGGTGGCC ACTGCTCACC CAAATGAGGT GAGAGGGAAG 4700 CAGCCTGGCC AGACGGTGCC CCTCTTCCGC CCCCGTCTGC CCCACAGCTT 4750 CGCTTCTGTT TCCCCAGTGC TGTCCTGGAA CCAGCGTTGA GTCAGTTCTT 4800 CACACACTCA CATCTTGCTC TCATCCACAG TACCCCACAG AAGGTGCTAG 4850 ACCCATTTCT AAAAGCACAC ATTGAGGTCC ACAGAAGTGA GGTTTGTGCT 4900 CAAGGTGGGC TAGGTGGAGC AGGTTACAAA ACCATCCGAC TCCCAAGTCT 4950 ATGGGGAAAG TTTGGGGCTG GGAGCCTGGT TTGTAATCCC AGTTCCTGTT 5000 | var(4962):[C:0.03] TAAAATCCCA GGCTCTTCTT GGAGGGCTCC TTGCCTGACC TCAAGTTCAG 5050 | var(5010):[G:0.01] GCACTCCAAG CCCCAGAACT GCAAACATCA GTTTCA