Site      Genotype1 AD-pop    ED-pop    Total-pop Genotype2 AD-pop    ED-pop    Total-pop Genotype3 AD-pop    ED-pop    Total-pop AD-chi2   ED-chi2   Total-chi2
000059    GG        20        23        43        GT        2         0         2         TT        0         0         0         0.050     0.000     0.023     
000067    CC        9         17        26        CT        12        5         17        TT        1         1         2         1.455     0.571     0.141     
000201    AA        0         0         0         AG        2         0         2         GG        21        23        44        0.048     0.000     0.023     
000257    CC        22        23        45        CG        1         0         1         GG        0         0         0         0.011     0.000     0.006     
001618    AA        0         0         0         AG        2         0         2         GG        22        23        45        0.045     0.000     0.022     
001662    GG        0         0         0         GT        0         1         1         TT        24        22        46        0.000     0.011     0.005     
001739    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
001747    GG        23        23        46        GT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
001861    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
001878    CC        20        22        42        CT        3         0         3         TT        1         0         1         2.617     0.000     6.146     
001949    AA        0         0         0         AC        1         0         1         CC        23        22        45        0.011     0.000     0.006     
002677    GG        9         11        20        GT        4         5         9         TT        0         1         1         0.430     0.172     0.000     
003084    GG        23        23        46        GT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
003133    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
003501    AA        9         16        25        AG        9         4         13        GG        4         1         5         0.414     1.037     2.244     
003779    CC        10        17        27        CG        12        5         17        GG        2         1         3         0.375     0.571     0.022     
003901    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
004181    CC        9         16        25        CT        11        5         16        TT        2         1         3         0.279     0.499     0.040     
004191    GG        0         0         0         GT        1         0         1         TT        21        22        43        0.012     0.000     0.006     
004280    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
004673    CC        2         1         3         CT        12        5         17        TT        10        17        27        0.375     0.571     0.022     
004752    CC        22        18        40        CT        0         4         4         TT        0         1         1         0.000     1.252     3.673     
004772    GG        10        17        27        GT        10        5         15        TT        2         1         3         0.050     0.571     0.210     
005114    AA        10        17        27        AG        12        4         16        GG        2         1         3         0.375     1.144     0.090     
005265    CC        23        22        45        CT        1         0         1         TT        0         0         0         0.011     0.000     0.006     
005380    AA        0         0         0         AG        0         1         1         GG        24        21        45        0.000     0.012     0.006     
005399    AA        0         0         0         AG        0         1         1         GG        24        21        45        0.000     0.012     0.006     
005407    CC        10        17        27        CT        12        4         16        TT        2         1         3         0.375     1.144     0.090     
005629    AA        1         0         1         AG        11        4         15        GG        10        16        26        0.889     0.247     0.474     
005700    AA        1         0         1         AC        11        4         15        CC        10        16        26        0.889     0.247     0.474     
005840    --        10        15        25        +-        12        5         17        ++        2         1         3         0.375     0.429     0.002     
005874    CC        11        18        29        CT        0         0         0         TT        1         0         1         12.000    0.000     30.000    
005912    CC        4         4         8         CT        1         8         9         TT        7         6         13        8.113     0.180     4.397     
006058    AA        2         1         3         AG        0         0         0         GG        10        17        27        12.000    18.000    30.000    
006091    CC        22        23        45        CT        2         0         2         TT        0         0         0         0.045     0.000     0.022     

Note:

AD: African_Descent
ED: European_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

005840: G