CEBPA Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

ATGTACAGTG GCGTTTCTTT GTTCCTAGGT AGGAAAAGCC ATTAGTTTTA 50 GCACCGCAGA AAAAAACGCA AATCGCTCTT GGTGCTTTTT GATTTCCGTC 100 | var(59):[T:0.02] | var(67):[T:0.23] CAGGTCTCCC TCCACAGGTG AATGCTATAT GAATGGGTCC TGCATTTGGC 150 TCAGCAAGCA GCTCTCCGGC TCACATCGGG ATATTTATTT AACGTATCTG 200 GTTTTTACTC CCTCCCGTCC AAAAGCGTCA AGCTAAAAAT ATCTTGTTTA 250 | var(201):[A:0.02] TGAGCTCTGG ACCGAAAACG AAGCAGTTGG GCTATTAATC ACTGGGACTA 300 | var(257):[G:0.01] TGTTGAATAG GAACTTGATT AAAGCGCAGT GTGCGTTGCC CAGATGAAAC 350 TGCTTCTTTA CTGCGATCGT CGTGGAAGCT CGGGGCTCTC CAGCGGTGTT 400 TTTAGCTGTG CCCCCTCCGG GGCTCCTGGG CGGGTCGTGG CGCCTTGCCA 450 GGCCTAAGGC CACTGTCGGT GAAGGGGGTC TTCCCTCACC TGTAGGCAAG 500 CGCGCCTCTA GCCGGGACGC AGGCGGCGTC AGGCCTCAGC GCCAGTGGCG 550 AGGGGCGGCG CGGGCAAGGA CAGGAGACAC TTGAGGGCTC CCAAGACTCC 600 | NOT SCANNED ATCTGGGCCC AGCTGACGGT CCGTAGCCGC CACCCCGGCC CCGGTAAAGA 650 ATGCGAGGGA CGCACGTGGC TGGGGGTCTC GGTGGCAAGC TCCTTCCCCC 700 GCCGCGGTGA GAGCATTAGC TGCCGCACTC AAGGGGCCCC AGGGCCTGGC 750 CGCCTCGGTC CCTAGGATCC CGGGGACTAC AGCGCCCGGC GAACCACTGG 800 GCAGAGTTCT CCCTGTGCGT GCTCGGACCT GGCAGCCCGG CGGCCTGGAC 850 ACCCTCGCTC CCGCCGTTGG CGCCCACCTG AATGGGGAGG CGGGGGAGGA 900 AGCGGTGGCT TCGGGCCTCG AGGGCTGCGG CCCCCGCCTC GGAATCCCGG 950 CCCCAGAGTT AAGTTTGTCT CCTCCCTCGG TGCGCCCCTC CCCGTGCTCG 1000 CCCCGGCGTC CAGCTCCGCT AGTCTGGGGG GCCCCGCGGT CCCGCAGGAA 1050 AAAAAATCGG CGACTCCACG CCGGGTAACA GCGCCGGCCC CGCGCGCCTA 1100 GCAAGCCGCG CGCTCCGACC TGGAGAAGTA ATTATAAAGA AAGTTTTCCA 1150 GCCCGGGCGG ATCGACCGGC CAGGTCCTCC AGGCTCCCGG GCCGAGGCCG 1200 CCTCCGCTCC CCGCGGGGTC CTAGCGCCCT GCGCGGCGCC GCCCATGGGA 1250 CCCCGGCGTC CTCCGAGAGG TACCTCTGCG CGGAATCACA GGGGTAGCCT 1300 GGAGATCAGA GCTAGGAGAC GCAGAGCCAC CGCGCTCAGG ACCTCTCCGC 1350 GCGTCCCAAA CGGCCCCCCA CCGGCCCCAG CCCCGCTGCT CTGCGCTGCA 1400 GCCTCCCCGG GACGCGGGTC CGGGACAGGC CTGGTTCTGG CTTTGAAAGA 1450 GAATCCGCGC CCCAGCAGCT CAAGACCAAG ACTCGCCCTC CGCCCCCCAC 1500 CCCTACCCCG TGCAGCCTCG GGATACTCCT GGGCTCCCGG CCGTGGCTGG 1550 ATACGGGCGC CTAGGGCAGG CAGGAGGAGG GGGCCCCCGC TACCGACCAC 1600 GTGGGCGCGG GGGCGACGGC CGGGCCGGGG GCGGAGCTTG GAGCGAGCGC 1650 | var(1618):[A:0.02] CGCGGCTCTG CTGGGCGCGC TGGAGGCGGT GGGCGTTGCG CCGCGGCCTG 1700 | var(1662):[G:0.01] CCTGGGGAGC GCGGCGCTGT GCCGCGCTGG TTCGCCGCCC CATGCCGGCC 1750 | var(1739):[T:0.01] | var(1747):[T:0.01] GCGCGCTAGG ACCCAGCAGG CGCCGCGCCG CCGCAGCCCG GGGACAGAGG 1800 CCGCCTCGGA CTCTAGGGGG CGACGCGGCC TGCCGGGTAT AAAAGCTGGG 1850 CCGGCGCGGG CCGGGCCATT CGCGACCCGG AGGTGCGCGG GCGCGGGCGA 1900 | var(1861):[T:0.01] | var(1878):[T:0.05] GCAGGGTCTC CGGGTGGGCG GCGGCGACGC CCCGCGCAGG CTGGAGGCCG 1950 | var(1949):[A:0.01] CCGAGGCTCG CCATGCCGGG AGAACTCTAA CTCCCCCATG GAGTCGGCCG 2000 | Exon 1 M E S A 4 ACTTCTACGA GGCGGAGCCG CGGCCCCCGA TGAGCAGCCA CCTGCAGAGC 2050 D F Y E A E P R P P M S S H L Q S 21 CCCCCGCACG CGCCCAGCAG CGCCGCCTTC GGCTTTCCCC GGGGCGCGGG 2100 P P H A P S S A A F G F P R G A G 38 CCCCGCGCAG CCTCCCGCCC CACCTGCCGC CCCGGAGCCG CTGGGCGGCA 2150 P A Q P P A P P A A P E P L G G 54 TCTGCGAGCA CGAGACGTCC ATCGACATCA GCGCCTACAT CGACCCGGCC 2200 I C E H E T S I D I S A Y I D P A 71 GCCTTCAACG ACGAGTTCCT GGCCGACCTG TTCCAGCACA GCCGGCAGCA 2250 A F N D E F L A D L F Q H S R Q Q 88 GGAGAAGGCC AAGGCGGCCG TGGGCCCCAC GGGCGGCGGC GGCGGCGGCG 2300 E K A K A A V G P T G G G G G G 104 ACTTTGACTA CCCGGGCGCG CCCGCGGGCC CCGGCGGCGC CGTCATGCCC 2350 D F D Y P G A P A G P G G A V M P 121 GGGGGAGCGC ACGGGCCCCC GCCCGGCTAC GGCTGCGCGG CCGCCGGCTA 2400 G G A H G P P P G Y G C A A A G Y 138 CCTGGACGGC AGGCTGGAGC CCCTGTACGA GCGCGTCGGG GCGCCGGCGC 2450 L D G R L E P L Y E R V G A P A 154 TGCGGCCGCT GGTGATCAAG CAGGAGCCCC GCGAGGAGGA TGAAGCCAAG 2500 L R P L V I K Q E P R E E D E A K 171 CAGCTGGCGC TGGCCGGCCT CTTCCCTTAC CAGCCGCCGC CGCCGCCGCC 2550 Q L A L A G L F P Y Q P P P P P P 188 GCCCTCGCAC CCGCACCCGC ACCCGCCGCC CGCGCACCTG GCCGCCCCGC 2600 P S H P H P H P P P A H L A A P 204 ACCTGCAGTT CCAGATCGCG CACTGCGGCC AGACCACCAT GCACCTGCAG 2650 H L Q F Q I A H C G Q T T M H L Q 221 CCCGGTCACC CCACGCCGCC GCCCACGCCC GTGCCCAGCC CGCACCCCGC 2700 | var(2677):[T:0.18] P G H P T P P P T P V P S P H P A 238 GCCCGCGCTC GGTGCCGCCG GCCTGCCGGG CCCTGGCAGC GCGCTCAAGG 2750 P A L G A A G L P G P G S A L K 254 GGCTGGGCGC CGCGCACCCC GACCTCCGCG CGAGTGGCGG CAGCGGCGCG 2800 G L G A A H P D L R A S G G S G A 271 GGCAAGGCCA AGAAGTCGGT GGACAAGAAC AGCAACGAGT ACCGGGTGCG 2850 G K A K K S V D K N S N E Y R V R 288 GCGCGAGCGC AACAACATCG CGGTGCGCAA GAGCCGCGAC AAGGCCAAGC 2900 R E R N N I A V R K S R D K A K 304 AGCGCAACGT GGAGACGCAG CAGAAGGTGC TGGAGCTGAC CAGTGACAAT 2950 Q R N V E T Q Q K V L E L T S D N 321 GACCGCCTGC GCAAGCGGGT GGAACAGCTG AGCCGCGAAC TGGACACGCT 3000 D R L R K R V E Q L S R E L D T L 338 GCGGGGCATC TTCCGCCAGC TGCCAGAGAG CTCCTTGGTC AAGGCCATGG 3050 R G I F R Q L P E S S L V K A M 354 GCAACTGCGC GTGAGGCGCG CGGCTGTGGG ACCGCCCTGG GCCAGCCTCC 3100 | UTR | var(3084):[T:0.01] G N C A 358 GGCGGGGACC CAGGGAGTGG TTTGGGGTCG CCGGATCTCG AGGCTTGCCC 3150 | var(3133):[A:0.01] GAGCCGTGCG AGCCAGGACT AGGAGATTCC GGTGCCTCCT GAAAGCCTGG 3200 CCTGCTCCGC GTGTCCCCTC CCTTCCTCTG CGCCGGACTT GGTGCGTCTA 3250 AGATGAGGGG GCCAGGCGGT GGCTTCTCCC TGCGAGGAGG GGAGAATTCT 3300 TGGGGCTGAG CTGGGAGCCC GGCAACTCTA GTATTTAGGA TAACCTTGTG 3350 CCTTGGAAAT GCAAACTCAC CGCTCCAATG CCTACTGAGT AGGGGGAGCA 3400 AATCGTGCCT TGTCATTTTA TTTGGAGGTT TCCTGCCTCC TTCCCGAGGC 3450 TACAGCAGAC CCCCATGAGA GAAGGAGGGG AGCAGGCCCG TGGCAGGAGG 3500 AGGGCTCAGG GAGCTGAGAT CCCGACAAGC CCGCCAGCCC CAGCCGCTCC 3550 | var(3501):[G:0.27] TCCACGCCTG TCCTTAGAAA GGGGTGGAAA CATAGGGACT TGGGGCTTGG 3600 AACCTAAGGT TGTTCCCCTA GTTCTACATG AAGGTGGAGG GTCTCTAGTT 3650 CCACGCCTCT CCCACCTCCC TCCGCACACA CCCCACCCCA GCCTGCTATA 3700 GGCTGGGCTT CCCCTTGGGG CGGAACTCAC TGCGATGGGG GTCACCAGGT 3750 GACCAGTGGG AGCCCCCACC CCGAGTCACA CCAGAAAGCT AGGTCGTGGG 3800 | var(3779):[G:0.24] TCAGCTCTGA GGATGTATAC CCCTGGTGGG AGAGGGAGAC CTAGAGATCT 3850 | REPEAT GGCTGTGGGG CGGGCATGGG GGGTGAAGGG CCACTGGGAC CCTCAGCCTT 3900 GTTTGTACTG TATGCCTTCA GCATTGCCTA GGAACACGAA GCACGATCAG 3950 | var(3901):[A:0.01] TCCATCCCAG AGGGACCGGA GTTATGACAA GCTTTCCAAA TATTTTGCTT 4000 TATCAGCCGA TATCAACACT TGTATCTGGC CTCTGTGCCC CAGCAGTGCC 4050 TTGTGCAATG TGAATGTGCG CGTCTCTGCT AAACCACCAT TTTATTTGGT 4100 TTTTGTTTTG TTTTGGTTTT GCTCGGATAC TTGCCAAAAT GAGACTCTCC 4150 GTCGGCAGCT GGGGGAAGGG TCTGAGACTC CCTTTCCTTT TGGTTTTGGG 4200 | var(4181):[T:0.25] | var(4191):[G:0.01] ATTACTTTTG ATCCTGGGGG ACCAATGAGG TGAGGGGGGT TCTCCTTTGC 4250 CCTCAGCTTT CCCCAGCCCC TCCGGCCTGG GCTGCCCACA AGGCTTGTCC 4300 | var(4280):[A:0.01] CCCAGAGGCC CTGGCTCCTG GTCGGGAAGG GAGGTGGCCT CCCGCCAACG 4350 CATCACTGGG GCTGGGAGCA GGGAAGGACG GCTTGGTTCT CTTCTTTTGG 4400 GGAGAACGTA GAGTCTCACT CTAGATGTTT TATGTATTAT ATCTATAATA 4450 TAAACATATC AAAGTCAATG TCGGTGTCTT TTTAAAACCA GAAAGAAGCT 4500 ACTTCCAAGG TTGTCTGTGG GCCAGGTCAC ATTTGTAAAT AATACAGCAT 4550 TTTCCCTGGC GGCAATCCTG ACTTTCATGA GCTCTCCATC CATCCTGAGC 4600 CCCTCTTACC CTAAGGGGGT GACTTACTTC CCCCAGGCAA GACAAATAAA 4650 TAGCAGAGGA CAAGGCTCCA AATGGAGTAT GTCCAGAGCC TGAAGGCAGT 4700 | var(4673):[C:0.24] CTCTTGGGGT CAGGGGAGGG GGCTGAAGGG GTTACTGGGC TGAGGCCTTG 4750 GCGAGGCTTC TTATCTGCCC CGGGGAGGAG GAGAGGGAGT CCTCTGCCTG 4800 | var(4752):[T:0.07] | var(4772):[T:0.23] | NOT SCANNED AGGGGTAGGC CTGGCTAAGC AGCCCTAGGC TCAAGGAGCC CTTTGTGCAG 4850 ACTTCCTTGC AAATCACCTA CAGCTGCAGC CCTGGCCACT CACACACACC 4900 GCAGCTCCAG ATTCCAGCAG GACCCTCGGC CAGCAGGAAG AGGCCTCCAG 4950 TGGTAGGACC CTCCAACCCT CTCCTCTTTC CCTAGACCAT GTGGCTACAC 5000 CCTACCCCTG CGAGGCCCGA AGGCAGCCTG AAGAGAGAGA CCCCTCCATC 5050 CAGCCCTCCA CACCTGCCCA GCCCCAGCCC TCACAAGAAA GGGGGCTGAG 5100 GCAGGCCTGC AACAGGGGTC TGGTCCTGCC CCACACACTG GCTGTTCAAG 5150 | var(5114):[G:0.24] AACCCACCCA GCATCCACAC TCCCCACTGC ATTCATCCCA GACCCAGCAG 5200 GGGACTGAGT GCTGGTGTGC CCCCAACTCC AATGAGCACC CTGTAAGGTC 5250 AGGCACTCCG GCACCCCCTT AGCAGCAGTG ACAGCCAAGC AAGGGAGGGC 5300 | var(5265):[T:0.01] AGCCCTTATC CCTGAACTAA CAAGGCCCGG GAGAAAGAGG CCCAGGAGGC 5350 TGATGGTGCT TTTCAGATTT TACCCTCACG GAGGGTAAAA GATAAATTGC 5400 | var(5380):[A:0.01] | var(5399):[A:0.01] ACTTTTCTTT TTTTTTTAAC TCTGTACCGA GAGAATGTTC ACTGAGTGGC 5450 | var(5407):[T:0.24] TTACTGTGTG TACCAATGCG GGCTGGGGCA TTTTCGAGAA ATTACACATT 5500 CCTTTTACAC TCTGGAAGCT TAGCTTTACC TGCCTGCGTG GTTAGCTGGC 5550 ACCCCTTCCG GCCCCCCACT CTGTCCTGTG TCTGGCCGCC TCCTCACCCA 5600 CGGCCGCCCT TGGCAGAGGA GAGGCCACGA GCCCAGTGAG GAGGCGGCGC 5650 | var(5629):[A:0.20] CTGCCCCGCC ACCCTGGGAA CAGAGGAGGC AGAGCCCCGC CGCGTGCCCC 5700 | var(5700):[A:0.20] GAGGCCTGGG GCAGGTCGCA GCTTGCTAAG CCCCAGCAAA CCCTCTGAGT 5750 TCAGTGCTAA TTCCAGTTTT TCTTGTTTGA GGGGGCTGAT CCCTGGCTTC 5800 CCCCTTTCCC CCCAGAACAG GTCCTAGGAC GGGAGGGGGG TGGGGCGACC 5850 | var(5840):[:0.74] CTCCTGCCCT CACTCCTTCC CCTCCTCTCT GCTGTGCCAG CCCGCTAGGG 5900 | var(5874):[T:0.03] GCTTCCTCTT TTAAAGCTGA TGGCTCCCGG AAGGGATCCC TCCTACCCCG 5950 | var(5912):[C:0.42] AGTCCTCCTC CTGGTCCTGA GTTCCAGGGT GGGCTTTGTT AGGGACAAGA 6000 AGGATCCAAT CACATCCAGC CCCAGGAAAG GGATGAGGAG GGCGAGGCCC 6050 CCGGGGGGGG CCAAAGTAGA GGGGAGGAAG GTCTTTTGGG CGGCATGGGG 6100 | var(6058):[A:0.10] | var(6091):[T:0.02] TGAACCTGCC CAGCATGTAC CCCGTGTCCA GCTGTAGGGG CTTCCCGGGA 6150 ACAGAGTCAC CCTTGGCCAC CCACCGCTTC CTGCAGGGTT CCTCACAGTT 6200 CCCCTCCTGA CTACAGCCTT CAGGAAGAAC CATTCCAAGA GCCCAGCACT 6250 GAACACACCT CAAGTATTTA TCAGATGCCT ACTGTATGCC AGG