CEACAM1 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of GeneSNPs

AGCCTCTGGT ATGCTCTGTT CTACTTTTTC CTTCCATGAG ATCAACTGTT 50 | REPEAT
TTTAGGTTCC ACATATTAGT AAGAACATGT GATGTTTAAC TTTCTGTTCC 100
TAGCCCACTT CCATTCATGT TGCCACATGT GACAGGATTT CATTCTCAAG 150
CCCCCAAAGG CACCTCACTG GGCCTTTGTT TTTTTGTTTT GTTTTGTTTT 200
TGCTTTTGTT TTTCAAACCT CTGGGACAGA TGGCTCCTTC TAAGGCAGCC 250 | REPEAT
CATCCCCCTG GTGGACAGTT CTCTCCAATC TTGACAGAAG TCCTCTGGAC 300
AACTCACGTC CTCTCCCTGG GCTCATCCTG CACCGCATGG AGCTGGGCAG 350
CCTGGGGACC CGCAGTGAAC AGGACCTGGG GTGACTTGAC CTTGAAGCCT 400
GGAGGTCAGA GCCCACATCT GCCCAGGGGT CAGGGCCAGC TCACATCATG 450
TAGACCCTGG TCAGCATCCC TGGGGCAGCC CTTGACAAGG CTGCAGGCCT 500
TGTCTTGCCC TCCAGGGGGA GACATTGCAC ACAGACAACA CTCAGGAAAC 550 | var(507):[C:0.02]
ATTCCCCTGG TCATGAACCT GGCTTTGCTA AGGAGGTGAA GGTAGAGCCC 600
ACTTTCCATC CCTTGCTCCA AAACACCCTT CCAGGCCCTC CCATGTACCT 650
GCTCTGTCCC TTCCTGGGTC CTCTGAGGAC CCTGTTCTGT GAGGGGTCCC 700
TGTGCAGCTC CCCATTCCCT CCTGGCACCA CCTGTGGGGA AGGTGCGGTG 750 | var(746):[T:0.02]
ACCACAGGAC AATCAGCCTC GCAGAGGACA GAGACCACCC AGGATGGTCA 800
GGGAGAACAT GGACAGGCCT TGAGCCTCAG CTCAAGGGAG GGAGGGTCCC 850 | var(811):[A:0.05] | var(815):[C:0.01]
CCTGAAGTCT TCCCCAAGGA CAGTAGAGCC CAGAGCCACC CACCTCCCTC 900 | var(858):[C:0.23]
TATCACAGTC CTCTCTTCCC AGGACACACA GGACACCTCC CCCTCCATAT 950
CCGGGAGCTG CAGCTCCACC TGAGACCCCT GGACTTGGGT CTCTGTCCCT 1000 | var(953):[A:0.02]
GGGTTAGAGG CCAGGCTGGT GACACTAGAG ACAGAGGGCT GGTCCCTCCC 1050
CAGTCATCCC CCAGTGAGCC CCTTTCCATC CCCCAGAGCC ACCTCTGTCA 1100
CCTTCCTGCT GGGTGTCTTC CTACCTTCCC AGCACACTGA AGAGCATGGG 1150
GAGACCTGGC AGCTCACTGT GTTGCAAAGA AAATAATTAC CACATTTGGA 1200 | var(1177):[G:0.01]
TATGCCAGGG TTCTCTGTGT GCTGCTGACA GACCCATAGC CAGGACACAA 1250 | var(1243):[A:0.23]
TAGAGGTCAG TGCTGGAGAG GGGGGATCCT CCTCCCCTGA TGGGGACAGA 1300
GGTCTCATCA GCCTTGATTC TCAAAGTGTG GTCTGGGAAA CCAAAATGTA 1350
GACAGAAAGG AAAGAGAAAG TAAGGACAAA GGTAGGAATG AGAGGAGAGG 1400
AAACAGAGCT TCCTGGACAA ACCCCGCCCC AGCACACATG ATCAGACAAA 1450 | var(1426):[A:0.01]
GCTCTGGGCC CCAGGGAGGA GGCTCAGCAC AGAGAGTGGA AAACAGCAGA 1500 | Exon 1 | UTR | var(1485):[G:0.40]
GGTGACAGAG CAGCCGTGCT CGAAGCGTTC CTGGAGCCCA AGCTCTCCTC 1550 | var(1502):[C:0.02] | var(1548):[T:0.38]
CACAGGTGAA GACAGGGCCA GCAGGAGACA CCA
TGGGGCA CCTCTCAGCC 1600
                                    M  G  H   L  S  A  6
CCACTTCACA GAGTGCGTGT ACCCTGGCAG GGGCTTCTGC TCACAGGTGA 1650
 P  L  H   R  V  R  V   P  W  Q   G  L  L   L  T       21
GGGGAGGACA CCCTGGGAAG GGGCGGAAAG AGGGCGCACA GAGAATGGCT 1700
AGGGTCCTCT GGGGAGGATG GAGCTCTAAG AGGGGACAGA GGGCTTCTCT 1750
TGGAGCCAAA TAGGAGAGAG GACATGAAAG GGATAGAGAT CATAAAAGGA 1800
AAGTCTCAGT GATCTGAAAC TGTTAGTGAA TAAACAATCT CCCATTTTTT 1850
ACCTTTTCCA ACTGAATCAT CAATGAGCAA TAAATTTCAA AAACTGCTGA 1900
CAATAATCAC AATTTAAGTC AGCGTGACAA TTAAGGAAAA CATTTTAAAA 1950
GGGGCATTAA ACAGAGCCCT GAGCCACCAA CCTCAGATAT TGGCAAATAA 2000
ACCCCAGGAC ATGAAGAGCC CTGGGAATGC TCACTAACTC ATCCACAGGA 2050
GTCTGCAGCC TATCCCAGGC ACTGGGGTGC AACCAACATC ACACAAATCC 2100 | REPEAT
CTGCCCTCAC GGAGCTCACG CTCTCATGGG TGGGGAAGAC AGACAAGCAA 2150
AGAGATCTAG AATGTGAGGT CAGGTGTTGA CAAGAGCCCT GGAGGGAACA 2200
GAGCAGAAAA AGGTCAGAAA GGGAATACCC AGGGTCTCTA GGGGAGGTGT 2250 | var(2202):[:0.06] | var(2227):[G:0.01]
CAGGGAAAGG ATCTCCCAAG AGCACCCTGA TGTGATCAAG ATCTGAGGGC 2300 | var(2277):[T:0.01]
AGTGGGGAGG GAGCCATGCG GATCCCTGGG GAAGGGCATT CCAGAGAAAT 2350
GACAAGGTCA GAGGCACTAA GGGAATGGGA GTCACACTGC TGACCTTGAC 2400
CCAGTAGGAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC 2450
ACTCCAAGGT GGAGGGGTGA AGACACCTGC TCAGGACCCA AGGCCCCATT 2500
TTTCTACCCT AATGCATAGG TCCCAATATT GACTGATGCT CTCTCCTCTC 2550 | var(2511):[:0.01]
TCCTAGCCTC ACTTCTAACC TTCTGGAACC CGCCCACCAC TGCCCAGCTC 2600 | Exon 2 | var(2595):[A:0.24]
      A  S   L  L  T   F  W  N   P  P  T  T   A  Q  L  36
ACTACTGAAT CCATGCCATT CAATGTTGCA GAGGGGAAGG AGGTTCTTCT 2650
 T  T  E   S  M  P  F   N  V  A   E  G  K   E  V  L  L 53
CCTTGTCCAC AATCTGCCCC AGCAACTTTT TGGCTACAGC TGGTACAAAG 2700
  L  V  H   N  L  P   Q  Q  L  F   G  Y  S   W  Y  K   69
GGGAAAGAGT GGATGGCAAC CGTCAAATTG TAGGATATGC AATAGGAACT 2750 | var(2711):[A:0.01] | var(2740):[T:0.23]
G  E  R  V   D  G  N   R  Q  I   V  G  Y  A   I  G  T  86
CAACAAGCTA CCCCAGGGCC CGCAAACAGC GGTCGAGAGA CAATATACCC 2800
 Q  Q  A   T  P  G  P   A  N  S   G  R  E   T  I  Y  P 103
CAATGCATCC CTGCTGATCC AGAACGTCAC CCAGAATGAC ACAGGATTCT 2850
  N  A  S   L  L  I   Q  N  V  T   Q  N  D   T  G  F   119
ACACCCTACA AGTCATAAAG TCAGATCTTG TGAATGAAGA AGCAACTGGA 2900 | var(2861):[C:0.23]
Y  T  L  Q   V  I  K   S  D  L   V  N  E  E   A  T  G  136
CAGTTCCATG TATACCGTGA GTATTTCCCC ATGACCTCTG GGTGTTGGGG 2950
 Q  F  H   V  Y                                        141
GGGTTAGTTC TACTTCCCAC ACATGGGATT GTCAGGCCTG GGCTGTGCCT 3000 | var(2953):[:0.99]
GTGTCCTCCT CTGCATTATA CCCCATGTTA AGGTTTGAGC ATCTAGTGCA 3050
GGACACACTA TGGGACAGAC ATCAAAATAC CGAATGTCTT ACTCTGGAGT 3100
CCTGATCCTG CAGACATTTG CTTCAGAGGA AGGACAATCT GATGTGGGTA 3150
ACTTATCGAG GGGAGACCAG TCTCAATCTA GCCCCCCGGG ACCCTCCTGG 3200
TGAACATGTC CCTAAGAAAG ACCCAGTAGG ACTCAGTCAG GGTCTGGCCT 3250
GAAGGGCCTT CTGGGATCCT CACAGACAAG CTCAGCCCTG GGAATCCCCT 3300 | var(3291):[C:0.03]
GCTCCAAAAC ACTATCCCAA GGTTCTCAAC TCCTGGTGAC CCTGAGGAGC 3350
CTGGGCCAGG GCTAGATTGT GGCCTCCTGG GCAGGGCTGA CTAGGAACAA 3400 | var(3376):[T:0.02]
GAATTTGAGC TATCCGAGGG CTGTGGCTCC TGGAGCTGGT AACCAGCCAG 3450
GGTTCAGGCA CTAGAGCCTC ATTTGGGCAA GGATGGAGCC TCATCCTTCA 3500
CCTTAGTCTC AGCCTGGAGA GGACAGATGG ACAAGCTCCC CAGGCCATCA 3550
GCCAACTGCC CTGGGGGCTT AGGAGATGCC ATAGGAAGTT TACCATCCCC 3600 | var(3594):[T:0.10] | var(3597):[A:0.01]
AGGAGGAGGA ACAGAGGAGA CAGGATGCTC CTGAAAGCTC CTTGTCCACC 3650
AGGGATCAGG CTGAGAGGCA CTCTCAGGGA ATCCAACAAC AATAGATGCT 3700 | var(3690):[T:0.35]
GCGGCCGGGA GCGGTGGCTC ACGCCTGTAA TCCCAGTACT TTGGGAGGCC 3750 | REPEAT | var(3718):[T:0.08]
GAGGTGGATG GACTATGAGG TCAGGAGTTC AAGACCAGCC TGACCAACAT 3800 | var(3751):[A:0.20]
GGTGAAATGC CGTCTCTACT AAAAATACAA AAAAATTAGC CGGGCATGGT 3850
GGTGCGTGCC TGTAATCCCA GCTACTCAGG AGGCTGAGGC AGGAGAATTG 3900
CTTGAACCTG GGAGGCAGAG GTTGCAGTGA GCCAAGATCA CACCACTGCA 3950
CCCTAGCCTG GGTGACAGAG CGAGACTCCA TCTCAAAAAA ATAAAATAAA 4000 | NOT SCANNED
ATAA
GATTGT TTATTTGGGC AGCTCCCCTA TGCAGAGCTG AGGTCAAATA 4050
ATTATAAATA TTTTAAGGTT AATTCACAGA CCACAAGATA AGCCAAAACC 4100 | REPEAT
ATTAACCATT TATACTATTT CACTGAGGGG AAACTGAGCC ACATGGCAAT 4150
AAATACAGTC ACTATATCAA GGTCA
CACAG ACCGTAACTG GAAGATCAGT 4200
TACAGGAGAT TTGTCTTCAG CCACAGTCTT AACCTCTCCT CTACTCCAGG 4250
GGCCTTATTT GGCATCTGTG GACCCCAATA CCAGAGTTGG TTCAGTTCCT 4300
TTCTTCTTAG GCATCTGCAG CCCAGAGGGG AGATCCTGGT CTGGGGAGTG 4350
AGATCAAATG GAGAATTAAC CAAGTTTTAT TCTGGAACTT ATTCAACAAT 4400
TAGAGTCAGT GTCAGAAATG TTCAGGCCTG GGTCAGGTGT GGTGGCTCAC 4450 | REPEAT
ACCTGTAATC CCAGCACTTT GGGATGCCAA GGTGGGCGGA TCACTTGAGG 4500
TCAGGAGTTC AAGACCAGCC TGGCCAACAT GGTGAAACCC CATCTCTACT 4550
AAAAATACAA AAAAAATTAG TCGGGCATGG TGGTGCGTGC CTCTAATCCC 4600 | NOT SCANNED
AGCTACTTGG GATGCTGAGG TGGTAGAATC GCTTGAACCC AGGAGGCAGA 4650
GGTTGCAGTG AGCCAAGATC ATGTCACTGT GCTCCAGCCT GGGAGACAGA 4700
GTGAGACTCT ATCTCAAA
AA AAAAAAAAAA AAATGTTCAG GCCTATCCCC 4750
TCAGACCCAC ACCTCTGCTC CCTGGACTTG AAATCCTGTG TTTCCTGATG 4800
TGTTGGTGTC ACTCCCACAG GAGGATAAAG GAAAGGACTT TGCTTTCTCT 4850 | REPEAT
CCTCACTCAC ACCCTGCACC AGCCAGGGCC CAATATGAAA CACACACTCA 4900
GTAGTTCTCT CACGAATGAA TGAATGATTG AATGATCCAT AACCTCTTTA 4950
GAGACTGGAT CTGGTTGCAG AATCCTGGGA GGTTCTTGCC ATACCTGCTC 5000 | var(4982):[A:0.02]
CCCATCCCTC CAGAGACTGA GACCCATGTT CCATCCCCTG ACCATCTACC 5050
CCTAAAGCCA CCCCAAGTAC CATATTTCAT GTGACTCTGG GGCTGCTCGG 5100
CTGTGGGAAG GTTTTCAGGG CTCCCTGGTC TTGGTTCTGG GACACCAGAG 5150
GCTCCTGGTT GCTGGGGTCT CTAAGGTCAC TTAGCCCCCA CTGCTCACTG 5200 | var(5169):[A:0.03]
TCATGGGCAT CTCTGACTCT CTCTGCTCCT CCATGTCCTC ATTTTCCTCT 5250 | var(5225):[C:0.21]
CCTTTTATCC CAGCTGAACT GCACAGTTTC CTCCACCCTT AGGCCTTTCC 5300
CAGACACTCC GTCTAACAAG GTTGACTGTC CTGTTCCCTT CCCGCTCACA 5350
CTGTGGCCAG GCCCACCTCC CAGGCAATAG GAAAGGCACA GAAATGAGCC 5400
CAGAGCAGCC ACCCCTGCCA GGTCCATCAT AAGCCACTGT CCCCACGTCC 5450
CTCAGTGAGG CTGACATGTG GAACAGGCCA GGGGACAGGG ACGAGCGACT 5500 | var(5489):[A:0.02]
CCTCCATACA CTCTCTATAC TGACTCACCA GGGGATCAGA GGCAGAAGGA 5550
CAGGTCTGCA GTCCCCAAAG CCCATGGGCT CATTTCACCC ATTTGACTCC 5600
TAACTCCATC CCTGTTCTGC TGTGGGCTCA CATCCTCTAG TGGTTCCTGG 5650
GACCTTCCCC AGGTAGAGCT AGCCAGGCAG GTGCTGTCTG ATGGGTTTGC 5700
TGCCCATTCC ACCTACACCT GTGTCCTCAT GATGACACCA TTGTCATAAG 5750
GTGGGATCTC TCAGACAGGG AGATGCATTA GCCACTGGTG TCTCACTTAG 5800
ACTCTGCCCA ATTTGGATGA ATTTGGTCAA ACTCTAGTTG TGTTTCCTGA 5850 | NOT SCANNED
GGTTGAGAGA AAAGGAAGAA AGCATTTCAC ATGACTGTTT TGGGTTCCTC 5900
TTTTTACCTG AATTTCCACA GGAATTTGTA ACATAGAACT CTTTCTAAAT 5950
TTACTAACAT AACATACATC ACTTCTCCTC ATATGGCATC GTTTCTCTCT 6000
TAATGCAATT GAGAACTCTC AGATATCCTT TCTGACAAGT TCTGTCTTCC 6050
TAACAGGACC CATGAGTCCC TTCTACCCAG GGAGTCACTG ATTTCAAACT 6100
GACTTCAGCA TCTTTCTTTG ATCATAACAT GATCCTACTG GACTTCAGAG 6150
CTTGGTTTAA GAGTTTATCA CGCTCTCTAG AGAATATTCC TCTTATTAAT 6200
TGGTGTTAGA TCCAGAGTAT TAATAACAAT TTTCACAAAT GGAATAATTT 6250
AACTTCTCAA ATTTATATCC CAGATCTACC AAACACACAC GGTCCATGAG 6300 | var(6291):[A:0.09]
GGTCAGGCTT TCAGCAAGTT CATGCTCCTT CCGTTCCACT AGCTGGTTAT 6350
TCTGCATTTG CAAAAAACCC ACATATTTCA GAAAAGATCC ACAGTGTCAT 6400
CATCTGCTCT TTTCAGGGGG AAAAGGGACA TTAAAGACCA AAGACAAGGA 6450 | var(6421):[G:0.07]
ACGTAGATAT GCTGTTAAAT CCAGGCAGCC CCTGCCTGTC ACCCTCACTC 6500
TTTTCTAGAT CATTCCTTGG ACTCTGCTCT ATCTTTAGGG GGTCACTGGC 6550
TCAAGTCAGT CATCATCAAA CACCTGGGAA AAACTGCCCC ACCTTGTGGT 6600
TCTGCTGCCT GACGACTGAG CTACCTTCAG GCTTGCCCCT GGTGTCCCCT 6650
GTTATTTCTG CTGAAACATA CAGTCCCAGG CCAGGCTGCT CAGTATCCTC 6700
AGGGTTTAAG GACAATAGGA AGTCCCATCA TCACCCATCT CTAGGATGTC 6750
CTCAGACAGG GAAGCTGCAG AGAAAACACA CCTAGTGGGG CAAAGTAGGA 6800
CTGTGAAGCT GGAAGGGACC CAGCACCTGT ATGTTCCAGG TGAGGACCCA 6850
CAGGTGGGTC AGGCAGGCAT CAGCCAGTCA GGGAAGGACC AGAAGTGCCT 6900
GGGGCTGTGA CTCCCAGTCC TCGGTCTGTC CACGACCCAA CACTGCTGCT 6950 | var(6922):[G:0.25]
CAGTTCACAC TTGAGAAAGT CTGTGCTTCT CTCACACAGA GCAGGCGGCC 7000
TCACGGTCTC TGAGCCCTCA GATCATTGCA CATCTGTCTT GTGAAACACA 7050
CACTTGCCAT GGGCTTTTAG GGACTTGGGT TGGCTGAGAG GTGGGGAGAT 7100
GCCAACTCTG ATTGAAAAAT GCCCGGACGG AATCCCAGCA CTTTGGGAGG 7150 | REPEAT
CCGAGGCGGG CAGATCACGA GGTCAGGAGG TCGAGACCAT CCTGGCTAAC 7200
AGTGACCATC CTGGCTAAAA TACAAAAAAC TAGCCGGGCA TGGTGGCATG 7250
CACCTGTAGT CCCAGCTACT CAGGAGGCTG AGGCAGGAGA ATCGCTTGAA 7300
CCCGGGAGGA AGAGGTTGCA GTGAGCCAAG ATCGTGCCAC TGCACCCCAG 7350
CCTCAGCAAC AAAGCGAGAC TCTGTCTCAA AAAAAAAAAG AAAGAAAGAA 7400
AAATGCCCAG CCAGGCACGG TGGCTCAGGC CTGTAATCCC AGCACTTTGA 7450 | REPEAT | NOT SCANNED
GAGGCCGAAT