Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 001456 GG 0 0 0 GT 0 1 1 TT 24 22 46 0.000 0.011 0.005 001504 CC 0 0 0 CT 10 8 18 TT 13 15 28 1.775 1.019 2.722 001507 -- 0 0 0 +- 1 0 1 ++ 22 23 45 0.011 0.000 0.006 001903 AA 0 0 0 AT 1 7 8 TT 20 13 33 0.012 0.900 0.479 001942 CC 0 0 0 CT 5 1 6 TT 16 19 35 0.383 0.013 0.256 002239 AA 1 5 6 AG 9 11 20 GG 13 7 20 0.130 0.030 0.080 002478 CC 13 22 35 CG 4 1 5 GG 0 0 0 0.302 0.011 0.178 002483 CC 0 0 0 CT 7 8 15 TT 9 15 24 1.254 1.019 2.211 002507 CC 13 8 21 CT 2 10 12 TT 0 5 5 0.077 0.306 2.051 002644 CC 18 21 39 CG 0 2 2 GG 0 0 0 0.000 0.048 0.026 003017 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 003064 CC 21 23 44 CG 3 0 3 GG 0 0 0 0.107 0.000 0.051 003176 AA 7 2 9 AG 11 8 19 GG 6 13 19 0.160 0.221 1.102 003228 CC 21 23 44 CG 3 0 3 GG 0 0 0 0.107 0.000 0.051 003296 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 003335 AA 24 22 46 AG 0 1 1 GG 0 0 0 0.000 0.011 0.005 003381 GG 6 12 18 GT 11 8 19 TT 7 2 9 0.160 0.153 0.915 003408 AA 23 22 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 003525 AA 7 2 9 AG 11 8 19 GG 6 12 18 0.160 0.153 0.915 003572 CC 0 0 0 CG 0 5 5 GG 24 18 42 0.000 0.342 0.148 003616 CC 0 5 5 CG 3 10 13 GG 20 8 28 0.112 0.306 2.792 003752 AA 0 5 5 AC 7 11 18 CC 9 7 16 1.254 0.030 0.000 003801 CC 10 15 25 CT 6 8 14 TT 0 0 0 0.852 1.019 1.866 004010 GG 20 23 43 GT 3 0 3 TT 0 0 0 0.112 0.000 0.052 004278 CC 0 1 1 CG 0 2 2 GG 16 20 36 0.000 4.707 8.724 004340 CC 5 2 7 CT 9 8 17 TT 2 13 15 0.441 0.221 0.315 004539 AA 17 23 40 AG 1 0 1 GG 0 0 0 0.015 0.000 0.006 004543 AA 0 0 0 AG 1 5 6 GG 17 18 35 0.015 0.342 0.256 004619 CC 19 22 41 CT 5 1 6 TT 0 0 0 0.324 0.011 0.218 004690 CC 18 8 26 CT 4 8 12 TT 1 7 8 1.252 2.112 6.780 004730 AA 0 0 0 AC 0 1 1 CC 23 22 45 0.000 0.011 0.006 004733 CC 12 4 16 CT 8 11 19 TT 3 8 11 0.733 0.004 1.238 004962 CC 16 22 38 CT 5 0 5 TT 1 0 1 0.499 0.000 2.207 005408 CC 17 20 37 CT 0 1 1 TT 0 0 0 0.000 0.012 0.007 005476 AA 3 12 15 AG 10 8 18 GG 4 1 5 0.554 0.053 0.012 005813 * 005850 CC 11 7 18 CT 8 10 18 TT 1 4 5 0.089 0.016 0.023 006365 GG 1 4 5 GT 10 11 21 TT 13 7 20 0.296 0.008 0.022 006423 CC 0 0 0 CT 2 0 2 TT 22 22 44 0.045 0.000 0.023 006444 AA 0 0 0 AG 0 5 5 GG 24 16 40 0.000 0.383 0.156 006551 AA 4 0 4 AG 10 0 10 GG 10 21 31 0.296 0.000 4.201 006562 CC 23 21 44 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 006567 AA 7 2 9 AG 11 8 19 GG 6 11 17 0.160 0.093 0.737 007303 AA 0 0 0 AG 0 7 7 GG 23 16 39 0.000 0.741 0.312 007664 AA 0 0 0 AC 1 0 1 CC 18 18 36 0.014 0.000 0.007 007685 CC 4 10 14 CT 9 6 15 TT 6 2 8 0.034 0.516 1.036 008485 AA 6 13 19 AC 11 8 19 CC 7 2 9 0.160 0.221 1.102 008525 CC 0 0 0 CG 1 0 1 GG 23 23 46 0.011 0.000 0.005 008548 GG 0 0 0 GT 1 0 1 TT 23 23 46 0.011 0.000 0.005 008802 AA 0 0 0 AG 3 0 3 GG 21 23 44 0.107 0.000 0.051 008893 AA 1 5 6 AG 4 10 14 GG 19 8 27 1.361 0.306 3.072 008910 GG 23 18 41 GT 0 5 5 TT 0 0 0 0.000 0.342 0.152 009373 CC 0 2 2 CG 10 9 19 GG 13 12 25 1.775 0.028 0.473 009425 GG 21 23 44 GT 2 0 2 TT 0 0 0 0.048 0.000 0.023 009536 AA 18 16 34 AG 0 4 4 GG 0 0 0 0.000 0.247 0.117 009681 GG 18 20 38 GT 2 0 2 TT 0 0 0 0.055 0.000 0.026 009804 CC 20 18 38 CT 1 0 1 TT 0 0 0 0.012 0.000 0.007 009909 AA 0 0 0 AG 1 0 1 GG 20 18 38 0.012 0.000 0.007 010057 CC 21 17 38 CG 0 1 1 GG 0 0 0 0.000 0.015 0.007 010081 CC 13 12 25 CG 8 6 14 GG 0 0 0 1.163 0.720 1.866 010143 CC 18 5 23 CT 3 8 11 TT 0 5 5 0.124 0.222 3.128 010293 CC 0 0 0 CT 8 6 14 TT 13 11 24 1.163 0.781 1.938 010397 GG 0 0 0 GT 0 1 1 TT 22 22 44 0.000 0.011 0.006 010451 AA 24 18 42 AT 0 5 5 TT 0 0 0 0.000 0.342 0.148 010637 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 010715 CC 20 23 43 CT 3 0 3 TT 0 0 0 0.112 0.000 0.052 010745 AA 0 0 0 AG 1 0 1 GG 21 23 44 0.012 0.000 0.006 010752 CC 22 18 40 CT 0 5 5 TT 0 0 0 0.000 0.342 0.156 010761 CC 17 8 25 CT 3 10 13 TT 1 5 6 2.136 0.306 3.295 010803 CC 0 0 0 CT 0 5 5 TT 21 18 39 0.000 0.342 0.160 010826 AA 0 0 0 AG 0 5 5 GG 21 18 39 0.000 0.342 0.160 012723 CC 22 21 43 CT 2 0 2 TT 0 0 0 0.045 0.000 0.023 013100 AA 0 0 0 AG 11 6 17 GG 13 12 25 2.121 0.720 2.704 013320 AA 0 0 0 AG 0 5 5 GG 24 18 42 0.000 0.342 0.148 013417 AA 23 23 46 AT 1 0 1 TT 0 0 0 0.011 0.000 0.005 013444 AA 7 2 9 AG 11 8 19 GG 6 13 19 0.160 0.221 1.102 013536 AA 1 0 1 AG 2 0 2 GG 21 23 44 4.959 0.000 10.729 013551 AA 0 0 0 AG 2 0 2 GG 22 23 45 0.045 0.000 0.022 013588 AA 0 0 0 AG 0 5 5 GG 24 18 42 0.000 0.342 0.148 013643 AA 0 0 0 AG 6 1 7 GG 16 21 37 0.548 0.012 0.329 014003 CC 22 23 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 014055 CC 11 15 26 CT 9 8 17 TT 0 0 0 1.686 1.019 2.610 014081 CC 0 0 0 CT 0 5 5 TT 21 18 39 0.000 0.342 0.160 014247 CC 2 2 4 CT 6 9 15 TT 10 12 22 0.516 0.028 0.359 014437 CC 23 18 41 CT 0 5 5 TT 0 0 0 0.000 0.342 0.152 014696 AA 0 0 0 AT 2 0 2 TT 21 23 44 0.048 0.000 0.023 014817 AA 0 0 0 AG 6 8 14 GG 10 15 25 0.852 1.019 1.866 014851 AA 0 0 0 AG 6 8 14 GG 9 15 24 0.937 1.019 1.938 015029 CC 14 23 37 CG 1 0 1 GG 0 0 0 0.018 0.000 0.007 015054 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 001507: AT Tri-allelic sites: Site Genotype AD-pop ED-pop Total-pop 005813 AA 0 0 0 005813 AC 0 0 0 005813 AG 0 4 4 005813 CC 6 2 8 005813 CG 9 8 17 005813 GG 5 7 12