Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000980 00000 ------------ T 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 001026 00000 ------------ T 0.86 0.95 0.90 C 0.14 0.05 0.10 0000 --- --- --- --- 001199 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001225 00000 ------------ A 0.66 0.71 0.69 G 0.34 0.29 0.31 0000 --- --- --- --- 001536 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001739 00000 ------------ C 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 001980 00000 ------------ T 0.55 0.72 0.64 A 0.45 0.28 0.36 0000 --- --- --- --- 002049 00049 5' UTR C 0.71 0.72 0.72 T 0.29 0.28 0.28 0000 --- --- --- --- 002212 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 002219 00000 ------------ G 0.54 0.83 0.68 A 0.46 0.17 0.32 0000 --- --- --- --- 002277 00000 ------------ A 0.96 0.50 0.73 G 0.04 0.50 0.27 0000 --- --- --- --- 002347 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002370 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003032 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003076 00000 ------------ G 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 003131 00000 ------------ G 0.78 1.00 0.88 C 0.22 0.00 0.12 0000 --- --- --- --- 003173 00000 ------------ G 0.63 0.95 0.79 C 0.37 0.05 0.21 0000 --- --- --- --- 003211 00000 ------------ A 0.85 0.73 0.79 C 0.15 0.27 0.21 0000 --- --- --- --- 003301 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004286 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 004524 00000 ------------ C 0.77 0.81 0.79 A 0.23 0.19 0.21 0000 --- --- --- --- 004870 00000 ------------ - 0.38 0.05 0.22 + 0.62 0.95 0.78 0000 --- --- --- --- 005101 00000 ------------ T 0.54 0.72 0.63 C 0.46 0.28 0.37 0000 --- --- --- --- 005247 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 005268 00000 ------------ A 0.54 0.72 0.63 G 0.46 0.28 0.37 0000 --- --- --- --- 005380 00000 ------------ G 0.67 0.80 0.73 A 0.33 0.20 0.27 0000 --- --- --- --- 005383 00000 ------------ T 0.54 0.74 0.64 C 0.46 0.26 0.36 0000 --- --- --- --- 005591 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 005922 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005986 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 006256 00000 ------------ C 0.96 0.50 0.74 T 0.04 0.50 0.26 0000 --- --- --- --- 006508 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008130 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008287 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008306 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008472 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008532 00000 ------------ T 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- 008654 00000 ------------ A 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 008780 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008998 00000 ------------ T 0.78 0.69 0.74 C 0.22 0.31 0.26 0000 --- --- --- --- 009046 00000 ------------ A 0.94 0.50 0.73 G 0.06 0.50 0.27 0000 --- --- --- --- 009154 00000 ------------ A 0.88 0.75 0.82 G 0.12 0.25 0.18 0000 --- --- --- --- 009186 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009356 00000 ------------ T 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- 009631 00000 ------------ C 0.62 0.96 0.79 T 0.38 0.04 0.21 0000 --- --- --- --- 009661 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009803 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 010147 00000 ------------ T 0.96 0.50 0.73 A 0.04 0.50 0.27 0000 --- --- --- --- 010367 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010444 00000 ------------ A 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 010803 00000 ------------ T 0.92 0.80 0.86 C 0.08 0.20 0.14 0000 --- --- --- --- 010832 00000 ------------ G 0.96 0.50 0.74 A 0.04 0.50 0.26 0000 --- --- --- --- 011164 00000 ------------ C 1.00 0.84 0.92 T 0.00 0.16 0.08 0000 --- --- --- --- 011283 00000 ------------ A 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 011428 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011959 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012186* 012187 00000 ------------ G 0.90 0.76 0.84 A 0.10 0.24 0.16 0000 --- --- --- --- 012574 00000 ------------ A 0.83 0.97 0.90 G 0.17 0.03 0.10 0000 --- --- --- --- 013263 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 013727 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 014282 00000 ------------ A 0.83 0.95 0.90 G 0.17 0.05 0.10 0000 --- --- --- --- 014838 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015565 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 016026 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 016607 00000 ------------ A 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 016747 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 017223 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 017257 00000 ------------ A 0.92 0.79 0.86 T 0.08 0.21 0.14 0000 --- --- --- --- 017296 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 017406 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 017426 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018047 00000 ------------ C 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 018305 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018633 00000 ------------ C 0.78 0.80 0.79 T 0.22 0.20 0.21 0000 --- --- --- --- 018799 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019080 00794 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0242 ATC ATA ILE(I) ILE(I) 019384 00000 ------------ G 0.95 0.92 0.94 C 0.05 0.08 0.06 0000 --- --- --- --- 019581 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 020098 00000 ------------ - 0.23 0.20 0.22 + 0.77 0.80 0.78 0000 --- --- --- --- 020726 00000 ------------ - 0.02 0.09 0.06 + 0.98 0.91 0.94 0000 --- --- --- --- 021219 00000 ------------ A 0.60 0.95 0.77 G 0.40 0.05 0.23 0000 --- --- --- --- 021798 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021929 00000 ------------ A 0.83 1.00 0.92 G 0.17 0.00 0.08 0000 --- --- --- --- 022603 00000 ------------ G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 023327 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023391 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023485 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023502 00000 ------------ T 0.92 0.87 0.90 C 0.08 0.13 0.10 0000 --- --- --- --- 023697 00000 ------------ C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 023816 00000 ------------ T 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 023916 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 024007 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024416 01235 SYNON C 0.91 0.80 0.86 T 0.09 0.20 0.14 0389 GAC GAT ASP(D) ASP(D) 024655 00000 ------------ A 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 024727 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024764 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 025713 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 025742 00000 ------------ A 0.71 0.80 0.76 G 0.29 0.20 0.24 0000 --- --- --- --- 025791 00000 ------------ A 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 026050 00000 ------------ T 0.91 0.82 0.87 C 0.09 0.18 0.13 0000 --- --- --- --- 026298 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026481 00000 ------------ T 0.71 0.81 0.76 C 0.29 0.19 0.24 0000 --- --- --- --- 026963 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 027026 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027219 01323 SYNON C 0.83 1.00 0.91 T 0.17 0.00 0.09 0419 CTG TTG LEU(L) LEU(L) 027525 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 028112 00000 ------------ A 0.98 0.86 0.92 C 0.02 0.14 0.08 0000 --- --- --- --- 028301 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 028506 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029237 00000 ------------ C 0.96 0.50 0.73 T 0.04 0.50 0.27 0000 --- --- --- --- 029501 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 029603 00000 ------------ C 0.96 0.50 0.73 T 0.04 0.50 0.27 0000 --- --- --- --- 029753 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030099 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 030337 00000 ------------ G 0.90 0.37 0.64 A 0.10 0.63 0.36 0000 --- --- --- --- 030338 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 030448 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 030493 00000 ------------ A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 030549 00000 ------------ - 0.96 0.87 0.91 + 0.04 0.13 0.09 0000 --- --- --- --- 030762 00000 ------------ C 0.38 0.76 0.56 T 0.62 0.24 0.44 0000 --- --- --- --- 031253 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031826 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032047 00000 ------------ G 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 032150 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 032157 00000 ------------ A 0.35 0.70 0.55 C 0.65 0.30 0.45 0000 --- --- --- --- 032824 00000 ------------ G 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 032860 00000 ------------ C 0.90 1.00 0.96 T 0.10 0.00 0.04 0000 --- --- --- --- 033190 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 033451 00000 ------------ C 0.96 0.50 0.75 T 0.04 0.50 0.25 0000 --- --- --- --- 033529 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 033554 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033819 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 033953 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 034056 01544 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0492 CAC CAT HIS(H) HIS(H) 034257 00000 ------------ T 0.96 0.95 0.95 C 0.04 0.05 0.05 0000 --- --- --- --- 035148 00000 ------------ A 0.77 0.81 0.79 G 0.23 0.19 0.21 0000 --- --- --- --- 035163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035311 00000 ------------ T 0.96 0.48 0.73 C 0.04 0.52 0.27 0000 --- --- --- --- 035974 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036079 00000 ------------ C 0.94 0.87 0.90 T 0.06 0.13 0.10 0000 --- --- --- --- 036234 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 036623 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036661 00000 ------------ - 0.04 0.05 0.04 + 0.96 0.95 0.96 0000 --- --- --- --- 036728 00000 ------------ - 0.05 0.07 0.06 + 0.95 0.93 0.94 0000 --- --- --- --- 036798 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 036868 00000 ------------ C 0.77 0.90 0.84 A 0.23 0.10 0.16 0000 --- --- --- --- 036998 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004870: C 020098: CATA 020726: CT 030549: TT 036661: CTC 036728: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 012186 A 0.98 0.97 0.97 G 0.00 0.03 0.01 T 0.02 0.00 0.01