Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000103 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 000434 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001568 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002210 00000 ------------ - 0.59 0.77 0.68 + 0.41 0.23 0.32 0000 --- --- --- --- 002730 00000 ------------ G 0.76 0.91 0.84 A 0.24 0.09 0.16 0000 --- --- --- --- 002815 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005343 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 005484 00000 ------------ G 1.00 0.52 0.76 T 0.00 0.48 0.24 0000 --- --- --- --- 005663 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 006185 00000 ------------ G 1.00 0.89 0.95 T 0.00 0.11 0.05 0000 --- --- --- --- 006198 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 006227 00000 ------------ G 0.54 0.78 0.66 A 0.46 0.22 0.34 0000 --- --- --- --- 006909 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007065 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007222 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 007388 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007426 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 007711 00000 ------------ T 0.75 0.93 0.84 G 0.25 0.07 0.16 0000 --- --- --- --- 007744 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 007793 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007929 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 008899 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009671 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 013809 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 013960 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014047 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014229 00463 NON-SYN G 0.73 0.91 0.82 A 0.27 0.09 0.18 0145 GTT ATT VAL(V) ILE(I) 014342 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014353 00000 ------------ A 1.00 0.55 0.77 T 0.00 0.45 0.23 0000 --- --- --- --- 014615 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 014673 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 014683 00000 ------------ C 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 014729 00000 ------------ - 0.57 0.30 0.43 + 0.42 0.70 0.57 0000 --- --- --- --- 014769 00000 ------------ G 0.85 0.81 0.82 A 0.15 0.19 0.18 0000 --- --- --- --- 014938 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016132 00000 ------------ G 1.00 0.53 0.74 A 0.00 0.47 0.26 0000 --- --- --- --- 016741 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016762 00000 ------------ A 0.61 0.77 0.69 G 0.39 0.23 0.31 0000 --- --- --- --- 016882 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016910 00000 ------------ A 0.59 0.78 0.69 G 0.41 0.22 0.31 0000 --- --- --- --- 016977 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 017025 00000 ------------ - 0.41 0.23 0.32 + 0.59 0.77 0.68 0000 --- --- --- --- 017130 00000 ------------ T 0.63 0.76 0.70 A 0.37 0.24 0.30 0000 --- --- --- --- 017232 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 017724 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 018068 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018106 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018270 00000 ------------ - 0.43 0.24 0.34 + 0.57 0.76 0.66 0000 --- --- --- --- 018274 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018317 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 018415 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 018608 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018760 00000 ------------ G 0.60 0.77 0.68 A 0.40 0.23 0.32 0000 --- --- --- --- 019101 00000 ------------ - 0.85 1.00 0.92 + 0.15 0.00 0.08 0000 --- --- --- --- 019251 00000 ------------ C 0.68 0.85 0.77 G 0.32 0.15 0.23 0000 --- --- --- --- 019633 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019700 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 020917 00000 ------------ - 0.20 0.57 0.38 + 0.80 0.43 0.62 0000 --- --- --- --- 021467 00000 ------------ T 1.00 0.84 0.92 C 0.00 0.16 0.08 0000 --- --- --- --- 021550 00000 ------------ C 0.71 0.77 0.74 T 0.29 0.23 0.26 0000 --- --- --- --- 021987 00000 ------------ A 1.00 0.85 0.92 G 0.00 0.15 0.08 0000 --- --- --- --- 022451 00000 ------------ C 0.85 0.46 0.66 A 0.15 0.54 0.34 0000 --- --- --- --- 022520 00000 ------------ T 0.60 0.78 0.69 G 0.40 0.22 0.31 0000 --- --- --- --- 022537 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 023324 00000 ------------ G 0.60 0.80 0.70 A 0.40 0.20 0.30 0000 --- --- --- --- 023583 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023657 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 023835* 024438 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 024603 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 024754 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024822 00000 ------------ G 1.00 0.50 0.75 A 0.00 0.50 0.25 0000 --- --- --- --- 024838 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025893 00000 ------------ G 0.61 0.80 0.70 A 0.39 0.20 0.30 0000 --- --- --- --- 025920 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026064 00000 ------------ G 0.60 0.78 0.69 A 0.40 0.22 0.31 0000 --- --- --- --- 026457 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 026891 00000 ------------ T 0.82 0.48 0.65 C 0.18 0.52 0.35 0000 --- --- --- --- 026935 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 027077 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 027366 00000 ------------ G 0.76 0.91 0.84 A 0.24 0.09 0.16 0000 --- --- --- --- 027402 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 028912 00000 ------------ C 0.60 0.76 0.68 T 0.40 0.24 0.32 0000 --- --- --- --- 029879 00000 ------------ - 0.59 0.74 0.66 + 0.41 0.26 0.34 0000 --- --- --- --- 029959 00000 ------------ G 0.96 0.53 0.77 A 0.04 0.47 0.23 0000 --- --- --- --- 030109 00000 ------------ A 0.77 0.86 0.81 C 0.23 0.14 0.19 0000 --- --- --- --- 030150 00000 ------------ A 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 030230 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 030464 00000 ------------ T 0.57 0.77 0.67 C 0.43 0.23 0.33 0000 --- --- --- --- 030523 01185 SYNON A 0.59 0.77 0.68 G 0.41 0.23 0.32 0385 GGA GGG GLY(G) GLY(G) 031401 00000 ------------ C 0.46 0.57 0.51 A 0.54 0.43 0.49 0000 --- --- --- --- 031402 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031935 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032042 01375 NON-SYN A 0.85 1.00 0.92 G 0.15 0.00 0.08 0449 AGG GGG ARG(R) GLY(G) 032158 01491 SYNON C 0.88 0.85 0.86 T 0.12 0.15 0.14 0487 ACC ACT THR(T) THR(T) 032179 01512 SYNON C 0.88 1.00 0.94 T 0.12 0.00 0.06 0494 GAC GAT ASP(D) ASP(D) 032319 00000 ------------ A 0.60 0.72 0.66 G 0.40 0.28 0.34 0000 --- --- --- --- 032607 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 032687 00000 ------------ T 0.48 0.57 0.52 C 0.52 0.43 0.48 0000 --- --- --- --- 032694 00000 ------------ G 0.88 0.85 0.86 C 0.12 0.15 0.14 0000 --- --- --- --- 032773 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032810 00000 ------------ T 0.88 0.85 0.86 G 0.12 0.15 0.14 0000 --- --- --- --- 033022 00000 ------------ T 0.48 0.57 0.52 C 0.52 0.43 0.48 0000 --- --- --- --- 033039 00000 ------------ - 0.88 0.85 0.86 + 0.12 0.15 0.14 0000 --- --- --- --- 034453 01662 SYNON C 1.00 0.50 0.76 T 0.00 0.50 0.24 0544 TAC TAT TYR(Y) TYR(Y) 034556 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 034677 01755 SYNON G 0.86 1.00 0.93 A 0.14 0.00 0.07 0575 CTG CTA LEU(L) LEU(L) 035338 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 035770 00000 ------------ T 0.87 0.84 0.86 G 0.13 0.16 0.14 0000 --- --- --- --- 036310 00000 ------------ A 0.48 0.57 0.52 G 0.52 0.43 0.48 0000 --- --- --- --- 036353 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 037543 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 038068 00000 ------------ C 0.87 0.85 0.86 G 0.13 0.15 0.14 0000 --- --- --- --- 038411 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 038451 00000 ------------ - 0.87 0.84 0.86 + 0.13 0.16 0.14 0000 --- --- --- --- 038699 00000 ------------ G 0.59 0.74 0.66 C 0.41 0.26 0.34 0000 --- --- --- --- 038886 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 038946 00000 ------------ C 0.87 0.84 0.86 T 0.13 0.16 0.14 0000 --- --- --- --- 038999 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 039570 00000 ------------ A 1.00 0.85 0.93 G 0.00 0.15 0.07 0000 --- --- --- --- 042858 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042932 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042966 00000 ------------ A 0.88 0.84 0.86 G 0.12 0.16 0.14 0000 --- --- --- --- 043286 00000 ------------ G 0.74 0.91 0.83 A 0.26 0.09 0.17 0000 --- --- --- --- 043341 00000 ------------ A 1.00 0.89 0.94 G 0.00 0.11 0.06 0000 --- --- --- --- 043457 00000 ------------ A 0.88 0.84 0.86 G 0.12 0.16 0.14 0000 --- --- --- --- 044031 00000 ------------ G 0.53 0.71 0.62 T 0.47 0.29 0.38 0000 --- --- --- --- 044231 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 044473 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 044625 00000 ------------ T 0.48 0.70 0.59 A 0.52 0.30 0.41 0000 --- --- --- --- 045267 02434 NON-SYN G 1.00 0.55 0.77 A 0.00 0.45 0.23 0802 GTT ATT VAL(V) ILE(I) 045351 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 045802 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 047068 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 047206 00000 ------------ - 0.22 0.17 0.20 + 0.78 0.83 0.80 0000 --- --- --- --- 047463 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 047469 00000 ------------ G 0.48 0.68 0.58 C 0.52 0.32 0.42 0000 --- --- --- --- 047664 00000 ------------ G 0.48 0.68 0.58 A 0.52 0.32 0.42 0000 --- --- --- --- 047679 00000 ------------ G 0.50 0.68 0.60 A 0.50 0.32 0.40 0000 --- --- --- --- 053992 00000 ------------ C 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 054145 00000 ------------ G 1.00 0.50 0.73 A 0.00 0.50 0.27 0000 --- --- --- --- 054295 00000 ------------ G 0.84 0.50 0.66 A 0.16 0.50 0.34 0000 --- --- --- --- 054361 00000 ------------ C 1.00 0.50 0.73 G 0.00 0.50 0.27 0000 --- --- --- --- 054381 00000 ------------ - 0.13 0.50 0.33 + 0.87 0.50 0.67 0000 --- --- --- --- 054636 02813 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0928 CGA CAA ARG(R) GLN(Q) 054711 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 055108 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 055216 00000 ------------ C 0.67 0.41 0.54 T 0.33 0.59 0.46 0000 --- --- --- --- 055424 00000 ------------ C 0.80 0.52 0.66 T 0.20 0.48 0.34 0000 --- --- --- --- 055463 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 055598 00000 ------------ C 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 055651 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 055836 00000 ------------ T 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 055897 02828 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0933 GGT GTT GLY(G) VAL(V) 056043 00000 ------------ A 1.00 0.55 0.78 G 0.00 0.45 0.22 0000 --- --- --- --- 056117 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 056269 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 056848 00000 ------------ C 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 057056 00000 ------------ C 0.69 0.41 0.55 T 0.31 0.59 0.45 0000 --- --- --- --- 060254 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 060624 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 060868 00000 ------------ C 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 060893 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 061192 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 061215 00000 ------------ A 0.91 0.89 0.90 G 0.09 0.11 0.10 0000 --- --- --- --- 061607 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 061611 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 061672 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 061827 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 062566 03128 NON-SYN T 0.96 1.00 0.98 C 0.04 0.00 0.02 1033 ATT ACT ILE(I) THR(T) 062577 03139 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 1037 GAC AAC ASP(D) ASN(N) 062594 03156 SYNON G 0.92 1.00 0.96 A 0.08 0.00 0.04 1042 AAG AAA LYS(K) LYS(K) 062595 03157 NON-SYN C 0.92 1.00 0.96 A 0.08 0.00 0.04 1043 CAG AAG GLN(Q) LYS(K) 062668 00000 ------------ T 0.85 0.41 0.64 C 0.15 0.59 0.36 0000 --- --- --- --- 062752 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 062807 00000 ------------ T 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 062820 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 063534 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 063546 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 063613 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 068652 00000 ------------ A 0.98 0.90 0.94 G 0.02 0.10 0.06 0000 --- --- --- --- 068778 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 068852 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 069751 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 069934 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 069971 00000 ------------ G 0.89 0.89 0.89 A 0.11 0.11 0.11 0000 --- --- --- --- 070216 00000 ------------ T 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 070392 00000 ------------ A 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 070413 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 070547 00000 ------------ G 0.87 0.89 0.88 A 0.13 0.11 0.12 0000 --- --- --- --- 070756 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 070788 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 071062 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 071129 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 071160 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 071432 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 071450 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 071532 00000 ------------ G 0.74 0.86 0.80 A 0.26 0.14 0.20 0000 --- --- --- --- 071606 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 071651 00000 ------------ T 0.61 0.64 0.62 C 0.39 0.36 0.38 0000 --- --- --- --- 071773 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 071853 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 072647 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 074476 00000 ------------ G 0.79 0.59 0.69 A 0.21 0.41 0.31 0000 --- --- --- --- 074909 00000 ------------ G 1.00 0.88 0.94 A 0.00 0.12 0.06 0000 --- --- --- --- 075132 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 075661 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 075874 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 076106 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 076157 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 076274 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 076354 00000 ------------ A 0.65 0.86 0.75 G 0.35 0.14 0.25 0000 --- --- --- --- 076367 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 076749 00000 ------------ C 0.77 0.87 0.82 T 0.23 0.13 0.18 0000 --- --- --- --- 077324 03959 NON-SYN G 0.85 1.00 0.93 A 0.15 0.00 0.07 1310 AGT AAT SER(S) ASN(N) 077429 00000 ------------ C 0.38 0.76 0.56 G 0.62 0.24 0.44 0000 --- --- --- --- 077451 00000 ------------ G 0.65 0.87 0.76 A 0.35 0.13 0.24 0000 --- --- --- --- 077732 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 078218 00000 ------------ - 0.65 0.85 0.74 + 0.35 0.15 0.26 0000 --- --- --- --- 078340 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 078385 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 078402 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 078767 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 078915 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 080151 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 080179 00000 ------------ - 0.58 0.11 0.36 + 0.42 0.89 0.64 0000 --- --- --- --- 080466 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 080629 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 080691 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 080830 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 080840 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 081045 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 081163 00000 ------------ T 0.77 0.89 0.83 C 0.23 0.11 0.17 0000 --- --- --- --- 081299 00000 ------------ A 0.77 0.89 0.83 G 0.23 0.11 0.17 0000 --- --- --- --- 081337 00000 ------------ T 0.42 0.75 0.58 G 0.58 0.25 0.42 0000 --- --- --- --- 081918 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 082642 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 082886 00000 ------------ - 0.79 0.90 0.85 + 0.21 0.10 0.15 0000 --- --- --- --- 083092 00000 ------------ C 0.46 0.90 0.66 T 0.54 0.10 0.34 0000 --- --- --- --- 083262 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 083313 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 083755 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 083811 00000 ------------ G 0.84 0.95 0.90 A 0.16 0.05 0.10 0000 --- --- --- --- 083866 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 083932 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 083946 00000 ------------ T 0.48 0.86 0.67 C 0.52 0.14 0.33 0000 --- --- --- --- 087747 00000 ------------ - 1.00 0.93 0.97 + 0.00 0.07 0.03 0000 --- --- --- --- 087775 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 087824 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 087843 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 087916 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 088355 00000 ------------ A 0.85 0.96 0.90 G 0.15 0.04 0.10 0000 --- --- --- --- 088471 00000 ------------ T 0.89 0.91 0.90 C 0.11 0.09 0.10 0000 --- --- --- --- 088529 04296 SYNON G 0.88 0.95 0.92 A 0.12 0.05 0.08 1422 GCG GCA ALA(A) ALA(A) 088574 04341 NON-SYN A 1.00 0.91 0.95 C 0.00 0.09 0.05 1437 GAA GAC GLU(E) ASP(D) 088724 00000 ------------ G 0.91 0.91 0.91 A 0.09 0.09 0.09 0000 --- --- --- --- 088872 00000 ------------ - 0.77 1.00 0.89 + 0.23 0.00 0.11 0000 --- --- --- --- 088962 00000 ------------ A 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 088977 00000 ------------ C 0.67 0.91 0.79 T 0.33 0.09 0.21 0000 --- --- --- --- 089993 00000 ------------ T 0.46 0.87 0.66 C 0.54 0.13 0.34 0000 --- --- --- --- 090122 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 090263 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 090487 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 090890 00000 ------------ G 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 090967 00000 ------------ C 0.89 0.91 0.90 T 0.11 0.09 0.10 0000 --- --- --- --- 091022 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 091091 00000 ------------ C 0.65 0.91 0.78 T 0.35 0.09 0.22 0000 --- --- --- --- 091111 00000 ------------ G 0.46 0.87 0.66 T 0.54 0.13 0.34 0000 --- --- --- --- 091150 00000 ------------ A 1.00 0.48 0.74 G 0.00 0.52 0.26 0000 --- --- --- --- 091389 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 091451 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 091489 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 091720 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 092073 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 092142 00000 ------------ - 0.46 0.87 0.66 + 0.54 0.13 0.34 0000 --- --- --- --- 092307 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 092354 00000 ------------ T 0.86 0.73 0.80 C 0.14 0.27 0.20 0000 --- --- --- --- 092775 00000 ------------ C 0.89 0.95 0.92 T 0.11 0.05 0.08 0000 --- --- --- --- 092853 00000 ------------ C 1.00 0.91 0.95 T 0.00 0.09 0.05 0000 --- --- --- --- 092932 00000 ------------ - 0.53 0.14 0.32 + 0.47 0.86 0.68 0000 --- --- --- --- 093614 00000 ------------ T 0.46 0.87 0.66 A 0.54 0.13 0.34 0000 --- --- --- --- 093657 00000 ------------ - 0.75 1.00 0.87 + 0.25 0.00 0.13 0000 --- --- --- --- 093963 00000 ------------ A 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 094020 00000 ------------ A 0.81 1.00 0.91 G 0.19 0.00 0.09 0000 --- --- --- --- 094188 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 094245 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 094666 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 095168 00000 ------------ C 0.46 0.87 0.66 T 0.54 0.13 0.34 0000 --- --- --- --- 095180 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 095489 00000 ------------ G 0.65 0.91 0.77 T 0.35 0.09 0.23 0000 --- --- --- --- 095920 00000 ------------ A 0.74 1.00 0.88 T 0.26 0.00 0.12 0000 --- --- --- --- 095932 00000 ------------ G 0.74 1.00 0.88 C 0.26 0.00 0.12 0000 --- --- --- --- 095940 00000 ------------ G 0.88 0.91 0.90 A 0.12 0.09 0.10 0000 --- --- --- --- 096332 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 096663 00000 ------------ G 0.29 0.87 0.57 T 0.71 0.13 0.43 0000 --- --- --- --- 097114 00000 ------------ G 0.28 0.87 0.58 T 0.72 0.13 0.42 0000 --- --- --- --- 097220 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 097663 00000 ------------ A 0.48 0.86 0.67 G 0.52 0.14 0.33 0000 --- --- --- --- 097762 00000 ------------ A 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 097822 00000 ------------ A 0.46 0.87 0.66 G 0.54 0.13 0.34 0000 --- --- --- --- 097954 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 098280 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 098346 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 098400 04836 SYNON A 0.89 0.91 0.90 G 0.11 0.09 0.10 1602 AAA AAG LYS(K) LYS(K) 098552 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 098597 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 098799 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 099007 00000 ------------ G 1.00 0.50 0.77 A 0.00 0.50 0.23 0000 --- --- --- --- 099016 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 099065 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 099167 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 099213 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 099216 00000 ------------ A 0.29 0.94 0.58 G 0.71 0.06 0.42 0000 --- --- --- --- 099293 00000 ------------ - 0.90 0.90 0.90 + 0.10 0.10 0.10 0000 --- --- --- --- 099337 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 100024 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 100064 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 100109 00000 ------------ T 0.76 1.00 0.89 C 0.24 0.00 0.11 0000 --- --- --- --- 100507 00000 ------------ C 0.62 0.93 0.77 T 0.38 0.07 0.23 0000 --- --- --- --- 101022 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 101173 00000 ------------ C 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 101324 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 101344 00000 ------------ C 0.89 0.95 0.92 G 0.11 0.05 0.08 0000 --- --- --- --- 101596 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 101622 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002210: T 005663: C 014729: AGCTAC 016977: TGTT 017025: A 018270: GGAA 019101: GT 020917: GTAA 029879: AT 033039: T 038451: A 047206: T 054381: A 054711: G 071432: A 078218: T 080179: GTTT 082642: CCT 082886: TAATTATTTAAGTTAATTATTTAAAGACTT 083755: G 087747: TTTG 088872: T 090487: G 091720: A 092073: A 092142: T 092932: C 093657: A 097220: CT 099293: A 101022: G 101596: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 023835 A 0.17 0.55 0.37 C 0.05 0.00 0.02 G 0.78 0.45 0.61