Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000088 GG 21 18 39 GT 1 1 2 TT 0 0 0 0.012 0.014 0.026 000094 AA 14 20 34 AG 9 0 9 GG 0 0 0 1.361 0.000 0.587 000275 CC 22 21 43 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 000338 CC 11 12 23 CT 9 7 16 TT 3 1 4 0.277 0.000 0.244 000734 CC 8 10 18 CT 9 7 16 TT 6 1 7 1.028 0.025 1.036 000747 AA 0 0 0 AT 1 0 1 TT 23 18 41 0.011 0.000 0.006 000762 CC 0 0 0 CT 1 0 1 TT 23 18 41 0.011 0.000 0.006 000799 CC 18 11 29 CT 4 7 11 TT 2 1 3 3.840 0.007 1.610 001225 CC 17 23 40 CT 6 0 6 TT 0 0 0 0.517 0.000 0.224 001354 CC 9 1 10 CT 11 8 19 TT 3 14 17 0.016 0.011 1.096 001376 CC 8 23 31 CT 10 0 10 TT 5 0 5 0.306 0.000 5.998 001389 CC 5 0 5 CG 10 0 10 GG 8 23 31 0.306 0.000 5.998 001440 CC 9 0 9 CT 10 1 11 TT 4 22 26 0.175 0.011 9.154 001613 AA 15 14 29 AG 5 8 13 GG 3 1 4 3.728 0.011 1.801 001968 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 002015 CC 17 23 40 CG 6 0 6 GG 1 0 1 0.240 0.000 1.527 002142 AA 18 22 40 AT 5 1 6 TT 1 0 1 0.644 0.011 1.527 002319 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 002469 CC 1 0 1 CT 6 1 7 TT 17 22 39 0.240 0.011 0.919 002692 CC 0 1 1 CG 0 2 2 GG 24 18 42 0.000 4.203 10.228 002887 CC 1 0 1 CG 5 1 6 GG 18 20 38 0.644 0.012 1.407 003068 CC 1 0 1 CG 6 1 7 GG 17 21 38 0.240 0.012 0.875 003169 CC 0 0 0 CT 9 0 9 TT 15 22 37 1.278 0.000 0.541 003296 AA 23 22 45 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 003639 AA 0 0 0 AG 0 4 4 GG 24 17 41 0.000 0.233 0.097 003855 AA 23 21 44 AT 1 0 1 TT 0 0 0 0.011 0.000 0.006 004754 AA 1 0 1 AG 5 1 6 GG 18 20 38 0.644 0.012 1.407 005091 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 005165 CC 11 1 12 CG 10 8 18 GG 3 14 17 0.094 0.011 2.385 005167 GG 23 23 46 GT 1 0 1 TT 0 0 0 0.011 0.000 0.005 005509 AA 4 0 4 AG 11 1 12 GG 9 22 31 0.042 0.011 2.659 005613 AA 20 23 43 AG 4 0 4 GG 0 0 0 0.198 0.000 0.093 005617 CC 19 23 42 CT 4 0 4 TT 1 0 1 1.361 0.000 3.895 005701 CC 15 19 34 CG 9 0 9 GG 0 0 0 1.278 0.000 0.587 005921 CC 15 13 28 CT 6 6 12 TT 3 1 4 2.667 0.078 2.198 006027 GG 0 0 0 GT 11 0 11 TT 13 20 33 2.121 0.000 0.898 006079 AA 0 0 0 AC 3 0 3 CC 21 20 41 0.107 0.000 0.055 006091 -- 22 20 42 +- 2 0 2 ++ 0 0 0 0.045 0.000 0.024 006174 CC 0 0 0 CT 1 0 1 TT 23 20 43 0.011 0.000 0.006 006305 CC 10 1 11 CT 12 6 18 TT 2 12 14 0.375 0.048 1.083 006469 AA 0 0 0 AG 1 0 1 GG 20 21 41 0.012 0.000 0.006 006484 GG 9 20 29 GT 8 1 9 TT 4 0 4 0.777 0.012 4.749 006579 AA 3 12 15 AG 10 8 18 GG 10 1 11 0.040 0.053 1.348 006665 -- 0 0 0 +- 1 0 1 ++ 22 21 43 0.011 0.000 0.006 006685 AA 9 20 29 AG 9 1 10 GG 4 0 4 0.414 0.012 3.803 006771 AA 0 1 1 AC 0 2 2 CC 22 18 40 0.000 4.203 9.727 006812 CC 9 20 29 CG 9 1 10 GG 4 0 4 0.414 0.012 3.803 006894 CC 4 0 4 CT 9 1 10 TT 9 20 29 0.414 0.012 3.803 007024 CC 8 19 27 CG 8 1 9 GG 4 0 4 0.556 0.013 4.296 007249 AA 0 0 0 AG 3 0 3 GG 20 22 42 0.112 0.000 0.054 007301 CC 18 14 32 CT 4 7 11 TT 1 1 2 1.252 0.011 0.648 007347 AA 2 1 3 AC 8 7 15 CC 13 14 27 0.221 0.011 0.210 007361 AA 3 13 16 AG 11 8 19 GG 9 1 10 0.016 0.027 0.885 007460 AA 20 21 41 AG 1 0 1 GG 0 0 0 0.012 0.000 0.006 007464 CC 21 19 40 CT 0 2 2 TT 0 0 0 0.000 0.053 0.025 007498 AA 20 21 41 AT 1 0 1 TT 0 0 0 0.012 0.000 0.006 007668 AA 6 14 20 AT 11 8 19 TT 7 1 8 0.160 0.011 0.858 007969 AA 18 15 33 AC 4 7 11 CC 2 1 3 3.840 0.025 2.074 008008 AA 0 0 0 AG 5 0 5 GG 19 23 42 0.324 0.000 0.148 008104 -- 7 1 8 +- 11 8 19 ++ 6 14 20 0.160 0.011 0.858 008230 CC 7 1 8 CT 11 8 19 TT 6 14 20 0.160 0.011 0.858 008241 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 008448 AA 7 1 8 AG 11 8 19 GG 6 14 20 0.160 0.011 0.858 008477 CC 20 23 43 CT 4 0 4 TT 0 0 0 0.198 0.000 0.093 008617 CC 11 1 12 CG 10 8 18 GG 3 14 17 0.094 0.011 2.385 008698 AA 3 14 17 AG 10 8 18 GG 11 1 12 0.094 0.011 2.385 008711 AA 1 0 1 AT 5 0 5 TT 18 23 41 0.644 0.000 2.448 008766 CC 6 14 20 CT 11 8 19 TT 7 1 8 0.160 0.011 0.858 009027 AA 0 1 1 AG 4 6 10 GG 20 13 33 0.198 0.078 0.054 009055 AA 8 1 9 AG 12 6 18 GG 4 12 16 0.020 0.048 0.843 009220 CC 18 19 37 CG 5 0 5 GG 1 0 1 0.644 0.000 2.127 009221 AA 2 1 3 AG 4 6 10 GG 18 12 30 3.840 0.048 2.317 009272 AA 7 1 8 AG 11 6 17 GG 6 12 18 0.160 0.048 1.158 009328 AA 3 12 15 AG 10 6 16 GG 11 1 12 0.094 0.048 2.734 009333 AA 7 1 8 AG 11 6 17 GG 6 12 18 0.160 0.048 1.158 009337 CC 22 19 41 CG 2 0 2 GG 0 0 0 0.045 0.000 0.024 009498 AA 2 1 3 AT 4 6 10 TT 18 14 32 3.840 0.114 2.589 009680 -- 8 14 22 +- 8 8 16 ++ 7 1 8 2.112 0.011 2.504 009866 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 009894 CC 23 22 45 CT 0 1 1 TT 0 0 0 0.000 0.011 0.006 009895 -- 3 14 17 +- 10 8 18 ++ 11 1 12 0.094 0.011 2.385 010630 AA 19 18 37 AG 4 0 4 GG 1 0 1 1.361 0.000 3.341 010872 AA 12 15 27 AT 10 2 12 TT 2 1 3 0.002 3.445 0.964 011087 AA 0 0 0 AG 7 0 7 GG 17 23 40 0.700 0.000 0.304 011208 AA 1 2 3 AG 9 7 16 GG 14 14 28 0.091 0.616 0.120 011266 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 011280 CC 14 12 26 CT 10 10 20 TT 0 1 1 1.662 0.374 1.641 011487 AA 24 21 45 AG 0 2 2 GG 0 0 0 0.000 0.048 0.022 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 006091: cccctgtccccg 006665: a 008104: t 009680: gtt 009895: ag