AQP3 Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

TAAAAAAAAC AAAAAACAAA AAACAAAAAA ATTGGCTGGA CATGGTGGTG 50 | REPEAT | var(42):[G:0.01] CATGCCTGTA ATCCCAGCTA CTCGGGAAGC TGAAGCAGGA GAATCGCTTG 100 | var(63):[T:0.01] AACCCAGGTG GGGTGATCTT GGCTCACTGC AACCTCTGCC TCCTGGGTTC 150 | REPEAT AAGTGATCCT CCTGTCTCAG CCTCCCGAGT AGCTGGGATT ACAGGCATGT 200 GGCAGAGGTG GTTGATGCCC AAAGAGATGG GTTTAGCAAT ACTCATAATC 250 | REPEAT CTACAATCCA AGCACTCTAG GAGGCCAAGG TGGGCAAATT GCTTGAGCTC 300 GGGAGTTCCA GACCAGCCTG GCCAACATGG CGAAACCCCT TCTCTACAAA 350 CAATACAAAA ATTAGCCGGG CATCGTGATG CATGCCTGTA GTCCCAGCTA 400 TTTGAGAGGC TGAGGTGGGA GGATTGTTTG ATCCCATGAG CTAGAGGCTG 450 | var(450):[A:0.07] GAGTGAGTCA TCATCCATGT TTTTAAGAGC TTGTTTAGCT TCTTCTGCTA 500 CCTCTCCTGA CACAACCTGT CCACTTGAAG GGTCCATGCC TATCTGTCCT 550 GAAATGTCAA TGGTCCTGTC ACCTAACATA GTTTGACTGT AGGTCCCAGT 600 GGCCCCTGGG GCTTTCTTGG TGCTGATCAC ATTTCTGATC AAGGACGACA 650 GGACTAACCC TTCTCTCTTT TGGTCCCTCT GGGAGAAGAA CCTCTGCACT 700 AGCCCTGCTC GCTTCTCATT GAACCGTGGG AGCCCTTTTT TTTTTTTTTT 750 | REPEAT TTTTTGAGAT GGAGTTTGGC TCTTGTTGCC CAGGCTGGAG TGCAATGGCA 800 TGATCTCAGG TCACTGCAAC TTCCGCCTCC TGGGTTCAAG TGATTCTCCT 850 | var(834):[A:0.02] GCCTCAGCCT CCCGAACAGC TGAGATTACA GGCACCCGCC ATCACGCCCG 900 GCTAATTTTT GGTATTTTTA GTAGAGACAG GGTTTCACCA TGTTGGTCAG 950 TGTGGTCTTG AACTCCTGAC CTCAGGTGAT CTGCCCGCCT CGGCCTCCCA 1000 | var(991):[T:0.03] AAGTGCTGGG ATTATAGGCG TGAGCCACCA CGCCCAGCCG GGGGCCCTTA 1050 TTTCTCATAT TCGTCCCTCA AGGGACAAGT CCTCAGGGTC ATTAGCCCAC 1100 CTGGATTAAG TCCCTCTGGA AAATGATTTC TTTGATCTCC TCTGGCAATG 1150 CTGCCATAGA AGCTCAGCCT AAGGGCATGT TGTTTGCTCC CAGGCCACCA 1200 GATGTTTCCT TGTTATTAAA AGCAGCATAG AGGGCAAGGT TGCACTTCGG 1250 | REPEAT GAGGCCGAGG TGGGAGGATC GTTTAAAGCC AGGAGTTTGA GACTAACCTG 1300 GGCAACATAG CAAGACCTCA TTTTTACAAC AGATTTTTAA AAATTAGCTG 1350 AGTGTCATGG TGGCACATAG TCCCTATAGT CCCATCCATT CTGGAGGCTG 1400 AGGTGGGAGG ATCACTTGGG CCCAGGAGTT CGAGGCTACA GTGAGCTGTG 1450 | var(1443):[A:0.14] ATTGCACCAC AGCCTGGGTG ATGGAGCAAG ACCCTACTCT TTAAAAAGAG 1500 AGAGAGGGCA AGGTTGTCCC ATGATCCCCC TCAGATAGGG CTGACTCCCC 1550 CATAATTAAG TTTGCTTAAA GAGGCAGACT TGCTGGGCTC AGTGGCTCAC 1600 | REPEAT GCCTGTAATC CCAGCACTTT GGGAGGCTGA GGCGGGTGGA TAACTTGTGG 1650 TCAGGAGTTC GAAATCAGCC TGGTCAACAT GGTGAATCCC CATCTCCACT 1700 | NOT SCANNED AAAAAAACAA AAATTAGCTG GGCATGGTGG TGTGCACCTG TAATCCCAGC 1750 TAATCGGGAG GCTGAAGCAG GAGAATCACT TGAACCTGGG AGGTGGAGGT 1800 TGCAGGGAGC CGAGATCACG CCATTGCACT CCACCTAGGC GACAGAGAGA 1850 GACTCCGTCT AAAAAAAAAA AAGAGACAGA CTCTTCCTTG GCTGGGGGTA 1900 AGTCAGATGG GAGAGGAGAG GGTTAAAAAC AGCTGGGACT CAGCCTGCTG 1950 GCAAACATGT GGCATGTGGC ATGTCGGGGC AACTGCAGCT CAGCCTCTGG 2000 AGCCATGTGA GCAATGCACG CAGGTACACG TGTGACAAGC TAGGTCACCT 2050 AGCCATGTTC AACAGGCATG TGCACAGCCA CGAGGAATGC CCAGCCGTAC 2100 AATTAGGCAC ACAGGACATC CGCCATGTGT AGACACAGCT GTGGACATAG 2150 CTGGCCAGGA CATGCGACAC ACGACGTGCT CATAGCACAG GGAGAAGGGC 2200 CCATGAAGTC TGGTTGGAAC TCAGCACGTG TGTCTGTGTG CCCACCTGAG 2250 TCTGGACTGC TGCCCCTCTG ACACTAGCTG TCCCCTTGAA GGGTCGGTGC 2300 CTTATCTGTC CTGACAGAAG AGACAGTGTT GCTTCTCACT TGGGGCTCGC 2350 AGCCTCCTCC TCCTGCCTCG AACTGAGGAT CTGTTGGGTC CAGTCATCCT 2400 | var(2395):[T:0.01] GGAGAGATGC GGCCAGTTTC TTTCTGACAG GTCTCCTCCT GCCCGCAAGG 2450 AAGTGGGGTG ATCACAGGGC GCAGGTGGTC TCTATGACAG CTGCATCCTC 2500 | var(2487):[T:0.03] TCCAGCCATG GCCCTGAACC CTGCCTATAA TCCCACCATT GGCTCTCAGA 2550 TCTGCCTAAG CCTCTCAGCC CCCTTGACGT CCCCTCCCTT AAGCGCCCTC 2600 | var(2578):[A:0.03] CGAAGGCCAC CCGTCCCTCA AAGCTCCTCA CACTCCATGC CCGCAGCTCC 2650 CTCCACCCGG CGTCCGCACC AGCCTCCCAG CCGAGGTGGG GCGGGGGCGA 2700 GGGGGCGCGC ACTCCTCGGC GCTCCGGGAC TGCAGGGCGG GGCTGCAGGG 2750 CGGGCGGGGC CCGTGTCTCC AGCGCTCCTA TAAAGGGAGC CACCAGCGCT 2800 GGAGGCCGCT GCTCGCTGCG CCACCGCCTC CCGCCACCCC TGCCCGCCCG 2850 | Exon 1 | UTR | var(2823):[G:0.39] | var(2849):[T:0.01] ACAGCGCCGC CGCCTGCCCC GCCATGGGTC GACAGAAGGA GCTGGTGTCC 2900 | var(2855):[A:0.02] M G R Q K E L V S 9 CGCTGCGGGG AGATGCTCCA CATCCGCTAC CGGCTGCTCC GACAGGCGCT 2950 R C G E M L H I R Y R L L R Q A L 26 GGCCGAGTGC CTGGGGACCC TCATCCTCGT GGTGAGTGGA GGGAGCCGGG 3000 | var(2978):[G:0.22] A E C L G T L I L V 36 GAAGCCCTTC TCTCTCCAGC CCTTGCACTC CCCAAACTCT CACTTCCCCG 3050 AAGGGGCTGT GTTTTCCAAG GTAGCCTGGA CCCACCTCCC CAGCTCTGAC 3100 | var(3096):[G:0.24] CCCCACGCTT AACCGCGGAG GATCAAGCTG ACTTCCAAAG TCCTCTTCCC 3150 CACGGTTCTA ACCCCCTCTC TGACAGCTCC GACTCTTGCC AGAATGACAG 3200 CTGTTACTCC CCAGTGATAG TGCCGATCGT TTACCCTCCC ACAAGTGACT 3250 | var(3205):[C:0.03] CAGCCAACAG GCTGGGGGCA GCGGTCACGC TTGCAGTCTG GGACAGCCAG 3300 CCACTTCCCC TGCCTCCCAC ACCCCTCCAG ATTCCCAGAA TCCCAGCCCC 3350 CAGATGTAGG GGAGGGGGCG GAGGCAAATG AGCCATTATT AGGTTATTTG 3400 GGTCCTGGGT GTCTGGCCTC TAATGAATAA TTAAGCCTCA AAAAGTCCAA 3450 AGGTTGAAGT GAGTGAGGAC AGTTTGCACG AGTGGGGGCA GAGGGTGCAG 3500 GCCACATGGG CTGCGAACAG CGAAGTGGGA AGGGAGGCAG ATTCTGACGG 3550 TAGAAGGGTG GGAGGAAGCT AGGCCCAGGC ACAGAGGACG CGTGTCTAAA 3600 GTTGCTCACC TGGTGCTCAG CGACTCCCAG GCCCTGTCTG TTATCCAGAC 3650 AGATGCTGTC AGCGTCTGTG CAGAAGACGA CAAGCATTCT GGTTACTCCC 3700 TGGCCTCTTG GTTACTCTGT GGGTTCTCTG AGTGAGCATT TCCCTGCCTG 3750 AGTTACTCCT CAGTCCTAGT TACTCCTTGG TCACACCAGT TTCACCCTGG 3800 TTTTGTTCTG AGTGACTCTG TTTGCACTTC TTAGGTCTGG CAGACCCACC 3850 | var(3835):[T:0.02] AGTTATGTTC TATTTCCTGT CCCAGTTACT CTGATTTTTC AGCCGCTCAT 3900 GTGGTTACAC CTGTTTTCCT CTGTGTTCAG TTGCTACATT GCAGTGAGTG 3950 | var(3916):[C:0.03] GGTTACTCCG TTCCTGCCCC AGCCCTGGGT AGTACAGACC AGCTGGCCCA 4000 CTGTGGACTA GGAAGCCTAA CTAAGGGCAA GTAGGGATCC CCAAATGGTT 4050 GAGGATCAGG ATCTATGGGC AGAGGAGGGC TGAAACCCAC TTCTGGCTTC 4100 CAAGAATAGG AAGTGGGGAA GCCACAGGGG GCATTTTATC CACAGCCTCC 4150 CATAAGATTA GTCGTCCTAT CAGCCAGCCC TAGCCCCTCT CTCCTGTGCC 4200 AAGAAGGCAA TAGGAGGTGG CCTTTATCAC TCTCCTGCCT CGGAGCCCTC 4250 | var(4234):[A:0.01] ACTCCTATCG GAGTCCTGAG TCCAGCCACC TGTTTTAGAG CAGCCAGGCT 4300 | var(4272):[A:0.01] AGGGGAGGAT GATGTCTTCT ATTTTCCTAG AGGGGCCTCC TCATTCCCTC 4350 CCAAGTCTCA GTTCACTCTC TCACAAAGGA GCCGTTAGTC CTCCCACTGA 4400 GCCCCAGGAT CATCAGGCTT ATCCCAGACC ACAAAAGAAG AGTGTTAAAT 4450 TTTAGGGGAA GGGTTGCAGA CTCAGATGGA TGTGAGGTAT TGGATATCAG 4500 TGAGAAGCAG AACTTCAAGG ACTGCATGAA CTGGAGGGGC AGGCCTGGGG 4550 ATCCCTTTGT AGTGGGTGAG TGCCTGCCTG CCTACCTGCG TGTTGGGAGC 4600 CTAGGCCTGC AGTGGCAGAA TCAGGGTTGG CTTTGGGGTG AGGAAAGCCC 4650 CTTTCTCTGA GATACCTGGT GTGAGGGCAG GGGGCGGTGC TGGCCGAGAA 4700 | var(4686):[A:0.01] CTCAGGGCAG GGGTTGGGGG AGGAAGAGGA AGATTAGCCC CAAGGTGGTG 4750 GAACTGGCTC TGACAGCTCC TCCCTCCAAG GCGTCCTGGG ATGGAGCCAG 4800 GTCTGAGCCT TTGGCAGGCA AGGAGCTGCT GCCAGGGCCT CCCAAGCAGG 4850 GCAGGGCGCC TCAGACCCTC ACGTGCCTGT CTCCCACCAC CCCTCCTCAC 4900 ACATACACCT GCAATCTCTG ATCTTTGCTC TCACCTGCCT GCACACCTTT 4950 GCCCCATGTC ATTGCCGCTG GCTTCTCCGT TATCTCTTGG TCTTTCTGGG 5000 ATGATAATCA AAATGCTTAA CTATCCAGTA CAACAGGCAC TGACCCGTCA 5050 GAATAAACAA GGTCTGTAGC ACAGGTCCTG GAAACTGCCT GCTCTGTGGG 5100 CATAAAACCT TTAGTTATGG GCAGGTGGGA GAGGAGACCA GGGCAAGGCA 5150 TTGGAGCAGC TTTGAGGGAC ACTCAGGGGG CTCAGGGCAA CAATGCTTTA 5200 CAGCTGCTGC AGAAGTATTT TCAGGCTTGA ACAAGGGGAA CAGACATAGT 5250 ACGTTCTTTT TCTTTTTTAA ATAGAGACAA AGTCTCACTA TGTTGCCCAG 5300 | REPEAT GCTGTTCTCA AACTCCTGGG TTCAAGATCC TCCCATCTCA GCCTCCAAAG 5350 TGCTGGGATT ACAGGTGTGA GCCACCACAG CTGGCTCCAG TATGTTCTAT 5400 ATTTGTAGAA CACCAGGGCT CTTAGTCTCT TTTAGTTCCC CCATTTTTGG 5450 CAGAAAGTTT AGAACCGATC TCCCCATTTC TACAGCCCTG GGTCCCGGGC 5500 TGGGGATAGT GAGAGGAGCC ACACAGATCC CTGTCTGTAG GACCTCCAAA 5550 | var(5541):[A:0.33] TCTGAGTGGG GAATCTGGAC CCCTGAGAGC AGAGAGGTCA TGGGTGGAGA 5600 GAGGAGACGC TGGGACAGGG ACAGGTAAAG GAAGGGGAGG TTGCTGAGGG 5650 | var(5644):[T:0.40] GGACATGGTG AAGGCTGGGG CTCTGGCATC CTGGACTCAG GAGAAGTGGA 5700 TTCAACCTCA CTTCTGGTCT CCTCCCTATT TATTTATGCC GCCCATTGCC 5750 ACCACTACCA CCACCACATG AGCTTTTCTT TTCAACTCTT TTTTTTTTTT 5800 | REPEAT TTTTGAGATG GAGTCCCGCT CTGTCGCCCA GGCTGAAGTG CAGTGGCGCA 5850 ATCTTGGCTC ACTGCAACAT CTGCCTCCCA TTTTCAAGTG ATTCTCCTGC 5900 CTCAGCCTCC CGAGTAGCTG GGATTACAGG CACCTGCCAC CACGCCTGGC 5950 TAATTTTTGT ACTTTTAGTA GAGATGGGGT TTCACTATGT TGGCCAGGCT 6000 GGTCTCAAAC TCCTGACCTC AGGTGATCCA CCCACCTCGG CCTACCAAAG 6050 TGCTGGGATT ACAGTGTGAG CCACTGCACC GGGCCTACAT GAGCTTTTCT 6100 TTGGGGCAGC TGGGGGATGA GTGAGAGGCT TCCCACCTTT ATGGTCCAGG 6150 CCTGAAGGGC TGTGGAGAAA CTTGTGCTAA GGTGAAAGCT GTTCCCCTAC 6200 ACCTACGCCT GCTGAAATTC AAGGAAAATC AGTGAAGATG GTTCAGTCAT 6250 CTTCTAGGAT CCCAGTCGCA GACCCTGCTT CCAGCCCTTT CCATAGGGCC 6300 CTCTCATATT AGAGTTGGGA CAGTGGGGTG GGAAGGCATG TGTCCTTTTT 6350 | var(6326):[T:0.01] CTGGAAAGTG CAATTACAGC AGAAGGGGTT TGGGCTGGGT TCCAGGAAGC 6400 GCCTCTAGTC CTCCCAGTGG TGGCGAGTGG GCATGTTGCT GGCTTCACCC 6450 | var(6402):[G:0.18] CTTCCTTCTG GAGTGAGAGT TGCTGGTCCT CACCCTCCCT GCCTGTTCTT 6500 CTTCCTGACA GATGTTTGGC TGTGGCTCCG TGGCCCAGGT TGTGCTCAGC 6550 | Exon 2 | var(6530):[A:0.01] M F G C G S V A Q V V L S 49 CGGGGCACCC ACGGTGGTTT CCTCACCATC AACCTGGCCT TTGGCTTTGC 6600 R G T H G G F L T I N L A F G F A 66 TGTCACTCTG GGCATCCTCA TCGCTGGCCA GGTCTCTGGT AAGGCCTTAA 6650 V T L G I L I A G Q V S 78 CCCTGCCCCC AGCCCTTGGC CCTCAATAGC ATTCCCACTA GGTGTCCTGG 6700 CATTCCTAAG GGCAGGTCAC AGCTGTGGCC TCTGCTTTGG CCCCTTGGGA 6750 AAGGAGGGTG GAGAAGAAAC TTGACACTTA GAACTTTCGA CTCTCACCTT 6800 GGAATCAGAG ATTATCAGCT GACCTGTTAC ATAGACCAAC CGCCATCCTG 6850 | var(6810):[T:0.01] TGCAAGAAAC CCCTCTCTGC ACCCCTTCTC AGGGGACCCT AGCCTGCCGA 6900 CTGTGGCAGG CTGCAGCTAA TAGGTCCCTT GTCCCCTCTG CCCAGGGGCC 6950 | Exon 3 G A 80 CACCTGAACC CTGCCGTGAC CTTTGCCATG TGCTTCCTGG CTCGTGAGCC 7000 H L N P A V T F A M C F L A R E P 97 CTGGATCAAG CTGCCCATCT ACACCCTGGC ACAGACGCTG GGAGCCTTCT 7050 W I K L P I Y T L A Q T L G A F 113 TGGGTGCTGG AATAGTTTTT GGGCTGTATT ATGGTAAGCA TTCCCCACCC 7100 L G A G I V F G L Y Y 124 TGTCCTCCTC CACTACCCCC GTCCCTCTGT TCAGGACCTG CTGGCACCAG 7150 GCCTTTTGAT GACAGACGGC TAGGACCTGC CCAGGCCCCG GGCTCATGAC 7200 TCACTCATTC ACGCACAGGG TCAAGGTAGG GGGCACGAAG GGAAAGAAAC 7250 | var(7242):[A:0.01] AAGTTGGGCA ATAACAGAGT CTCAGGCCCT CCACCCCACC CCACGCCACC 7300 | var(7296):[T:0.10] CCCTCTGCCT GCTGCAATAC AGCAGTATTG CTACTTACCC ATAACTCATG 7350 GGAGGGTGGG GAGGGCACAC CTGAGAGGGA AGTCTGGGCT CAGGCCTCTC 7400 | var(7371):[G:0.04] CCCCGACTCA CTGTGGGTCT AATCTGTCAC CAGATGCAAT CTGGCACTTT 7450 | var(7416):[T:0.28] | Exon 4 | var(7450):[C:0.26] D A I W H F 130 GCCGACAACC AGCTTTTTGT TTCGGGCCCC AATGGCACAG CCGGCATCTT 7500 A D N Q L F V S G P N G T A G I F 147 TGCTACCTAC CCCTCTGGAC ACTTGGATAT GATCAATGGC TTCTTTGACC 7550 A T Y P S G H L D M I N G F F D 163 AGGTATGGGC TGGGGACGTG TGAGGGGAAC GCAGGGAGGG GACCGAGTTG 7600 | var(7594):[T:0.01] Q 164 CCTTGGTAGC TCATGGGCTG GTTGGGGGAC AGGACTCCTC GACTGTAGCA 7650 GGGTTTCTCC AATCTGTGGG GTAACCCGCA TCAGAACATG GTGGCAAGTA 7700 CTTACAAAAC ATGCGGCTCT CCAGCGGGTT CTTGTCACGC AGACATTCTA 7750 | var(7705):[T:0.01] GCACCATTGC TTTCAGGAGA AGAGCATGGG CGGGCGCTGA CAAGAGTTTA 7800 | var(7771):[C:0.01] AGAGCTAGAG GGAAGACGGG GGATGGAAGG AGGGGTCAGA GAAAGGGAGG 7850 GAGCTGCAGC TCACCCTGTT CTCCCCACTC CCCAGTTCAT AGGCACAGCC 7900 | Exon 5 F I G T A 169 TCCCTTATCG TGTGTGTGCT GGCCATTGTT GACCCCTACA ACAACCCCGT 7950 S L I V C V L A I V D P Y N N P V 186 CCCCCGAGGC CTGGAGGCCT TCACCGTGGG CCTGGTGGTC CTGGTCATTG 8000 P R G L E A F T V G L V V L V I 202 GCACCTCCAT GGGCTTCAAC TCCGGCTATG CCGTCAACCC TGCCCGGGAC 8050 G T S M G F N S G Y A V N P A R D 219 TTTGGCCCCC GCCTTTTTAC AGCCCTTGCG GGCTGGGGCT CTGCAGTCTT 8100 F G P R L F T A L A G W G S A V F 236 CACGTGAGTA CAGCCCCCAC CCAGCTCACC CCAGCCTGCC TCTCCTCTGC 8150 | var(8130):[T:0.03] T 237 CCTGCCCCCC ATGTCCCTGA CTATGAGTGT CTGTCCCCCC AGGACCGGCC 8200 | Exon 6 T G 239 AGCATTGGTG GTGGGTGCCC ATCGTGTCCC CACTCCTGGG CTCCATTGCG 8250 Q H W W W V P I V S P L L G S I A 256 GGTGTCTTCG TGTACCAGCT GATGATCGGC TGCCACCTGG AGCAGCCCCC 8300 G V F V Y Q L M I G C H L E Q P P 273 ACCCTCCAAC GAGGAAGAGA ATGTGAAGCT GGCCCATGT