Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000190 00000 ------------ C 0.93 0.80 0.86 T 0.07 0.20 0.14 0000 --- --- --- --- 000247 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000260 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 000337 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000916 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001054 00000 ------------ A 0.57 0.74 0.65 G 0.43 0.26 0.35 0000 --- --- --- --- 001062 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001175 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001178 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001262 00000 ------------ G 0.83 0.97 0.89 A 0.17 0.03 0.11 0000 --- --- --- --- 001277 00000 ------------ - 0.89 1.00 0.94 + 0.11 0.00 0.06 0000 --- --- --- --- 001399 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001419 00000 ------------ G 0.83 0.69 0.77 T 0.17 0.31 0.23 0000 --- --- --- --- 001449 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001474 00000 ------------ G 0.83 0.72 0.78 C 0.17 0.28 0.22 0000 --- --- --- --- 001505 00000 ------------ G 0.89 0.69 0.80 C 0.11 0.31 0.20 0000 --- --- --- --- 001661 00000 ------------ T 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 001999 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 002120 00000 ------------ T 0.80 0.96 0.88 C 0.20 0.04 0.12 0000 --- --- --- --- 002174 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002192 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002221 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002252 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 002307 00000 ------------ C 0.58 0.46 0.51 T 0.42 0.54 0.49 0000 --- --- --- --- 002342 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002397 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 002567 00000 ------------ C 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 002646 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002690 00000 ------------ A 0.63 0.65 0.64 G 0.37 0.35 0.36 0000 --- --- --- --- 002704 00000 ------------ A 0.72 0.63 0.67 G 0.28 0.37 0.33 0000 --- --- --- --- 002711 00000 ------------ - 0.33 0.52 0.42 + 0.67 0.48 0.58 0000 --- --- --- --- 002780 00000 ------------ C 0.76 0.89 0.82 T 0.24 0.11 0.18 0000 --- --- --- --- 002838 00000 ------------ G 0.76 1.00 0.88 C 0.24 0.00 0.12 0000 --- --- --- --- 002853 00000 ------------ C 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 002873 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 002895 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002922 00000 ------------ T 0.74 0.65 0.70 C 0.26 0.35 0.30 0000 --- --- --- --- 002941 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 003045 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 003051 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 003190 00000 ------------ C 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 003223 00000 ------------ G 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 003357 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003367 00000 ------------ G 0.65 0.63 0.64 A 0.35 0.37 0.36 0000 --- --- --- --- 003396 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003403 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003408 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003503 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 003534 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 003678 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 003847 00271 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0090 GAC CAC ASP(D) HIS(H) 003888 00312 NON-SYN C 0.94 1.00 0.97 G 0.06 0.00 0.03 0103 AAC AAG ASN(N) LYS(K) 003924 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 004093 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004312 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004733 00617 NON-SYN G 0.94 1.00 0.97 A 0.06 0.00 0.03 0205 CGG CAG ARG(R) GLN(Q) 004897 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 004898 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004962 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005081 00762 SYNON C 0.65 0.76 0.71 T 0.35 0.24 0.29 0253 TTC TTT PHE(F) PHE(F) 005280 00000 ------------ C 0.35 0.74 0.54 T 0.65 0.26 0.46 0000 --- --- --- --- 005331 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005358 00000 ------------ A 0.35 0.74 0.54 G 0.65 0.26 0.46 0000 --- --- --- --- 005408 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 005424 00000 ------------ G 0.52 0.76 0.64 A 0.48 0.24 0.36 0000 --- --- --- --- 005436 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005598 00000 ------------ A 0.74 0.36 0.56 G 0.26 0.64 0.44 0000 --- --- --- --- 005599 00000 ------------ A 0.74 0.33 0.55 C 0.26 0.67 0.45 0000 --- --- --- --- 005641 00000 ------------ A 0.74 0.34 0.54 G 0.26 0.66 0.46 0000 --- --- --- --- 005994 00000 ------------ C 0.93 0.87 0.90 T 0.07 0.13 0.10 0000 --- --- --- --- 006286 00000 ------------ C 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 006364 00000 ------------ G 0.63 0.37 0.51 A 0.37 0.63 0.49 0000 --- --- --- --- 006373 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 006686 00000 ------------ C 0.75 0.39 0.57 T 0.25 0.61 0.43 0000 --- --- --- --- 006968 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 007249 00000 ------------ G 0.70 0.38 0.55 A 0.30 0.62 0.45 0000 --- --- --- --- 007270 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007283 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007470 01047 SYNON C 0.94 1.00 0.97 A 0.06 0.00 0.03 0348 CGC CGA ARG(R) ARG(R) 007682 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007718 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 007784 00000 ------------ C 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 007785 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008084 00000 ------------ A 0.70 1.00 0.84 G 0.30 0.00 0.16 0000 --- --- --- --- 008141 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 008436 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008476 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008498 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008942 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009002 00000 ------------ G 0.67 0.40 0.55 C 0.33 0.60 0.45 0000 --- --- --- --- 009057 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009080 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 009420 00000 ------------ T 0.89 0.88 0.88 A 0.11 0.12 0.12 0000 --- --- --- --- 009429 00000 ------------ C 0.89 0.87 0.88 G 0.11 0.13 0.12 0000 --- --- --- --- 009461 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009485 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009809 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 010209 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010400 01458 SYNON A 1.00 0.78 0.89 G 0.00 0.22 0.11 0485 ACA ACG THR(T) THR(T) 010893 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011228 00000 ------------ G 0.63 0.60 0.62 A 0.37 0.40 0.38 0000 --- --- --- --- 011238 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011256 00000 ------------ C 0.63 0.60 0.62 T 0.37 0.40 0.38 0000 --- --- --- --- 011340 01695 SYNON C 0.91 1.00 0.95 T 0.09 0.00 0.05 0564 CCC CCT PRO(P) PRO(P) 011507 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011807 02053 3' UTR T 0.78 0.70 0.74 C 0.22 0.30 0.26 0000 --- --- --- --- 012033 02279 3' UTR C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 012056 02302 3' UTR - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 012114 02360 3' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012286 02532 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012530 00000 ------------ A 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012632 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012756 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 012799 00000 ------------ A 0.84 0.97 0.90 T 0.16 0.03 0.10 0000 --- --- --- --- 013266 00000 ------------ C 0.82 0.88 0.85 T 0.18 0.12 0.15 0000 --- --- --- --- 013394 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000337: AAAG 001277: TG 002252: AA 002711: GA 012056: GG 012114: GTT