Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000386 -- 7 10 17 +- 6 9 15 ++ 8 4 12 3.834 0.591 4.208 000864 CC 23 21 44 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 001138 -- 15 23 38 +- 8 0 8 ++ 1 0 1 0.003 0.000 0.516 001158 CC 8 2 10 CG 2 11 13 GG 6 10 16 8.905 0.179 3.923 001440 AA 0 1 1 AG 2 8 10 GG 22 14 36 0.045 0.011 0.094 001586 AA 0 0 0 AC 1 0 1 CC 23 23 46 0.011 0.000 0.005 001649 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 001661 CC 8 8 16 CT 10 11 21 TT 5 4 9 0.306 0.004 0.196 001764 AA 1 5 6 AG 6 8 14 GG 15 10 25 0.153 1.675 2.653 002102 CC 1 0 1 CG 5 0 5 GG 18 23 41 0.644 0.000 2.448 002172 CC 8 4 12 CT 8 9 17 TT 8 10 18 2.667 0.591 3.291 002180 CC 0 0 0 CG 1 0 1 GG 23 23 46 0.011 0.000 0.005 002274 CC 18 23 41 CT 5 0 5 TT 1 0 1 0.644 0.000 2.448 002619 AA 0 2 2 AG 2 7 9 GG 21 14 35 0.048 0.616 1.727 002902 CC 18 16 34 CT 1 2 3 TT 0 0 0 0.014 0.062 0.066 002905 CC 3 2 5 CT 7 7 14 TT 11 9 20 1.018 0.126 0.966 002926 CC 16 18 34 CT 5 0 5 TT 0 0 0 0.383 0.000 0.183 002987 GG 11 9 20 GT 7 7 14 TT 3 2 5 1.018 0.126 0.966 003388 CC 4 4 8 CT 9 9 18 TT 9 9 18 0.414 0.414 0.829 003480 CC 17 17 34 CT 5 0 5 TT 1 0 1 0.571 0.000 1.887 003604 -- 23 15 38 +- 1 6 7 ++ 0 1 1 0.011 0.153 0.875 003665 CC 4 4 8 CT 10 9 19 TT 10 9 19 0.296 0.414 0.705 003896 AA 21 16 37 AG 2 0 2 GG 0 0 0 0.048 0.000 0.027 004216 AA 0 4 4 AG 3 6 9 GG 21 12 33 0.107 3.035 5.654 005003 CC 0 1 1 CT 1 6 7 TT 22 15 37 0.011 0.153 0.830 005158 AA 0 0 0 AG 1 0 1 GG 23 22 45 0.011 0.000 0.006 005287 AA 11 9 20 AG 8 9 17 GG 3 4 7 0.577 0.414 1.035 005304 AA 3 4 7 AG 8 9 17 GG 11 9 20 0.577 0.414 1.035 005354 AA 21 16 37 AT 1 5 6 TT 0 1 1 0.012 0.499 1.348 005431 AA 3 4 7 AG 8 9 17 GG 10 9 19 0.429 0.414 0.873 006036 CC 0 0 0 CT 1 0 1 TT 21 22 43 0.012 0.000 0.006 006081 AA 10 10 20 AG 8 8 16 GG 4 4 8 1.010 1.010 2.020 006336 CC 22 20 42 CG 0 2 2 GG 0 0 0 0.000 0.050 0.024 006488 AA 5 5 10 AG 10 10 20 GG 8 8 16 0.306 0.306 0.612 006542 CC 1 0 1 CT 5 0 5 TT 17 23 40 0.571 0.000 2.368 006807 CC 4 4 8 CT 8 9 17 TT 11 10 21 1.252 0.591 1.780 007090 AA 15 8 23 AG 6 9 15 GG 2 5 7 1.252 0.609 2.525 007092 CC 1 4 5 CG 7 8 15 GG 15 10 25 0.025 1.010 1.289 007244 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 007478 AA 15 10 25 AG 7 9 16 GG 1 4 5 0.025 0.591 0.930 007605 GG 9 10 19 GT 9 9 18 TT 4 4 8 0.414 0.591 1.001 007746 CC 0 0 0 CT 3 0 3 TT 20 23 43 0.112 0.000 0.052 007902 CC 17 17 34 CT 3 4 7 TT 0 0 0 0.131 0.233 0.357 008168 CC 11 10 21 CT 9 9 18 TT 4 3 7 0.780 0.177 0.870 008187 CC 11 10 21 CT 9 9 18 TT 4 3 7 0.780 0.177 0.870 008328 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 008429 CC 0 0 0 CT 0 1 1 TT 24 21 45 0.000 0.012 0.006 008630 -- 4 3 7 +- 9 9 18 ++ 11 10 21 0.780 0.177 0.870 009013 GG 1 0 1 GT 6 0 6 TT 16 23 39 0.195 0.000 1.467 009115 AA 22 18 40 AG 1 5 6 GG 0 0 0 0.011 0.342 0.224 009116 CC 3 2 5 CG 8 8 16 GG 12 13 25 0.733 0.221 0.930 009489 AA 3 2 5 AG 7 7 14 GG 10 14 24 0.818 0.616 1.566 009546 CC 13 23 36 CT 6 0 6 TT 1 0 1 0.078 0.000 1.288 009615 AA 3 2 5 AG 8 8 16 GG 13 13 26 0.897 0.221 1.048 010764 AA 13 15 28 AG 5 7 12 GG 2 1 3 1.604 0.025 1.058 010901 -- 16 15 31 +- 5 7 12 ++ 2 1 3 2.200 0.025 1.348 011027 AA 19 15 34 AC 2 1 3 CC 0 0 0 0.053 0.017 0.066 011449 AA 0 1 1 AG 2 7 9 GG 22 15 37 0.045 0.025 0.253 011763 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 011924 * 011925 CC 3 0 3 CG 4 0 4 GG 17 23 40 5.874 0.000 14.341 012384 AA 21 14 35 AG 2 6 8 GG 0 1 1 0.048 0.114 0.418 012516 CC 0 0 0 CG 1 0 1 GG 22 21 43 0.011 0.000 0.006 012619 CC 21 22 43 CT 2 0 2 TT 1 0 1 4.959 0.000 10.478 012754 AA 19 23 42 AG 3 0 3 GG 2 0 2 5.958 0.000 13.551 012757 GG 2 1 3 GT 6 7 13 TT 16 15 31 1.407 0.025 0.954 012764 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 013137 CC 24 22 46 CT 0 1 1 TT 0 0 0 0.000 0.011 0.005 013534 CC 5 6 11 CG 14 13 27 GG 5 4 9 0.667 0.445 1.072 013759 AA 23 23 46 AT 1 0 1 TT 0 0 0 0.011 0.000 0.005 014237 AA 0 0 0 AG 0 4 4 GG 23 19 42 0.000 0.209 0.095 015098 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 015114 CC 5 4 9 CG 14 13 27 GG 5 6 11 0.667 0.445 1.072 015166 CC 21 23 44 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 015513 CC 19 17 36 CT 0 1 1 TT 1 0 1 20.000 0.015 16.202 015592 AA 2 0 2 AG 2 0 2 GG 16 18 34 7.389 0.000 15.472 016198 AA 0 0 0 AG 4 5 9 GG 20 18 38 0.198 0.342 0.527 016401 CC 24 21 45 CT 0 2 2 TT 0 0 0 0.000 0.048 0.022 016886 CC 17 15 32 CT 5 7 12 TT 2 1 3 2.400 0.025 1.447 017079 CC 22 21 43 CT 2 0 2 TT 0 0 0 0.045 0.000 0.023 017316 CC 17 13 30 CT 5 7 12 TT 2 1 3 2.400 0.002 1.250 017594 AA 21 11 32 AG 3 7 10 GG 0 4 4 0.107 1.875 4.401 017628 CC 23 22 45 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 017947 CC 5 4 9 CG 14 12 26 GG 5 6 11 0.667 0.220 0.809 017965 AA 0 0 0 AC 0 1 1 CC 24 21 45 0.000 0.012 0.006 017979 AA 22 15 37 AG 2 6 8 GG 0 1 1 0.045 0.153 0.483 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 000386: C 001138: T 003604: T 008630: T 010901: A Tri-allelic sites: Site Genotype AD-pop ED-pop Total-pop 011924 CC 3 3 6 011924 CG 0 0 0 011924 CT 7 1 8 011924 GG 2 1 3 011924 GT 4 3 7 011924 TT 8 15 23