Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000203 CC 0 0 0 CT 4 0 4 TT 17 21 38 0.233 0.000 0.105 000375 CC 16 21 37 CT 5 0 5 TT 0 0 0 0.383 0.000 0.168 000759 AA 0 0 0 AG 12 0 12 GG 9 21 30 3.360 0.000 1.167 001215 AA 0 0 0 AG 1 0 1 GG 21 23 44 0.012 0.000 0.006 001361 CC 21 22 43 CG 3 0 3 GG 0 0 0 0.107 0.000 0.052 002578 CC 10 23 33 CG 13 0 13 GG 1 0 1 1.630 0.000 0.046 002783 AA 0 0 0 AG 3 0 3 GG 16 23 39 0.140 0.000 0.058 003121 CC 18 23 41 CT 1 0 1 TT 0 0 0 0.014 0.000 0.006 003147 CC 19 21 40 CT 0 2 2 TT 0 0 0 0.000 0.048 0.025 003243 AA 0 0 0 AG 1 2 3 GG 18 21 39 0.014 0.048 0.058 003268 AA 0 0 0 AG 1 2 3 GG 18 21 39 0.014 0.048 0.058 003520 -- 23 23 46 +- 1 0 1 ++ 0 0 0 0.011 0.000 0.005 003994 CC 0 0 0 CT 1 0 1 TT 23 23 46 0.011 0.000 0.005 004206 AA 2 20 22 AG 12 3 15 GG 10 0 10 0.375 0.112 4.729 004460 CC 22 23 45 CT 2 0 2 TT 0 0 0 0.045 0.000 0.022 008873 -- 1 0 1 +- 11 1 12 ++ 11 22 33 0.741 0.011 0.006 009045 CC 0 0 0 CT 3 0 3 TT 21 23 44 0.107 0.000 0.051 009056 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 009480 GG 0 0 0 GT 1 0 1 TT 23 23 46 0.011 0.000 0.005 009624 CC 1 0 1 CG 2 0 2 GG 21 23 44 4.959 0.000 10.729 010017 GG 9 23 32 GT 10 0 10 TT 5 0 5 0.490 0.000 6.257 010894 CC 0 0 0 CT 1 0 1 TT 23 23 46 0.011 0.000 0.005 010989 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 011204 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 011781 AA 0 0 0 AG 1 2 3 GG 23 21 44 0.011 0.048 0.051 011834 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 012714 CC 21 23 44 CG 3 0 3 GG 0 0 0 0.107 0.000 0.051 013119 CC 20 23 43 CT 2 0 2 TT 0 0 0 0.050 0.000 0.023 013679 CC 22 16 38 CT 0 5 5 TT 0 0 0 0.000 0.383 0.164 013832 AA 0 0 0 AG 1 0 1 GG 21 21 42 0.012 0.000 0.006 014160 GG 1 12 13 GT 7 1 8 TT 5 0 5 0.467 0.021 2.667 014219 AA 0 0 0 AG 1 0 1 GG 12 13 25 0.021 0.000 0.010 014482 CC 21 21 42 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 015073 GG 1 0 1 GT 10 1 11 TT 13 22 35 0.296 0.011 0.015 015127 AA 0 0 0 AC 2 0 2 CC 22 23 45 0.045 0.000 0.022 015166 CC 1 20 21 CG 6 3 9 GG 17 0 17 0.240 0.112 17.732 015272 AA 0 22 22 AG 12 1 13 GG 10 0 10 3.094 0.011 6.429 015286 AA 0 0 0 AG 0 1 1 GG 24 21 45 0.000 0.012 0.006 016066 AA 0 0 0 AG 0 1 1 GG 24 22 46 0.000 0.011 0.005 016101 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 016341 GG 23 21 44 GT 0 1 1 TT 0 0 0 0.000 0.012 0.006 016403 -- 6 22 28 +- 11 0 11 ++ 6 0 6 0.043 0.000 5.753 016506 CC 0 0 0 CT 1 0 1 TT 22 22 44 0.011 0.000 0.006 016686 CC 23 21 44 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 016938 AA 22 22 44 AG 1 0 1 GG 0 0 0 0.011 0.000 0.006 029695 AA 6 22 28 AG 10 0 10 GG 6 0 6 0.182 0.000 6.828 029832 CC 16 21 37 CT 5 1 6 TT 1 0 1 0.499 0.012 1.348 029940 CC 22 21 43 CT 0 1 1 TT 0 0 0 0.000 0.012 0.006 030025 AA 6 22 28 AG 10 0 10 GG 6 0 6 0.182 0.000 6.828 030144 AA 5 0 5 AG 8 0 8 GG 9 22 31 1.352 0.000 8.568 030157 CC 6 0 6 CT 10 0 10 TT 6 22 28 0.182 0.000 6.828 030227 AA 0 0 0 AG 9 0 9 GG 14 23 37 1.361 0.000 0.541 030551 -- 0 0 0 +- 1 0 1 ++ 20 22 42 0.012 0.000 0.006 031159 AA 6 23 29 AG 10 0 10 GG 6 0 6 0.182 0.000 7.142 031522 CC 11 0 11 CT 12 1 13 TT 0 22 22 2.865 0.011 7.378 031741 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 032099 AA 22 23 45 AT 1 0 1 TT 1 0 1 9.967 0.000 20.206 032113 AA 5 0 5 AT 8 1 9 TT 11 22 33 2.003 0.011 7.759 032115 AA 1 0 1 AT 5 0 5 TT 18 23 41 0.644 0.000 2.448 032125 CC 4 20 24 CT 3 3 6 TT 17 0 17 10.022 0.112 25.660 032127 -- 1 0 1 +- 1 0 1 ++ 22 23 45 9.967 0.000 20.206 032757 CC 10 23 33 CT 8 0 8 TT 5 0 5 1.675 0.000 9.210 032846 -- 19 23 42 +- 4 0 4 ++ 1 0 1 1.361 0.000 3.895 032929 AA 1 0 1 AG 2 0 2 GG 21 23 44 4.959 0.000 10.729 033164 AA 6 0 6 AG 12 0 12 GG 6 23 29 0.000 0.000 5.074 033416 GG 20 23 43 GT 2 0 2 TT 0 0 0 0.050 0.000 0.023 033436 CC 21 23 44 CT 1 0 1 TT 0 0 0 0.012 0.000 0.006 033985 CC 0 0 0 CT 0 1 1 TT 24 22 46 0.000 0.011 0.005 034546 -- 6 0 6 +- 11 2 13 ++ 6 20 26 0.043 0.050 3.528 035015 CC 20 22 42 CT 1 1 2 TT 0 0 0 0.012 0.011 0.024 035190 CC 4 23 27 CT 10 0 10 TT 6 0 6 0.002 0.000 6.514 035191 AA 0 20 20 AG 6 3 9 GG 13 0 13 0.668 0.112 13.133 036248 AA 6 20 26 AG 12 0 12 GG 6 0 6 0.000 0.000 4.297 036267 CC 6 20 26 CT 12 0 12 TT 6 0 6 0.000 0.000 4.297 036411 AA 16 19 35 AG 6 1 7 GG 1 0 1 0.195 0.013 0.741 036454 CC 22 20 42 CT 1 0 1 TT 0 0 0 0.011 0.000 0.006 047070 CC 6 22 28 CT 12 0 12 TT 6 0 6 0.000 0.000 4.815 047645 AA 1 0 1 AG 12 1 13 GG 11 22 33 1.059 0.011 0.046 047769 CC 23 21 44 CT 1 1 2 TT 0 0 0 0.011 0.012 0.023 047780 CC 0 0 0 CG 2 0 2 GG 22 22 44 0.045 0.000 0.023 048219 CC 23 22 45 CG 0 1 1 GG 0 0 0 0.000 0.011 0.006 048536 AA 1 0 1 AC 2 0 2 CC 20 22 42 4.707 0.000 10.228 048748 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 049512 CC 14 0 14 CT 9 3 12 TT 0 19 19 1.361 0.118 9.522 049650 CC 0 0 0 CT 0 1 1 TT 24 22 46 0.000 0.011 0.005 049981 AA 18 23 41 AG 4 0 4 GG 0 0 0 0.220 0.000 0.097 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 003520: t 008873: CAA 016403: t 030551: t 032127: CA 032846: AGGA 034546: caaa