Site      Genotype1 AD-pop    ED-pop    Total-pop Genotype2 AD-pop    ED-pop    Total-pop Genotype3 AD-pop    ED-pop    Total-pop AD-chi2   ED-chi2   Total-chi2
000200    AA        0         0         0         AG        1         0         1         GG        18        23        41        0.014     0.000     0.006     
000931    AA        0         2         2         AC        7         7         14        CC        15        8         23        0.787     0.060     0.005     
001151    CC        22        22        44        CG        1         0         1         GG        0         0         0         0.011     0.000     0.006     
001835    AA        0         0         0         AC        1         0         1         CC        14        18        32        0.018     0.000     0.008     
002190    AA        0         0         0         AG        1         0         1         GG        21        22        43        0.012     0.000     0.006     
002567    AA        0         0         0         AG        1         0         1         GG        22        23        45        0.011     0.000     0.006     
003879    CC        0         2         2         CG        7         8         15        GG        16        13        29        0.741     0.221     0.001     
004012    AA        23        21        44        AG        1         2         3         GG        0         0         0         0.011     0.048     0.051     
004570    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
004608    CC        0         0         0         CG        0         3         3         GG        24        20        44        0.000     0.112     0.051     
004870    --        0         2         2         +-        7         8         15        ++        17        13        30        0.700     0.221     0.005     
005111    AA        0         0         0         AG        0         2         2         GG        24        20        44        0.000     0.050     0.023     
005158    AA        1         2         3         AC        8         7         15        CC        15        13        28        0.003     0.505     0.255     
005327    --        24        22        46        +-        0         1         1         ++        0         0         0         0.000     0.011     0.005     
005753    AA        1         2         3         AC        7         6         13        CC        16        14        30        0.044     1.099     0.872     
005793    AA        1         0         1         AG        1         0         1         GG        22        22        44        9.967     0.000     19.761    
006393    CC        23        21        44        CT        1         0         1         TT        0         0         0         0.011     0.000     0.006     
006533    CC        23        23        46        CT        1         0         1         TT        0         0         0         0.011     0.000     0.005     
006640    AA        0         0         0         AG        1         0         1         GG        23        23        46        0.011     0.000     0.005     
006716    CC        24        22        46        CT        0         1         1         TT        0         0         0         0.000     0.011     0.005     
006832    AA        22        21        43        AG        2         2         4         GG        0         0         0         0.045     0.048     0.093     
008331    --        1         2         3         +-        8         8         16        ++        14        13        27        0.011     0.221     0.090     
008536    AA        15        12        27        AG        8         7         15        GG        1         2         3         0.003     0.399     0.210     
008677    --        0         0         0         +-        1         0         1         ++        23        21        44        0.011     0.000     0.006     
008708    AA        0         2         2         AC        6         7         13        CC        17        12        29        0.517     0.399     0.120     
008988    AA        24        19        43        AG        0         2         2         GG        0         0         0         0.000     0.053     0.023     
010411    CC        0         0         0         CT        9         0         9         TT        14        22        36        1.361     0.000     0.556     
010493    AA        0         0         0         AG        3         0         3         GG        20        22        42        0.112     0.000     0.054     
010537    AA        0         0         0         AG        1         0         1         GG        22        22        44        0.011     0.000     0.006     
010774    CC        22        22        44        CG        1         0         1         GG        0         0         0         0.011     0.000     0.006     
010895    CC        17        13        30        CG        7         8         15        GG        0         2         2         0.700     0.221     0.005     
011090    AA        0         2         2         AC        7         8         15        CC        17        13        30        0.700     0.221     0.005     

Note:

AD: African_Descent
ED: European_Descent
Total: All_population
pop : population

Diallelic insertion/deletion polymorphisms are represented as:

+ : insertion allele
- : deletion allele

The + (inserted) allele for each site is listed below:

004870: agaggagga
005327: t
008331: c
008677: ccatgctgtga