ACHE Color FASTA

The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.

*Display courtesy of GeneSNPs

TGGCGCTTCC TTCCAAGGTG GGAGACAGAG ATAAAAGAGG GGTAGGGAAA 50 TTCTCTGAAT TGGCAGAACT GGTAGTAGAA GCAAGGCTCA TTCCTGGATA 100 AACAGAAATG GTGAGAGAAG AAATGGGAAA AATCAAGGAC ATCCCTGCAG 150 TGACAGCTGT GGAGGGTGGG GAGTTTACTA TGCTAGACTA TGTAGGGAAA 200 CGCCTCCTGG CTTGACAGGT TAGGTGCCTG TGTTGACAAC GGTTGCTGAG 250 | var(218):[A:0.01] AGCTCAAGGT GAAAAGAGGG ATAGTTCCAG GAAATGATAA CCCTGGTGAT 300 AAACTATCCC TGCCCTCCCT ATCTTCATTG TACAGGCCTA GAAACTCGTG 350 ACGACAGAGG TTAGGTGACA CCTGCGTGGC ACAGTTCGTC TGGAGGGTGA 400 | var(375):[T:0.11] CAGGGGCAAG CCTTCATCAC TAGCAGGGCC AAAAATCCCT AAAGCCTCAG 450 | NOT SCANNED GACTGGGGCA GGCCTCAGAG CACTCGTTCA CAGTTTGTTT CCATCATTTT 500 | REPEAT ATTTTTTTGC GGAGAAGGGA GTCTCGCTAT GTTGCCCAGG CTAGTCTCCA 550 ACTCCTGGAC TGAAGCGATC CTCCTGTCTC GGCCTCCCAG AGTGCTGGGA 600 TTACAGGCAC CGCACTAGGG GCCACACGCG GCCCCATCAT TTTAATAATT 650 CATAATTACC ACGCTTAGAA ACCTGCCTCA GATTCATTCC CCCCGCAGCA 700 ACACCCACCA TCCACCCTCC TGTCCCCTCC CCCATGCACA GCCCTTACAT 750 CTGCTCTTCA GGGATCTCAA CTAGGGCACA TGGTCTGGCC AGTGAGGAGC 800 CTTCAACTAG TGCGGCCAGA ACGCTGAAGG CCGGATACAA GGAGCCTCGG 850 TGTCCAGGCA GGGGATTTGG GGTTGCCTGA GATTGGGGCG GGGAAAGCCG 900 GAGACAGTGG GCACAGATGG CGAGGGGTTC ACCTCCCCAA CACCCCCAAC 950 | var(945):[A:0.16] | var(946):[A:0.15] CCAGCCCAGT CTCCGAGGCC CGAGTGGCTG CTTTTTGCGC CACCTGGCGG 1000 | var(956):[A:0.16] | var(980):[:0.16] CCGTCTCCAG CGAGCGGAGC GCGGGTGACC GTGCCTGCGG GACCCGGTTC 1050 CCGTGGGGCG AGCGGGCGTG GGGCCCGCCC AGCTTGGAGA GCCGGGAACC 1100 GCGCGGCCCA GGGACTGGCA AGACTCCGGA TTCAACCCCT GCGAGGCCCC 1150 | var(1123):[G:0.01] GCAACCCGGT GCCCGCGGTC CCTGGCGGCG GCGCCCGCGT GCCCGAGGCG 1200 | var(1193):[G:0.11] CTGCGGGGCG CTGCGGGGCG CGCGGCGGTT AGAGCGAGCG TGTGCGCACG 1250 | var(1228):[C:0.01] CGCCCACCCC ACGCCGCGCC CCGCACCGCC GCGCGCGCGC ACGCACGCCC 1300 GACGCTGGCC TGCGCCGGCC GCTCTCCCAC GCGGGGTCTC GGGGGCTCCT 1350 GAGCCGGCCG CCTCCAGGAA GCAGGCGCCG CGCGGTATTG CCGCATGCAC 1400 CTCGGTCGTG GGGACCCCGC TGCAGCAGCC CTGTCCACAC GGGTGAACTC 1450 CTGGAGGGCG GGGCGGGGGG CAATCTGCGC GGGTCAGGCC CCTCGGAGCA 1500 GGCTGGGGGC GCCCGAGCCA GGCCGCTCCC ACCTGCCAGC CGCGTGGCCA 1550 ATGAATGCTA GGCCTGGTGA TGTCATGCCC CGACCGGACC CTGGTGACGA 1600 AAGTCCGAAG TCACCCGTCA GGGAACCAGC ACAGACCCAC CCGCGGGGGT 1650 TCCAGAAGTT TCCACTGCCG CCGCGGAGTG CGGCCTCGCC CAGCAGCCTT 1700 GCGCGTGCTA CCACGCTGTC CTGCCTTCTC AGGTGTCCCA AGTCACCCCT 1750 | var(1704):[T:0.01] | var(1745):[:0.01] TCCTCCCCCA GGGGTCTCCT GTCTCCATGC CCTCCCACCT CATTTCCACT 1800 AGCGATCCCA TTTTACATCT CCATTCCCAC AGGTGTCCTT TCATCCCCAG 1850 GAGTGTCCCA CGTCACCTTT TCTGCACCCG TGCCACCTGG ACCCCTAAGG 1900 GGACGGTCCT CTGCCACACT CCCACATGCC TCTCCTCCCA TGCCACCCGT 1950 | var(1908):[A:0.44] CTGTGTCGTG GCCGGGGATG CATGACCCCT TGGCCTTGCG CTAACTTCAC 2000 CAGCCTCGAG CGAGACCGAC AGGGTGTCCA AGTGTGTCCG TCCGTCTGTG 2050 AAAGTCGTCC CTGCGTTTGT CTGTGCCTGT CACTGCATGA GGTCGTCCGT 2100 CTGCGCGTGT CTGTCTCCAC GGGCTTCTGT CCGTCTGTCT GTCACGTGGG 2150 TGTCTACTCC GCCGCTGCAG GTCTTTGGGT CGCGTCTGTC ACTGCGCTCT 2200 | var(2195):[T:0.15] GTCGTCGGTC GGCGTCTGGC ACTGGAGTGC GTCTGGGCCC CGGGGTCTCC 2250 GGGTCTCGGC TCCAAGGGAG GGAGAGAGAG GGGAGGTGGC CACCCGGGAG 2300 AGCGGGGAGG GGCGGGGGCG GAGACAGTGG GCGGGGGCGG GCGGGGGCGC 2350 TGTGAGGCCC GGAGGGGGTG TGTGCGGGGG GCCGGAGGCG GCGGCTGTCA 2400 | var(2365):[T:0.01] GAGTCGGCTC AGCCTGCGCC GGGGAACATC GGCCGCCTCC AGCTCCCGGC 2450 | Exon 1 | UTR GCGGCCCGGC CCGGCCCGGC TCGGCCGCCT CAGGTGAGTC TCCCTCCCCG 2500 | var(2499):[T:0.02] CCCGGGACTC TCCTTAAGGC CCGGGTCCGG GGCACCGTGC GCTCCCCGAG 2550 | var(2531):[A:0.02] | var(2547):[T:0.15] GGGTCCAGGC CCCCCTAACG GGACGGCTCC CGCTTCCCCG GGCCTGCCCC 2600 GCGCCGCCCT CCGCTGCCCC GCACTCGTCC GGAACTCTTC CCCGGCCGCC 2650 TCACACTCAC CGACGCCCAC GCAGGAGCCC GAGCCCGCGG GAACGGCCGC 2700 CGCCTCTGCG CTCCGATTCC CGCGGGGACC CCCGAGCACC CCTTCCCCGA 2750 TCGCTCCCTA GTCCGGGGCC ACTGGAAGAC ACCCCCTAAT TGGGGCGGTA 2800 CCCGAGCTGC GCAGGTTCCC GGCGCCGGGC TGGGCACCCC CATCCCCAGG 2850 GCCACAAGCC CAGCGCCCCT GCGCAGCGCC CCGCAGAGGC CCCCTCCGAG 2900 GCCCAGGACG CCCCCTCCCG CGGAGACTCC ATCTCTATTT TTTGGGAAGG 2950 GGAGGCTCGG CGGAAGCCCC GAGTTATAAT TAGCGCCACT CGGGTTTCCT 3000 AGTTAATCTC CAGCAGCACC ACCACCCCCC GCTCAGGGCG GCGGGGGCTG 3050 | var(3011):[T:0.01] | var(3028):[A:0.01] GGCTAGGAGT GACCGGCGGG AGAGGGGGGA GTTCCCACCC GGGGAATTTT 3100 | var(3074):[C:0.01] GATCCTTTGG CTGGAGATGC CGGAACCGTA GCAGCTGCTG CCCCCAAAAT 3150 AGCGCCCCCG CCCCTGCAGC CGGGGATCTC CGGAGTCCCG GGAACGCAGG 3200 CGTCCCGGCT CGCCCTTCAG GCGGCTCTGC AAGGCCCTCG AGCCCCCAGG 3250 CCCCCTCCCC AAGTTCCCGG CTCCTGGCTC GGGGCGGGGA GCGCCGACCT 3300 TTTCTCGGTC TCTACTGCCC TCCGCCGGCG GCGGCGTGCA CGGCAGCTTC 3350 | var(3339):[T:0.36] AGACGGATGG GGGGCTCTCG AGTCCTGGGG GACGCGGGCT GGCGAGCCTG 3400 TTTGCTTGGG GCTGGGCTGG GAGCGTGCGC AGCTGATGGG AACCCGCGGG 3450 | var(3407):[:0.98] | var(3415):[C:0.02] CATCAGCGCT CGGTGCCAGA CATTGGATGA GAAGGGGCAG GGTTGGGTGG 3500 | var(3496):[A:0.02] GGAGTGGACT AGGCAGGATT TGGGGGACCC CGGGACCTGA GGCTTCCACA 3550 CCCTGAATGC CCAGCCCACC GCCCCCCAGG GCCCCGGGTC TGGCCGACCC 3600 | var(3551):[A:0.10] | var(3586):[A:0.26] AGGAGAGCGG GGCTGCGCCT TCAGGCCGCC GCAAGCTCCC CCAGCGGCGC 3650 | var(3610):[A:0.27] TGCCCGTCCG TGAGGCCGCG CCCCTGTCGG GTGGCCTGTT CGTGGACTGA 3700 GGCTTCTGGT GCCCTCACTG CACGAGCTGG GCCCGGCCCA GTTCCGGGAA 3750 | var(3742):[G:0.01] GAGGTGAGGG CAGTGGACCC CTGCGGAGCA GAGAGGGTGC TCCTCTCTGT 3800 TCCCTGCATT TGTCTGGATA TGGGTGTCTG CCTGATCTCT TTCCCCTCCT 3850 GCCCGCTGGC CTGTGTCCTT GTCTCTGCCT GTCTCCTTCC CTCCCTCCCT 3900 CTCTCCCCTC ATCTTTGCCA ACCTGCCCCA CCTCCTCTGC AGCTGAGCGA 3950 TAACCCTTGG GCCGACAGTG CCCTAATCTC CTCCCTCCTG GCTTCTCGAC 4000 CGACCCTTCA CCCTTTCCCT TTCTTTCTCC CAGCAGACGC CGCCTGCCCT 4050 | Exon 2 | UTR GCAGCCATGA GGCCCCCGCA GTGTCTGCTG CACACGCCTT CCCTGGCTTC 4100 M R P P Q C L L H T P S L A S 15 CCCACTCCTT CTCCTCCTCC TCTGGCTCCT GGGTGGAGGA GTGGGGGCTG 4150 P L L L L L L W L L G G G V G A 31 AGGGCCGGGA GGATGCAGAG CTGCTGGTGA CGGTGCGTGG GGGCCGGCTG 4200 | var(4157):[A:0.02] E G R E D A E L L V T V R G G R L 48 CGGGGCATTC GCCTGAAGAC CCCCGGGGGC CCTGTCTCTG CTTTCCTGGG 4250 R G I R L K T P G G P V S A F L G 65 CATCCCCTTT GCGGAGCCAC CCATGGGACC CCGTCGCTTT CTGCCACCGG 4300 I P F A E P P M G P R R F L P P 81 AGCCCAAGCA GCCTTGGTCA GGGGTGGTAG ACGCTACAAC CTTCCAGAGT 4350 E P K Q P W S G V V D A T T F Q S 98 GTCTGCTACC AATATGTGGA CACCCTATAC CCAGGTTTTG AGGGCACCGA 4400 V C Y Q Y V D T L Y P G F E G T E 115 GATGTGGAAC CCCAACCGTG AGCTGAGCGA GGACTGCCTG TACCTCAACG 4450 M W N P N R E L S E D C L Y L N 131 TGTGGACACC ATACCCCCGG CCTACATCCC CCACCCCTGT CCTCGTCTGG 4500 | var(4459):[G:0.01] V W T P Y P R P T S P T P V L V W 148 ATCTATGGGG GTGGCTTCTA CAGTGGGGCC TCCTCCTTGG ACGTGTACGA 4550 I Y G G G F Y S G A S S L D V Y D 165 TGGCCGCTTC TTGGTACAGG CCGAGAGGAC TGTGCTGGTG TCCATGAACT 4600 G R F L V Q A E R T V L V S M N 181 ACCGGGTGGG AGCCTTTGGC TTCCTGGCCC TGCCGGGGAG CCGAGAGGCC 4650 Y R V G A F G F L A L P G S R E A 198 CCGGGCAATG TGGGTCTCCT GGATCAGAGG CTGGCCCTGC AGTGGGTGCA 4700 P G N V G L L D Q R L A L Q W V Q 215 GGAGAACGTG GCAGCCTTCG GGGGTGACCC GACATCAGTG ACGCTGTTTG 4750 E N V A A F G G D P T S V T L F 231 GGGAGAGCGC GGGAGCCGCC TCGGTGGGCA TGCACCTGCT GTCCCCGCCC 4800 G E S A G A A S V G M H L L S P P 248 AGCCGGGGCC TGTTCCACAG GGCCGTGCTG CAGAGCGGTG CCCCCAATGG 4850 S R G L F H R A V L Q S G A P N G 265 ACCCTGGGCC ACGGTGGGCA TGGGAGAGGC CCGTCGCAGG GCCACGCAGC 4900 | var(4863):[A:0.01] P W A T V G M G E A R R R A T Q 281 TGGCCCACCT TGTGGGCTGT CCTCCAGGCG GCACTGGTGG GAATGACACA 4950 | var(4929):[T:0.01] L A H L V G C P P G G T G G N D T 298 GAGCTGGTAG CCTGCCTTCG GACACGACCA GCGCAGGTCC TGGTGAACCA 5000 E L V A C L R T R P A Q V L V N H 315 CGAATGGCAC GTGCTGCCTC AAGAAAGCGT CTTCCGGTTC TCCTTCGTGC 5050 E W H V L P Q E S V F R F S F V 331 CTGTGGTAGA TGGAGACTTC CTCAGTGACA CCCCAGAGGC CCTCATCAAC 5100 | var(5088):[A:0.01] P V V D G D F L S D T P E A L I N 348 GCGGGAGACT TCCACGGCCT GCAGGTAACT AGTGGCTAGC TGGCGTGAAG 5150 | var(5113):[A:0.03] | var(5145):[A:0.01] A G D F H G L Q 356 CTGGCTCCTC TGGGTCCCAA CGGTCCCTCC CCTCCCTGCA GGGACCCAGG 5200 CATGAGGGCT TCTCCAGGCC CATTCCCAGA AGTCCCAGAA GTCCTCCCTG 5250 AGGGCTCAGA TCCCAGGGTG GTCAGCAGGG CAGACAGGAA AGCCACCATG 5300 GGTCTATTTT CTCTTTCTCT GCATCCCTCC CCTGATCTCG TCCTCTCTCT 5350 GTCCATGGTT CCGGGTCTGT AACTGTTCAT CTCTCTGGCT CTTTGTCTGT 5400 | var(5395):[C:0.01] CCATCTGTTT CTGTCTACTT GTCTGTCTGT GCCTGTCGCT CCATCCCACC 5450 CCCCTCTCCC TCACCCCCAG GTGCTGGTGG GTGTGGTGAA GGATGAGGGC 5500 | Exon 3 V L V G V V K D E G 366 TCGTATTTTC TGGTTTACGG GGCCCCAGGC TTCAGCAAAG ACAACGAGTC 5550 S Y F L V Y G A P G F S K D N E S 383 TCTCATCAGC CGGGCCGAGT TCCTGGCCGG GGTGCGGGTC GGGGTTCCCC 5600 L I S R A E F L A G V R V G V P 399 AGGTAAGTGA CCTGGCAGCC GAGGCTGTGG TCCTGCATTA CACAGACTGG 5650 Q V S D L A A E A V V L H Y T D W 416 CTGCATCCCG AGGACCCGGC ACGCCTGAGG GAGGCCCTGA GCGATGTGGT 5700 L H P E D P A R L R E A L S D V V 433 GGGCGACCAC AATGTCGTGT GCCCCGTGGC CCAGCTGGCT GGGCGACTGG 5750 G D H N V V C P V A Q L A G R L 449 CTGCCCAGGG TGCCCGGGTC TACGCCTACG TCTTTGAACA CCGTGCTTCC 5800 A A Q G A R V Y A Y V F E H R A S 466 ACGCTCTCCT GGCCCCTGTG GATGGGGGTG CCCCACGGCT ACGAGATCGA 5850 | var(5833):[T:0.15] T L S W P L W M G V P H G Y E I E 483 GTTCATCTTT GGGATCCCCC TGGACCCCTC TCGAAACTAC ACGGCAGAGG 5900 F I F G I P L D P S R N Y T A E 499 AGAAAATCTT CGCCCAGCGA CTGATGCGAT ACTGGGCCAA CTTTGCCCGC 5950 E K I F A Q R L M R Y W A N F A R 516 ACAGGGTCAG CAGTGCAGAG GGAGAGAAGG CTGGGGAGGA CAGGAGTCGG 6000 T G 518 GGGCGGGAGG ACACACAAAG GCAGACACAC GGAGACAGAA AGGACGGGTG 6050 GGACAGGGGC AGGATAGAAC AGCCAGAGAG GGATATGCTC ACAAAGTAGA 6100 | var(6055):[:0.01] TAAAAGGGGA GAGAAAAAGA AAGGAGACAG AGAAGGCAGA GGGGGTCTTG 6150 CAGAGACAGA GGCAAAGGAA AGTGAGGAGG AGACGAGGTA GACATGGAGG 6200 GGGCGGGGCA CAGTGGCTCA CCCCTGTAAT TCCAGCCCTT TGGGAGGCCA 6250 | REPEAT | var(6214):[C:0.01] AGGTGGGAGG ATCCCCTGAG GCCAGGAGTT TGAGACCAGA CTGGACAACA 6300 | var(6271):[A:0.39] TAACAAGACC CCGACTCTTA AAAAGAAAAA AAATACAAAA CTTAGCCAGG 6350 CACGGTGGCT CGTGCCTCTA GTCCCAGCTA CTTGGGAAGG TGAGGCAGGA 6400 GGATTGCTTG AGCCTGGGAG GTTGAGGCTG CAGTGAGCTA TGATGGCACC 6450 ACTGCACTCC AGCCTGAGTG GCCCTATCTC TGGAAAAAAA AAAAAAAAAA 6500 AAAAAGGGAG ACCAAGACAA AGGAGTTGGA GCTGGATTAA GTCAAACCAG 6550 TGATGATTCA CTAGCAGTGA CACATTCTCT CACACACACA CCAGTTTACC 6600 | var(6591):[T:0.02] TGGATCGAGA AGAGGACAAT GAAATCTAGC ATTGGATGGG TGTTGTTAAA 6650 AAATGTGATG TTTGTAGACA TAGGACCCGT CCTGGTTATT TAGGAAAGTC 6700 | var(6672):[G:0.02] TCAAGACATC CTAGCCATTT TTTTAGTGAG AGAAACAAAG ATGGAACAGA 6750 AAAGCTGAGG GAAACGGAAG GAGACGGAGC GCTTGAGGAA GGGAAGACCC 6800 | var(6793):[A:0.07] CAATGACCGC GCACATTGGA GAAAGTGGTG GGAGGGAGGG GACGGGTTCT 6850 CTGGGGCTCT CCGCTGAGCT GAAGAGTCCG GGATCCCGTG GAGTTGGGGG 6900 CCACCTCCTC CCACTGCCCG TCTGGACTGA GCCTTCCCTT CCTTCCGCAG 6950 518 GGATCCCAAT GAGCCCCGAG ACCCCAAGGC CCCACAATGG CCCCCGTACA 7000 | Exon 4 D P N E P R D P K A P Q W P P Y 534 CGGCGGGGGC TCAGCAGTAC GTTAGTCTGG ACCTGCGGCC GCTGGAGGTG 7050 T A G A Q Q Y V S L D L R P L E V 551 CGGCGGGGGC TGCGCGCCCA GGCCTGCGCC TTCTGGAACC GCTTCCTCCC 7100 R R G L R A Q A C A F W N R F L P 568 CAAATTGCTC AGCGCCACCG GTATGCAGGG GCCAGCGGGC AGCGGCTGGG 7150 K L L S A T 574 AGGAGGGGAG TGGGAGCCCG CCAGGTGTAA CCCCTCTCTT CTCCCCCTAG 7200 574 CCTCGGAGGC TCCCAGCACC TGCCCAGGCT TCACCCATGG GGAGGCTGCT 7250 | Exon 5 A S E A P S T C P G F T H G E A A 591 CCGAGGCCCG GCCTCCCCCT GCCCCTCCTC CTCCTCCACC AGCTTCTCCT 7300 | var(7252):[G:0.27] | var(7272):[A:0.01] P R P G L P L P L L L L H Q L L L 608 CCTCTTCCTC TCCCACCTCC GGCGGCTGTG AACACGGCCT CTTCCCCTAC 7350 | UTR L F L S H L R R L 617 GGCCACAGGG GCCCCTCCTC TAATGAGTGG TCGGACCGTG GGGAAGGGCC 7400 CCACTC