Site Genotype1 AD-pop ED-pop Total-pop Genotype2 AD-pop ED-pop Total-pop Genotype3 AD-pop ED-pop Total-pop AD-chi2 ED-chi2 Total-chi2 000176 AA 2 0 2 AG 2 0 2 GG 19 22 41 8.746 0.000 18.597 000451 CC 19 23 42 CT 2 0 2 TT 0 0 0 0.053 0.000 0.024 000527 AA 2 0 2 AG 2 0 2 GG 17 23 40 7.843 0.000 18.151 000640 AA 19 22 41 AG 2 0 2 GG 0 0 0 0.053 0.000 0.024 000951 AA 23 21 44 AG 1 0 1 GG 0 1 1 0.011 22.000 19.761 001480 CC 22 23 45 CG 1 0 1 GG 0 0 0 0.011 0.000 0.006 001501 AA 2 0 2 AG 1 0 1 GG 20 23 43 13.836 0.000 28.600 001631 CC 0 0 0 CT 4 0 4 TT 17 22 39 0.233 0.000 0.102 001846 AA 2 8 10 AG 2 7 9 GG 12 6 18 5.565 2.249 8.871 001848 CC 1 2 3 CT 3 4 7 TT 12 15 27 1.335 3.070 4.450 002173 CC 4 9 13 CT 6 3 9 TT 12 5 17 3.035 6.670 11.103 002179 AA 2 0 2 AG 1 0 1 GG 19 20 39 13.192 0.000 26.036 002343 CC 3 0 3 CT 5 0 5 TT 16 23 39 4.041 0.000 11.065 002608 AA 2 0 2 AG 3 0 3 GG 19 23 42 5.958 0.000 13.551 003113 AA 2 4 6 AG 4 6 10 GG 18 11 29 3.840 2.679 7.142 003179 AA 0 0 0 AT 2 0 2 TT 22 21 43 0.045 0.000 0.023 004021 AA 0 0 0 AT 1 0 1 TT 21 23 44 0.012 0.000 0.006 004456 CC 19 10 29 CT 2 5 7 TT 0 3 3 0.053 2.148 4.883 004967 AA 3 0 3 AG 1 0 1 GG 20 23 43 16.643 0.000 33.611 005052 AA 0 0 0 AG 2 0 2 GG 20 20 40 0.050 0.000 0.025 005245 -- 0 3 3 +- 2 6 8 ++ 20 13 33 0.050 2.148 4.519 005765 CC 2 4 6 CT 4 6 10 TT 17 13 30 3.584 3.390 7.456 007459 -- 16 10 26 +- 4 4 8 ++ 3 3 6 5.497 3.192 8.711 007954 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 008803 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 009018 AA 0 0 0 AG 1 0 1 GG 21 17 38 0.012 0.000 0.007 009412 AA 20 22 42 AG 4 0 4 GG 0 0 0 0.198 0.000 0.095 009570 AA 7 4 11 AG 5 3 8 GG 9 15 24 5.666 8.909 14.992 010966 AA 24 13 37 AG 0 6 6 GG 0 4 4 0.000 3.390 11.583 011419 AA 1 4 5 AC 3 5 8 CC 15 11 26 1.815 3.701 6.953 011532 AA 16 12 28 AG 2 5 7 GG 1 4 5 3.698 4.121 9.106 013203 AA 3 0 3 AG 1 0 1 GG 19 22 41 15.902 0.000 32.138 013345 AA 0 0 0 AG 2 0 2 GG 21 22 43 0.048 0.000 0.023 013481 GG 22 22 44 GT 1 0 1 TT 0 0 0 0.011 0.000 0.006 014066 AA 1 0 1 AG 2 0 2 GG 21 23 44 4.959 0.000 10.729 014317 CC 16 23 39 CT 2 0 2 TT 2 0 2 7.389 0.000 17.705 015053 CC 2 4 6 CT 3 6 9 TT 18 13 31 5.624 3.390 9.096 015730 GG 24 20 44 GT 0 1 1 TT 0 0 0 0.000 0.012 0.006 016854 CC 11 15 26 CG 5 4 9 GG 7 4 11 6.999 6.933 14.536 018199 AA 2 3 5 AG 2 6 8 GG 16 11 27 7.389 1.633 7.277 018223 CC 17 20 37 CT 2 0 2 TT 1 0 1 3.951 0.000 8.975 018575 CC 0 2 2 CT 0 3 3 TT 21 14 35 0.000 4.281 11.250 018644 AA 20 12 32 AC 2 6 8 CC 2 4 6 9.197 3.035 10.995 018862 CC 0 0 0 CT 2 0 2 TT 22 23 45 0.045 0.000 0.022 018931 AA 19 20 39 AG 1 0 1 GG 3 0 3 15.902 0.000 30.666 019174 AA 2 4 6 AT 2 6 8 TT 19 13 32 8.746 3.390 10.995 019227 AA 19 13 32 AG 2 6 8 GG 2 4 6 8.746 3.390 10.995 019703 GG 21 13 34 GT 2 6 8 TT 1 4 5 4.959 3.390 9.530 020023 -- 1 4 5 +- 2 6 8 ++ 11 13 24 2.431 3.390 6.302 020209 AA 0 0 0 AC 2 0 2 CC 13 23 36 0.077 0.000 0.028 020341 AA 0 0 0 AG 1 0 1 GG 17 23 40 0.015 0.000 0.006 020699 AA 0 1 1 AG 0 0 0 GG 22 22 44 0.000 23.000 45.000 020988 GG 21 23 44 GT 2 0 2 TT 1 0 1 4.959 0.000 10.729 021898 CC 20 12 32 CT 2 5 7 TT 1 5 6 4.707 5.374 12.783 022087 AA 21 13 34 AG 2 5 7 GG 1 5 6 4.959 5.874 13.616 022163 AA 0 0 0 AG 1 0 1 GG 22 23 45 0.011 0.000 0.006 022354 CC 0 2 2 CT 0 0 0 TT 23 21 44 0.000 23.000 46.000 022413 AA 1 0 1 AG 2 0 2 GG 20 23 43 4.707 0.000 10.478 022879 AA 11 13 24 AT 4 6 10 TT 2 4 6 2.037 3.390 5.566 023320 AA 18 19 37 AG 2 0 2 GG 0 0 0 0.055 0.000 0.027 023775 -- 1 4 5 +- 2 4 6 ++ 17 11 28 3.951 4.997 10.882 024013 AA 3 0 3 AG 1 0 1 GG 17 21 38 14.417 0.000 29.929 024231 AA 20 23 43 AC 1 0 1 CC 3 0 3 16.643 0.000 33.611 024460 CC 2 0 2 CG 2 0 2 GG 20 23 43 9.197 0.000 19.489 024888 AA 21 21 42 AC 3 0 3 CC 0 0 0 0.107 0.000 0.054 025506 AA 0 0 0 AT 3 0 3 TT 21 23 44 0.107 0.000 0.051 027742 CC 0 1 1 CT 0 0 0 TT 23 21 44 0.000 22.000 45.000 028203 AA 1 0 1 AT 1 0 1 TT 22 23 45 9.967 0.000 20.206 028207 AA 1 0 1 AG 2 0 2 GG 21 23 44 4.959 0.000 10.729 028265 AA 0 1 1 AG 0 0 0 GG 23 22 45 0.000 23.000 46.000 029017 AA 1 0 1 AG 0 0 0 GG 23 23 46 24.000 0.000 47.000 029120 CC 8 17 25 CG 8 3 11 GG 7 3 10 2.112 7.887 9.939 029735 CC 21 23 44 CT 2 0 2 TT 1 0 1 4.959 0.000 10.729 029807 AA 21 20 41 AG 2 0 2 GG 1 0 1 4.959 0.000 9.977 029949 AA 0 0 0 AG 2 0 2 GG 19 21 40 0.053 0.000 0.025 030202 CC 0 0 0 CG 5 0 5 GG 19 23 42 0.324 0.000 0.148 030225 CC 23 23 46 CT 1 0 1 TT 0 0 0 0.011 0.000 0.005 030306 GG 0 0 0 GT 4 0 4 TT 20 23 43 0.198 0.000 0.093 030899 AA 18 23 41 AG 4 0 4 GG 1 0 1 1.252 0.000 3.784 030921 -- 22 23 45 +- 2 0 2 ++ 0 0 0 0.045 0.000 0.022 031618 GG 22 23 45 GT 2 0 2 TT 0 0 0 0.045 0.000 0.022 031657 CC 9 17 26 CG 8 3 11 GG 7 3 10 2.593 7.887 10.407 031949 AA 19 23 42 AG 2 0 2 GG 2 0 2 8.746 0.000 19.043 032424 CC 1 0 1 CG 3 0 3 GG 18 21 39 2.296 0.000 5.665 032604 AA 1 0 1 AC 1 0 1 CC 22 23 45 9.967 0.000 20.206 032964 AA 7 17 24 AG 8 3 11 GG 7 3 10 1.636 7.887 9.469 033480 CC 16 17 33 CT 4 3 7 TT 3 3 6 5.497 7.887 13.200 035227 CC 1 0 1 CT 0 0 0 TT 19 22 41 20.000 0.000 42.000 035508 CC 1 0 1 CT 2 0 2 TT 17 21 38 3.951 0.000 9.226 035640 AA 1 0 1 AG 1 0 1 GG 22 23 45 9.967 0.000 20.206 035739 AA 0 0 0 AG 1 0 1 GG 23 23 46 0.011 0.000 0.005 035824 AA 20 23 43 AG 2 0 2 GG 2 0 2 9.197 0.000 19.489 035881 AA 23 23 46 AG 1 0 1 GG 0 0 0 0.011 0.000 0.005 036024 CC 5 4 9 CG 4 4 8 GG 15 15 30 8.543 6.933 15.521 036139 CC 20 23 43 CT 2 0 2 TT 2 0 2 9.197 0.000 19.489 036444 AA 0 0 0 AG 2 0 2 GG 21 22 43 0.048 0.000 0.023 036962 CC 0 3 3 CT 0 3 3 TT 24 17 41 0.000 7.887 18.736 037071 CC 21 23 44 CT 2 0 2 TT 1 0 1 4.959 0.000 10.729 037138 AA 3 11 14 AG 5 3 8 GG 16 9 25 4.041 12.498 19.242 037142 AA 16 23 39 AG 6 0 6 GG 2 0 2 1.407 0.000 5.074 037165 AA 16 23 39 AG 6 0 6 GG 2 0 2 1.407 0.000 5.074 037181 AA 16 23 39 AG 6 0 6 GG 2 0 2 1.407 0.000 5.074 037319 AA 1 2 3 AG 2 3 5 GG 17 16 33 3.951 4.954 9.252 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 005245: A 007459: t 020023: TAAT 023775: TTATC 030921: T