Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000279 00000 ------------ A 0.96 0.77 0.87 G 0.04 0.23 0.13 0000 --- --- --- --- 000324 00000 ------------ - 1.00 0.77 0.89 + 0.00 0.23 0.11 0000 --- --- --- --- 000413 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 000467 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001005 00000 ------------ - 0.81 0.65 0.73 + 0.19 0.35 0.27 0000 --- --- --- --- 001035 00000 ------------ A 1.00 0.76 0.87 G 0.00 0.24 0.13 0000 --- --- --- --- 001039 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 001324 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001374 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002339 00000 ------------ A 0.79 0.63 0.72 G 0.21 0.37 0.28 0000 --- --- --- --- 002459 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 002801 00000 ------------ G 0.90 0.78 0.84 A 0.10 0.22 0.16 0000 --- --- --- --- 002865 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016973 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017040 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017123 00000 ------------ A 0.35 0.80 0.57 G 0.65 0.20 0.43 0000 --- --- --- --- 017144 00000 ------------ T 0.71 0.48 0.60 G 0.29 0.52 0.40 0000 --- --- --- --- 017740 00000 ------------ T 0.74 0.70 0.72 C 0.26 0.30 0.28 0000 --- --- --- --- 017874 00000 ------------ G 0.63 0.57 0.60 T 0.37 0.43 0.40 0000 --- --- --- --- 018362 00000 ------------ C 0.54 1.00 0.76 T 0.46 0.00 0.24 0000 --- --- --- --- 018483 00000 ------------ - 0.44 0.32 0.38 + 0.56 0.68 0.62 0000 --- --- --- --- 018619 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018815 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019212 00000 ------------ C 0.56 0.70 0.63 A 0.44 0.30 0.37 0000 --- --- --- --- 019355 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 019440 00000 ------------ A 0.42 0.70 0.55 C 0.58 0.30 0.45 0000 --- --- --- --- 019536 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019650 00000 ------------ T 0.59 0.70 0.64 C 0.41 0.30 0.36 0000 --- --- --- --- 019815 00000 ------------ G 0.65 0.41 0.53 T 0.35 0.59 0.47 0000 --- --- --- --- 019965 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 020345 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020460 00000 ------------ G 0.67 0.67 0.67 A 0.33 0.33 0.33 0000 --- --- --- --- 020611 00527 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0012 GTG ATG VAL(V) MET(M) 020816 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020927 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020948 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 020974 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 021808 00000 ------------ C 0.54 1.00 0.77 T 0.46 0.00 0.23 0000 --- --- --- --- 021906 00000 ------------ G 1.00 0.74 0.87 A 0.00 0.26 0.13 0000 --- --- --- --- 022391 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 022439 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 022601 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022638 00000 ------------ T 1.00 0.74 0.88 C 0.00 0.26 0.12 0000 --- --- --- --- 027058 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 027213 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 027393 00000 ------------ A 0.65 1.00 0.83 G 0.35 0.00 0.17 0000 --- --- --- --- 027420 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027646 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027717 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028005 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028007 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 028584 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028761 00862 SYNON C 0.83 1.00 0.91 T 0.17 0.00 0.09 0123 TAC TAT TYR(Y) TYR(Y) 029402 00914 NON-SYN C 1.00 0.89 0.95 A 0.00 0.11 0.05 0141 CAG AAG GLN(Q) LYS(K) 030021 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030152 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 030727 00000 ------------ T 0.58 0.67 0.63 C 0.42 0.33 0.37 0000 --- --- --- --- 030983 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 038091 00000 ------------ C 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 038230 00000 ------------ - 1.00 0.70 0.85 + 0.00 0.30 0.15 0000 --- --- --- --- 038243 00000 ------------ C 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 038265 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 038767 00000 ------------ A 0.62 1.00 0.81 G 0.38 0.00 0.19 0000 --- --- --- --- 039521 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042098 00000 ------------ A 0.98 0.74 0.86 G 0.02 0.26 0.14 0000 --- --- --- --- 042105 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 042484 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 042645 00000 ------------ T 1.00 0.90 0.95 C 0.00 0.10 0.05 0000 --- --- --- --- 045291 00000 ------------ T 0.93 0.45 0.70 A 0.07 0.55 0.30 0000 --- --- --- --- 045374 00000 ------------ G 0.95 0.65 0.81 A 0.05 0.35 0.19 0000 --- --- --- --- 045561 01379 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0296 GAC CAC ASP(D) HIS(H) 046529 00000 ------------ A 1.00 0.70 0.84 G 0.00 0.30 0.16 0000 --- --- --- --- 046750 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 046880 00000 ------------ C 0.64 1.00 0.82 G 0.36 0.00 0.18 0000 --- --- --- --- 047496 00000 ------------ G 0.95 0.76 0.86 C 0.05 0.24 0.14 0000 --- --- --- --- 047924 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 048066 00000 ------------ C 0.58 0.93 0.75 G 0.42 0.07 0.25 0000 --- --- --- --- 048123 00000 ------------ - 0.04 0.02 0.03 + 0.96 0.98 0.97 0000 --- --- --- --- 052952 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 053183 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 053249 00000 ------------ A 1.00 0.61 0.81 T 0.00 0.39 0.19 0000 --- --- --- --- 053458 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 053887 00000 ------------ C 1.00 0.59 0.80 G 0.00 0.41 0.20 0000 --- --- --- --- 054185 00000 ------------ C 0.03 0.93 0.51 T 0.97 0.07 0.49 0000 --- --- --- --- 058749 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 058867 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 059360 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 059365 00000 ------------ A 0.15 1.00 0.58 G 0.85 0.00 0.42 0000 --- --- --- --- 059387 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 059539 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 059804 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 060000 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 060021 00000 ------------ C 0.52 1.00 0.76 T 0.48 0.00 0.24 0000 --- --- --- --- 060042 00000 ------------ A 0.31 1.00 0.65 G 0.69 0.00 0.35 0000 --- --- --- --- 060632 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 060793 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 060960 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 061289 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 061300 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 061602 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 061890 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 061906 00000 ------------ A 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 061992 00000 ------------ T 1.00 0.93 0.96 C 0.00 0.07 0.04 0000 --- --- --- --- 062000 00000 ------------ C 0.11 1.00 0.60 T 0.89 0.00 0.40 0000 --- --- --- --- 062112 00000 ------------ G 1.00 0.61 0.80 A 0.00 0.39 0.20 0000 --- --- --- --- 062804 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 062808 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 063057 02075 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0528 GCA ACA ALA(A) THR(T) 063162 00000 ------------ T 0.96 0.52 0.74 C 0.04 0.48 0.26 0000 --- --- --- --- 063431 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 063521 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 063528 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 063684 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 063825 00000 ------------ - 0.08 0.05 0.07 + 0.92 0.95 0.93 0000 --- --- --- --- 063969 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 064029 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 064656 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 064658 00000 ------------ T 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 064946 00000 ------------ C 0.52 1.00 0.76 T 0.48 0.00 0.24 0000 --- --- --- --- 065267 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 065423 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065553 00000 ------------ T 0.15 1.00 0.60 C 0.85 0.00 0.40 0000 --- --- --- --- 065559 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 065841 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 065871 00000 ------------ A 0.15 0.93 0.53 G 0.85 0.07 0.47 0000 --- --- --- --- 066528 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 066565 00000 ------------ T 0.64 1.00 0.82 A 0.36 0.00 0.18 0000 --- --- --- --- 067199 00000 ------------ C 0.54 1.00 0.77 T 0.46 0.00 0.23 0000 --- --- --- --- 067275 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 068559 02678 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 069637 03756 3' UTR A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 070306 04425 3' UTR T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 071466 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 071599 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 072079 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000324: T 001005: TCAC 018483: T 038230: AA 048123: AG 063528: T 063825: T