ABCG2 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
TCTATGTATA GGGTTTTGAT TTGTTTTTAC TTTGCATAAT TACAGAATGC
50
TATATTCAAC TAAGTATCCA TTTTTAAAAA TGTGCTTCAT ATCAGTTTCG
100
TGTGTGTTTT CTCCATTTTT GTTCAGTCTC CTCCTGTAGT GCCTTCAGAT
150
CTTGCTGGAA ATGTTTTCAT TTTTTCTGGT ATCATAAAAT TTTATTCTTT
200
TCACTTATCT GGGTGAGCTA AAAAGAAAAT TAAAATAAAA TTTATTTTTC
250
GGAGATTTTT CAGTTTTTGC AAACAGTC
A
T TAACGGCCAG GTCTGAAAAC
300 |
var(279):[G:0.13]
TTTATCTTAA
T
T
T
T
T
T
T
T
T
T
T
T
T
T
C
T
T
G
A
G
A
C
A
G
A
G
T
C
T
C
A
C
T
C
T
G
T
G
G
C
350 |
REPEAT
|
var(324):[:0.89]
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
T
G
G
G
A
T
C
T
C
G
G
G
T
C
A
T
T
T
G
C
A
A
C
C
T
C
T
G
C
C
T
400
C
C
T
G
T
G
T
T
C
A
A
G
C
G
C
T
T
C
T
T
G
T
T
C
C
T
T
A
G
C
C
T
C
G
C
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
450 |
var(413):[T:0.05]
C
A
G
C
C
T
C
G
C
C
A
C
C
A
C
A
C
C
C
A
G
C
T
A
A
C
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
G
C
A
G
G
500 |
var(467):[T:0.02]
G
T
T
T
C
A
C
C
A
T
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
C
G
A
A
C
T
C
C
T
G
G
C
C
T
C
A
A
G
T
G
A
T
C
550
T
G
C
C
T
G
C
G
T
C
A
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
A
T
G
A
G
C
C
A
C
C
G
T
600
G
C
T
G
G
C
C
TTA ATTTTGTCTT AAAATGAAGT ATGACTAACA TGTATTTCTA
650
TATGGGCCTT TAAGGGTCTT GAAACTGACA GAAATTAATT CAAAAGAATA
700
ATTTTACCCA AATGTTTGGG CGCATCATGA ATATATACCT TAAAATTCTT
750
TTAAAAAGCA TGCGGTATGG TATATTTAAA ATTCTTTTTA AAAAATTATG
800
TATAGTCAAT TTTCTTATCT AGGCTTCCTA GCTAAAACTT TCCTGCATTG
850
GGTGAACCAT TAATAGTTAT TCCTAGTGTT GATTTAAACA ACTTAAATGA
900
TACTATGATT TTTGTTTGTA AATGCAAACC AGAAAATATC TGCATGCAGG
950
TACTAATTTC CTAGGGTAGA TGCAGCAGGT AGATGTTGGG ATGGCTACAC
1000
TCAC
T
C
A
C
AA AGCCTGATGG CCCGTTTCCT GAAC
A
TGC
G
C AATCACTTTC
1050 |
var(1005):[:0.73]
|
var(1035):[G:0.13]
|
var(1039):[A:0.01]
TAGCCTTTCC ACACCATCGG AATATTGCAC AGAAGTATGT CAGTCACAGG
1100
AGTGTAAAGA ATAACATTTA AACTATGGTA ATATTTTCAT TCAGTAAGTT
1150
TCTCCCCTTT CCTTCCTTGG GTTAGATTCA GTGCCTGATT TTTTTAGGCC
1200
CTGGGGCGCA AGCATCCACT TTCTCAGAAT CCCATTCACC AGAAACCACC
1250
CATTTAACTT GCTCTGGGTG CGAGCAGCGC TTGTGACTGG GCAACCTGTG
1300
CGTCAGCGTC CCCGGTGCTT CGG
C
GCTCCG GCCAGTGACG GCGACCAAAC
1350 |
var(1324):[A:0.02]
CCAGCTAGGT CAGACGAGGT ACT
G
ATCAGC CCAATGAGCG CCTGGTGATT
1400 |
var(1374):[C:0.01]
CTCGTAGTTA ATCACTCTGG TTCATTCCGT TCGATCCCGG AGGCGGGAGT
1450
GTTTGGCTTG TCCCTGCGTG TCACGGCAGG GTGACCCTAG CCCCGAGGGA
1500
GGGCGGTGGT ACCAGTCCTG CTGGCGGCTC AGCGCGGCAG GACACGTGTG
1550
CGCTTTCAGC CGGGTCGCAG GGCGCTTATC GCGGCCCGGC AGTCGGGGCC
1600
ACGCCTCACC CCCGCCCGCG AACCCCGACC TGGGGAAACC CGGGGCGCTG
1650
GGGAGGGGCC ACTGCGTTCA GCTCTGGCGG TCCACAGCCC GAAGCGCGGC
1700
TTAGGAAGTT CGT
G
T
C
A
G
C
G
C
T
G
C
C
T
G
A
G
C
T
C
G
T
C
C
C
C
T
G
G
A
T
G
T
C
C
G
G
G
1750 | Exon 1 |
UTR
T
C
T
C
C
C
C
A
G
G
C
G
G
C
C
A
C
C
C
G
C
C
G
G
C
T
C
C
C
A
T
C
G
T
G
A
C
C
T
C
C
A
G
C
C
G
C
A
G
C
1800
G
C
C
T
C
C
C
A
C
G
C
C
G
G
C
C
G
C
C
G
C
G
C
G
A
G
G
G
G
A
G
C
G
C
T
C
G
G
G
C
G
C
G
C
C
G
G
G
T
G
1850
T
G
G
T
T
G
G
G
G
G
A
A
G
G
G
G
T
T
G
T
G
C
C
G
C
G
C
G
C
G
G
G
C
T
G
C
G
T
G
C
T
G
T
G
C
C
C
A
C
T
1900
C
A
A
A
A
G
G
T
T
C
C
G
G
G
C
G
C
G
C
A
G
G
A
G
G
G
A
A
G
A
G
G
C
A
G
T
G
C
C
C
G
C
C
A
C
T
C
C
C
A
1950
C
T
G
A
G
A
T
T
G
A
G
A
G
A
C
G
C
G
G
C
A
A
G
G
A
G
G
C
A
G
C
C
T
G
T
G
G
A
G
G
A
A
C
T
G
G
G
T
A
G
2000
G
A
T
T
T
A
G
G
A
A
C
G
C
A
C
C
G
T
G
C
A
C
A
T
G
C
T
T
G
G
T
G
G
T
C
T
T
G
T
T
A
A
G
T
G
G
A
A
A
C
2050
T
G
C
T
G
C
T
T
T
A
G
A
G
T
T
T
G
T
T
T
G
G
A
A
G
G
T
C
C
G
G
G
T
G
A
C
T
C
A
T
C
C
C
A
A
C
A
T
T
T
2100
A
C
A
T
C
C
T
T
A
A
T
T
G
T
T
A
A
A
G
C
G
C
T
G
C
C
T
C
C
G
A
G
C
G
C
A
C
G
C
A
T
C
C
T
G
A
G
A
T
C
2150
C
T
G
A
G
C
C
T
T
T
G
G
T
T
A
A
G
A
C
C
G
A
G
C
T
C
T
A
T
T
A
A
G
C
T
G
A
GTG AGTAAATTGT
2200
AAAACCAGTT TCGCTGAGAG TGTGTGTCTG GAAAGGTTGG TGGGCGTTGT
2250
GTATATATTT GTTAGAAAAT CGGTAACCGT TCAAACGAGA CGACTGAGTT
2300
TTTTAGCCTT TCGCAGTTTC ATTTGAAAGT GGGTATGC
A
G TTTAAAACTG
2350 |
var(2339):[G:0.28]
ACAGTTCAAA GTGGTTTTTC AGAAAATGAT GCCCTGGTGC AAACTGATTC
2400
TGGGTCCCAT AGTGTGTTAA GTGTGGGTTG GTAAAAACTC TTGGCCTTTC
2450
TCCAAATG
T
A TGAAATTAAA GTTGATATTG GAAGGATAAA AACCCACTGA
2500 |
var(2459):[C:0.01]
GCACAGAAGT TACTATAGGT GGAGGAAACA TTTGTTGATG TTAATATTTT
2550
AAAGGGGTTG ACCAATATAG GAATTGGTCA ATGACAATTG GGAATAGGTA
2600
AATGACAAAT TATTGGTCAA TCCCTTTAAA GCTTTGGATG GTTTGCTAAA
2650
GAATTATTGA ACTCCCTTTT GTAATTTTCT GTGGATAGTT GAGTGCTCTT
2700
ACTCCCTTCT CAGTCCTAGA GATATCCCCT AAAGCTTGGT TTTTAGGAGG
2750
ATCTTACAGC TCTCTTATCA TTTGAATGTC AGCTAGTCAT AAATAAATAC
2800
G
CCAGAGTAG TAAGGAAGAG ATGTTTTTTA TTGATATTCT TTACAAAACA
2850 |
var(2801):[A:0.16]
GTGCTTTCAG AGTA
C
AGCTT TGACTGGATT GTATAGATCT TGATGAGATC
2900 |
var(2865):[A:0.01]
TTGATGAGAA AGGTTTCAAC GACAAAGATG GCATGTTAAG TCTAACATTA
2950
CCCTTCCATT ATAAACATTG AAAGATGTTG GTTATTTTAT TATTTA
T
T
T
T
3000 |
REPEAT
A
T
A
A
T
A
A
C
T
T
T
T
A
A
T
T
G
T
G
A
A
A
T
A
A
T
T
T
G
A
G
A
G
T
T
A
C
T
G
A
A
A
A
T
T
T
G
C
A
A
3050
A
A
A
A
T
A
G
T
A
C
A
G
A
G
A
G
T
T
C
C
C
A
T
A
A
T
A
T
C
A
T
G
C
A
T
A
A
C
A
A
G
G
G
C
C
A
A
A
A
C
3100 |
NOT SCANNED
T
A
A
T
A
A
C
A
T
G
G
G
C
A
T
G
C
T
A
C
T
A
T
A
A
T
A
C
A
A
T
G
A
A
C
T
A
A
A
C
T
A
C
A
G
A
C
T
T
T
3150
A
T
T
T
G
G
A
T
T
T
C
A
C
T
T
G
T
C
T
T
T
C
C
A
C
T
G
T
C
C
T
T
T
T
T
C
T
G
C
C
C
A
G
G
A
T
C
C
A
A
3200
T
C
G
A
T
G
A
T
C
T
C
A
C
T
T
T
G
C
A
T
T
T
A
A
C
T
G
C
T
A
A
A
T
A
T
C
C
T
T
A
A
T
T
T
T
C
T
C
T
G
3250
A
T
C
T
G
T
G
A
C
A
G
T
T
C
C
T
C
A
G
C
C
T
T
T
C
A
T
T
G
T
T
T
T
T
T
C
A
T
G
G
A
C
C
T
T
G
A
C
A
C
3300
T
A
G
T
G
A
A
G
A
A
G
A
C
C
C
G
G
T
C
A
G
T
T
A
A
T
T
T
G
T
A
G
A
A
T
G
C
C
C
C
T
C
A
A
T
T
T
G
T
G
3350
T
T
T
G
C
T
T
G
A
T
G
T
T
T
A
G
T
G
T
C
A
T
G
A
T
T
A
G
A
T
G
A
A
T
G
T
T
C
T
G
C
A
T
T
T
T
G
G
G
G
3400
A
A
A
A
A
T
G
T
C
A
C
A
G
A
A
G
T
A
A
A
G
T
T
T
C
C
A
T
C
T
C
A
G
T
A
T
G
T
C
A
T
A
T
T
G
G
G
T
A
C
3450
A
T
G
A
T
G
T
C
A
A
T
A
C
T
T
T
T
T
T
T
T
G
A
G
A
C
T
G
A
G
T
C
T
T
G
C
T
T
T
A
T
T
G
C
C
C
A
G
A
C
3500 |
REPEAT
T
G
G
A
G
T
G
C
A
G
T
G
G
C
A
C
G
A
T
C
T
C
A
G
C
T
C
A
T
T
G
C
A
A
C
C
T
T
T
G
C
C
T
C
C
C
A
G
G
T
3550
T
C
T
A
G
C
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
T
G
G
G
A
T
T
A
T
A
G
G
C
G
C
3600
C
T
G
C
C
A
C
C
A
T
G
C
C
C
A
G
A
T
A
A
T
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
A
C
A
G
G
T
T
T
C
3650
A
T
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
C
G
A
A
C
T
C
C
T
G
A
C
C
T
C
T
A
G
T
G
A
T
C
C
T
C
C
T
G
C
C
3700
T
T
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
T
G
A
G
C
C
A
C
T
G
T
G
C
C
C
T
A
G
C
3750 |
REPEAT
C
G
A
T
A
C
T
T
C
T
T
A
T
T
A
C
C
T
A
T
G
A
T
G
T
T
A
A
T
C
T
G
T
T
T
G
C
C
A
G
A
T
T
C
C
C
T
T
T
G
3800
T
A
T
T
T
G
A
G
A
T
C
T
T
G
G
G
A
G
A
G
A
A
A
C
C
T
G
C
A
C
T
G
C
C
A
T
T
T
T
T
C
C
T
T
A
A
A
C
T
T
3850
T
T
A
T
T
C
A
T
T
A
A
T
T
T
A
A
G
C
A
T
C
C
A
T
T
T
G
T
G
G
A
A
C
A
T
G
T
T
G
T
T
T
A
G
C
G
G
G
T
T
3900
T
T
T
T
T
T
C
C
T
A
A
T
G
G
T
T
A
A
A
C
A
A
A
A
C
C
C
C
T
A
T
T
T
T
C
T
T
C
C
T
T
C
T
A
C
A
T
T
T
T
3950
T
T
A
A
T
T
A
A
A
A
T
T
C
C
C
T
T
C
T
G
T
A
G
G
G
A
A
G
A
G
T
T
G
A
C
C
C
T
T
C
T
C
T
C
C
T
G
T
T
C
4000
A
T
T
G
A
T
T
C
A
G
T
T
A
T
T
T
G
T
A
T
C
A
G
T
A
T
G
G
G
C
T
C
A
T
G
G
A
T
A
T
T
T
G
T
T
T
T
G
T
T
4050
A
T
A
T
G
G
G
T
T
A
T
A
A
T
C
C
A
A
T
A
T
T
A
T
C
A
G
T
A
T
T
T
A
A
T
T
T
G
C
T
G
C
T
C
A
A
A
T
T
G
4100
T
T
C
T
G
G
C
T
T
T
C
A
C
C
A
C
T
G
G
G
A
C
C
T
T
T
T
T
C
A
G
G
T
T
G
G
C
G
C
C
T
G
T
G
C
C
A
C
T
T
4150
T
G
A
C
A
T
A
C
A
C
T
T
G
C
T
T
T
T
T